Lag0028750 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0028750
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr8: 29878680 .. 29880003 (-)
RNA-Seq Expression	Lag0028750
Synteny	Lag0028750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACAGGGGAATCATCTTCTTCATCCTCCTTCACTTCTTCGACTACACCAGTGGCCTCTCCAAATATCACTCCAACTGTTACTCCGTGGTTACCCCGATACATCAGCCTCTGCATCCTTCTACACAATCTCCAAATCGCCCAATTGTTCGGCCTCAACCACCTCTTCCGCAACCTCAGCCACCGATTGCTCCTCAACCTCCTCAAACCCCAACATATCAACCCCAAACTTTCGCTCAACCCTTACCAAATTTCGCTCAACCATTTTATCCCGCCCAGTTCACACGCCCTCAATCCTTACCCCATTTTTTCCAACCTCAGAATCACTATCAACAACCTTTCGCGCCGGCGTCTTTTCCTCAACCCTCGCCTACAAATGTCCTTTTATCCTCAACCTCCATCTTTTCCTAATCCGATTGCACCCAACCCCTATCCAACTCTGCCTCAACCCCTGTCGGTCAAGCTTAATGACAATAACTTTCTCCTTTGGAAAAATCAACTGCTAAACGCTGTTTTGGCAAATGGTTTGAATGGTTTTCTCGATGGCTCTATCCCAGCTCCCAACAAATTCCTTGACGATCAGCAGCAGCAACCGAATCCAGAGTTTCTTCTTTGGGAAAGGTACAATCGTTTTATCATGTGTTGGATGTATTCCTCCTGTCTGAAGAAAAAATGGGGGAGATAGTTAGTTTTGAAACTGCTGCTGAGATATGGAACTCTTTAAAACGTTCTTATGACTCCAAAACTACTGCTAGAATCATGGGTTTAAAGACTCAACTCCAAAAATTAAGAAAGATGGTCTCTCTGTTATCCAATACCTTGCTCAAATAAAAGACGTTGCTGATAAATTCTCTGCTATAGGTGAACCTATATCTTATCGGGATCATTTAGCCTACATTTTAGATGGCCTTGGTAGTGAATACAACCCATTTGTCACTACCATTCAAAATCGTTCTGATAATCCCTCTCTTGAGGATGTTCACAGTCTTCTTTTAGCTTACGAGGCTCGGTTAGAAAAGCAAACTGCAGTTGAACAACTTAATTTGGCCCAAGTGAACCTTAGTAGTCTTCACATCCATAACAGTCGTCGTTCCTCTTCCCGACCACCTAATCAAACCTCTAGATCTCCCTTCAATCCATCTTCCTTTCCTCCATTTTCTATTTCATCTACTCCAACAGCCCCTATTTCTCAAAGTGTTTTAGGAAGACCTCAATCTCAGCCTCTACAAAAATGGTCATCTCGGCCCCCAACAAACCTCAATGCCAAATTTGTGGTAAATTTGGCCACACTGCCCTCATTTGTCACCATAGGACAAATCTAG

mRNA sequence

ATGACGACAGGGGAATCATCTTCTTCATCCTCCTTCACTTCTTCGACTACACCAGTGGCCTCTCCAAATATCACTCCAACTGTTACTCCGTGGTTACCCCGATACATCAGCCTCTGCATCCTTCTACACAATCTCCAAATCGCCCAATTGTTCGGCCTCAACCACCTCTTCCGCAACCTCAGCCACCGATTGCTCCTCAACCTCCTCAAACCCCAACATATCAACCCCAAACTTTCGCTCAACCCTTACCAAATTTCGCTCAACCATTTTATCCCGCCCAGTTCACACGCCCTCAATCCTTACCCCATTTTTTCCAACCTCAGAATCACTATCAACAACCTTTCGCGCCGGCGTCTTTTCCTCAACCCTCGCCTACAAATGTCCTTTTATCCTCAACCTCCATCTTTTCCTAATCCGATTGCACCCAACCCCTATCCAACTCTGCCTCAACCCCTGTCGGTCAAGCTTAATGACAATAACTTTCTCCTTTGGAAAAATCAACTGCTAAACGCTGTTTTGGCAAATGGTTTGAATGGTTTTCTCGATGGCTCTATCCCAGCTCCCAACAAATTCCTTGACGATCAGCAGCAGCAACCGAATCCAGAGTTTCTTCTTTGGGAAAGGTACAATCGTTTTATCATGTGTGAACCTATATCTTATCGGGATCATTTAGCCTACATTTTAGATGGCCTTGGTAGTGAATACAACCCATTTGTCACTACCATTCAAAATCGTTCTGATAATCCCTCTCTTGAGGATGTTCACAGTCTTCTTTTAGCTTACGAGGCTCGGTTAGAAAAGCAAACTGCAGTTGAACAACTTAATTTGGCCCAAGTGAACCTTAGTAGTCTTCACATCCATAACAGTCGTCGTTCCTCTTCCCGACCACCTAATCAAACCTCTAGATCTCCCTTCAATCCATCTTCCTTTCCTCCATTTTCTATTTCATCTACTCCAACAGCCCCTATTTCTCAAAGTGTTTTAGGAAGACCTCAATCTCAGCCTCTACAAAAATGGTCATCTCGGCCCCCAACAAACCTCAATGCCAAATTTGTGGTAAATTTGGCCACACTGCCCTCATTTGTCACCATAGGACAAATCTAG

Coding sequence (CDS)

ATGACGACAGGGGAATCATCTTCTTCATCCTCCTTCACTTCTTCGACTACACCAGTGGCCTCTCCAAATATCACTCCAACTGTTACTCCGTGGTTACCCCGATACATCAGCCTCTGCATCCTTCTACACAATCTCCAAATCGCCCAATTGTTCGGCCTCAACCACCTCTTCCGCAACCTCAGCCACCGATTGCTCCTCAACCTCCTCAAACCCCAACATATCAACCCCAAACTTTCGCTCAACCCTTACCAAATTTCGCTCAACCATTTTATCCCGCCCAGTTCACACGCCCTCAATCCTTACCCCATTTTTTCCAACCTCAGAATCACTATCAACAACCTTTCGCGCCGGCGTCTTTTCCTCAACCCTCGCCTACAAATGTCCTTTTATCCTCAACCTCCATCTTTTCCTAATCCGATTGCACCCAACCCCTATCCAACTCTGCCTCAACCCCTGTCGGTCAAGCTTAATGACAATAACTTTCTCCTTTGGAAAAATCAACTGCTAAACGCTGTTTTGGCAAATGGTTTGAATGGTTTTCTCGATGGCTCTATCCCAGCTCCCAACAAATTCCTTGACGATCAGCAGCAGCAACCGAATCCAGAGTTTCTTCTTTGGGAAAGGTACAATCGTTTTATCATGTGTGAACCTATATCTTATCGGGATCATTTAGCCTACATTTTAGATGGCCTTGGTAGTGAATACAACCCATTTGTCACTACCATTCAAAATCGTTCTGATAATCCCTCTCTTGAGGATGTTCACAGTCTTCTTTTAGCTTACGAGGCTCGGTTAGAAAAGCAAACTGCAGTTGAACAACTTAATTTGGCCCAAGTGAACCTTAGTAGTCTTCACATCCATAACAGTCGTCGTTCCTCTTCCCGACCACCTAATCAAACCTCTAGATCTCCCTTCAATCCATCTTCCTTTCCTCCATTTTCTATTTCATCTACTCCAACAGCCCCTATTTCTCAAAGTGTTTTAGGAAGACCTCAATCTCAGCCTCTACAAAAATGGTCATCTCGGCCCCCAACAAACCTCAATGCCAAATTTGTGGTAAATTTGGCCACACTGCCCTCATTTGTCACCATAGGACAAATCTAG

Protein sequence

MTTGESSSSSSFTSSTTPVASPNITPTVTPWLPRYISLCILLHNLQIAQLFGLNHLFRNLSHRLLLNLLKPQHINPKLSLNPYQISLNHFIPPSSHALNPYPIFSNLRITINNLSRRRLFLNPRLQMSFYPQPPSFPNPIAPNPYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLDGSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMCEPISYRDHLAYILDGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEARLEKQTAVEQLNLAQVNLSSLHIHNSRRSSSRPPNQTSRSPFNPSSFPPFSISSTPTAPISQSVLGRPQSQPLQKWSSRPPTNLNAKFVVNLATLPSFVTIGQI

Homology

[Close]

BLAST of Lag0028750 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 223.8 bits (569), Expect = 2.5e-54
Identity = 138/299 (46.15%), Postives = 167/299 (55.85%), Query Frame = 0


Query: 127 MSFYPQPPSF----PNPIAPNPYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLD 186
           M F P  P+F    PNP + NP+PTLPQPL+VKLNDNNFLLWKNQLLNAV+ANGL G+LD
Sbjct: 1   MQFPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLD 60

Query: 187 GSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC--------------------------- 246
           G+I  P +FLD  Q QPNP +  WERYNR +MC                           
Sbjct: 61  GTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSL 120

Query: 247 -----------------------------------------------EPISYRDHLAYIL 306
                                                          EP+SYRDHLA++L
Sbjct: 121 TRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVL 180

Query: 307 DGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEARLEKQTAVEQLNLAQVNLSSLHI-H 347
           DGLGSEYN FVT+I NR+D+PSLEDV SLLLAYEARL+KQ  V+QLN+AQ NL +L + H
Sbjct: 181 DGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQH 240

[Close]

BLAST of Lag0028750 vs. NCBI nr
Match: GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])

HSP 1 Score: 143.3 bits (360), Expect = 4.2e-30
Identity = 87/231 (37.66%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 131 PQPP--------SFPNP----IAPNPYPTLP---QPLSVKLNDNNFLLWKNQLLNAVLAN 190
           P PP        S PNP    +  +P P +P   QPL+VKL+D+N+++WK QLLN V+AN
Sbjct: 15  PPPPTSNPLPSSSIPNPNPQILNTSPLPNMPSINQPLAVKLDDHNYIIWKEQLLNIVIAN 74

Query: 191 GLNGFLDGSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC-------------------- 250
           GL  FLDGS   P +FLD QQQQ NPEF  W+RYNR +M                     
Sbjct: 75  GLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSA 134

Query: 251 ------------------------------------------------------EPISYR 273
                                                                 EP++Y 
Sbjct: 135 SQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYT 194

[Close]

BLAST of Lag0028750 vs. NCBI nr
Match: CAN63649.1 (hypothetical protein VITISV_037657 [Vitis vinifera])

HSP 1 Score: 129.8 bits (325), Expect = 4.8e-26
Identity = 71/187 (37.97%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 141 APNPYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLDGSIPAPNKFLDDQQQQPN 200
           A +  P+L Q  +V+L+ +N+LLW+ Q+LN ++ANGL   + G I AP++FL D  +  N
Sbjct: 18  AHHTMPSLNQAFTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIXAPSRFLGD-SENIN 77

Query: 201 PEFLLWERYNRFIMC---------------EPISYRDHLAYILDGLGSEYNPFVTTIQNR 260
           PE+ +W+R NR +MC               E I+ +D + Y+L GL +EYN FV T+ +R
Sbjct: 78  PEYSIWQRQNRLVMCWIYSSLTEDNLLAIGENITEQDRILYLLAGLRAEYNSFVITVTSR 137

Query: 261 SDNPSLEDVHSLLLAYEARLEKQTAVEQLNLAQVNLSSLHI--HNSRRSSSRPPNQTSRS 311
            +  SLE++HS+LL +E RLE+Q   E+ NL Q N+++++I  HN +   S       R 
Sbjct: 138 HEPLSLEEIHSMLLTHENRLEQQHTTEETNLLQANITTMNIQGHNKKNQKSGQFKTQGRG 197

[Close]

BLAST of Lag0028750 vs. NCBI nr
Match: PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])

HSP 1 Score: 129.0 bits (323), Expect = 8.2e-26
Identity = 98/308 (31.82%), Postives = 140/308 (45.45%), Query Frame = 0


Query: 122 NPRLQMSFYPQPPSFPN----------PIAPNP-YPTLPQPLSVKLNDNNFLLWKNQLLN 181
           NP +QM     P + PN          P+ P P  P++ QP ++KL+ +N+L+WKNQLLN
Sbjct: 15  NPTIQM----PPTNIPNVQDQIIGAQPPLPPLPILPSMNQPFTIKLDADNYLIWKNQLLN 74

Query: 182 AVLANGLNGFLDGSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC--------------- 241
            ++ANGL  F+DGS P P +F D  +Q  N E++ W+R+NR IM                
Sbjct: 75  VIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIV 134

Query: 242 -----------------------------------------------------------E 301
                                                                      E
Sbjct: 135 GYASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGE 194

Query: 302 PISYRDHLAYILDGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEARLEKQTAVEQLNL 339
           P+S +DHL Y+  GL  EYN FVT+I  R DN  LE+++SLLL+YE RLE Q A  QL+ 
Sbjct: 195 PVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQLSS 254

[Close]

BLAST of Lag0028750 vs. NCBI nr
Match: RVX04814.1 (hypothetical protein CK203_024917 [Vitis vinifera])

HSP 1 Score: 116.3 bits (290), Expect = 5.5e-22
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 144 PYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLDGSIPAPNKFLDDQQQQPNPEF 203
           P P+L QPLS+KL++ N LLW NQL+N ++ANGL  F++     P K+LD  ++Q NP+F
Sbjct: 32  PSPSLSQPLSIKLDETNLLLWNNQLINVIIANGLEDFINPDQSNPPKYLDAARRQVNPKF 91

Query: 204 LLWERYNRFIMCEPISYRDHLAYILDGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEA 263
           + WER N          R+ L  I +GL  +Y+ FVT+I NR D PS ++VHSLL  YE+
Sbjct: 92  VQWERLN----------RNKLTRIPEGLPEKYDSFVTSIHNRYDRPSFQEVHSLLHPYES 143

Query: 264 RL 266
           RL
Sbjct: 152 RL 143

[Close]

BLAST of Lag0028750 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 138/299 (46.15%), Postives = 167/299 (55.85%), Query Frame = 0


Query: 127 MSFYPQPPSF----PNPIAPNPYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLD 186
           M F P  P+F    PNP + NP+PTLPQPL+VKLNDNNFLLWKNQLLNAV+ANGL G+LD
Sbjct: 1   MQFPPPTPNFLAQPPNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLD 60

Query: 187 GSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC--------------------------- 246
           G+I  P +FLD  Q QPNP +  WERYNR +MC                           
Sbjct: 61  GTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSL 120

Query: 247 -----------------------------------------------EPISYRDHLAYIL 306
                                                          EP+SYRDHLA++L
Sbjct: 121 TRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVL 180

Query: 307 DGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEARLEKQTAVEQLNLAQVNLSSLHI-H 347
           DGLGSEYN FVT+I NR+D+PSLEDV SLLLAYEARL+KQ  V+QLN+AQ NL +L + H
Sbjct: 181 DGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQH 240

[Close]

BLAST of Lag0028750 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-30
Identity = 87/231 (37.66%), Postives = 114/231 (49.35%), Query Frame = 0


Query: 131 PQPP--------SFPNP----IAPNPYPTLP---QPLSVKLNDNNFLLWKNQLLNAVLAN 190
           P PP        S PNP    +  +P P +P   QPL+VKL+D+N+++WK QLLN V+AN
Sbjct: 15  PPPPTSNPLPSSSIPNPNPQILNTSPLPNMPSINQPLAVKLDDHNYIIWKEQLLNIVIAN 74

Query: 191 GLNGFLDGSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC-------------------- 250
           GL  FLDGS   P +FLD QQQQ NPEF  W+RYNR +M                     
Sbjct: 75  GLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSA 134

Query: 251 ------------------------------------------------------EPISYR 273
                                                                 EP++Y 
Sbjct: 135 SQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYT 194

[Close]

BLAST of Lag0028750 vs. ExPASy TrEMBL
Match: A5BMF5 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037657 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-26
Identity = 71/187 (37.97%), Postives = 110/187 (58.82%), Query Frame = 0


Query: 141 APNPYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLDGSIPAPNKFLDDQQQQPN 200
           A +  P+L Q  +V+L+ +N+LLW+ Q+LN ++ANGL   + G I AP++FL D  +  N
Sbjct: 18  AHHTMPSLNQAFTVRLDQSNYLLWRTQMLNIIIANGLEEMIHGKIXAPSRFLGD-SENIN 77

Query: 201 PEFLLWERYNRFIMC---------------EPISYRDHLAYILDGLGSEYNPFVTTIQNR 260
           PE+ +W+R NR +MC               E I+ +D + Y+L GL +EYN FV T+ +R
Sbjct: 78  PEYSIWQRQNRLVMCWIYSSLTEDNLLAIGENITEQDRILYLLAGLRAEYNSFVITVTSR 137

Query: 261 SDNPSLEDVHSLLLAYEARLEKQTAVEQLNLAQVNLSSLHI--HNSRRSSSRPPNQTSRS 311
            +  SLE++HS+LL +E RLE+Q   E+ NL Q N+++++I  HN +   S       R 
Sbjct: 138 HEPLSLEEIHSMLLTHENRLEQQHTTEETNLLQANITTMNIQGHNKKNQKSGQFKTQGRG 197

[Close]

BLAST of Lag0028750 vs. ExPASy TrEMBL
Match: A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 4.0e-26
Identity = 98/308 (31.82%), Postives = 140/308 (45.45%), Query Frame = 0


Query: 122 NPRLQMSFYPQPPSFPN----------PIAPNP-YPTLPQPLSVKLNDNNFLLWKNQLLN 181
           NP +QM     P + PN          P+ P P  P++ QP ++KL+ +N+L+WKNQLLN
Sbjct: 15  NPTIQM----PPTNIPNVQDQIIGAQPPLPPLPILPSMNQPFTIKLDADNYLIWKNQLLN 74

Query: 182 AVLANGLNGFLDGSIPAPNKFLDDQQQQPNPEFLLWERYNRFIMC--------------- 241
            ++ANGL  F+DGS P P +F D  +Q  N E++ W+R+NR IM                
Sbjct: 75  VIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIV 134

Query: 242 -----------------------------------------------------------E 301
                                                                      E
Sbjct: 135 GYASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGE 194

Query: 302 PISYRDHLAYILDGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEARLEKQTAVEQLNL 339
           P+S +DHL Y+  GL  EYN FVT+I  R DN  LE+++SLLL+YE RLE Q A  QL+ 
Sbjct: 195 PVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQLSS 254

[Close]

BLAST of Lag0028750 vs. ExPASy TrEMBL
Match: A0A438J785 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_024917 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-22
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 144 PYPTLPQPLSVKLNDNNFLLWKNQLLNAVLANGLNGFLDGSIPAPNKFLDDQQQQPNPEF 203
           P P+L QPLS+KL++ N LLW NQL+N ++ANGL  F++     P K+LD  ++Q NP+F
Sbjct: 32  PSPSLSQPLSIKLDETNLLLWNNQLINVIIANGLEDFINPDQSNPPKYLDAARRQVNPKF 91

Query: 204 LLWERYNRFIMCEPISYRDHLAYILDGLGSEYNPFVTTIQNRSDNPSLEDVHSLLLAYEA 263
           + WER N          R+ L  I +GL  +Y+ FVT+I NR D PS ++VHSLL  YE+
Sbjct: 92  VQWERLN----------RNKLTRIPEGLPEKYDSFVTSIHNRYDRPSFQEVHSLLHPYES 143

Query: 264 RL 266
           RL
Sbjct: 152 RL 143

The following BLAST results are available for this feature:

BLAST of Lag0028750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155181.1	2.5e-54	46.15	uncharacterized protein LOC111022315 [Momordica charantia]	[more]
GFY85402.1	4.2e-30	37.66	hypothetical protein Acr_04g0001400 [Actinidia rufa]	[more]
CAN63649.1	4.8e-26	37.97	hypothetical protein VITISV_037657 [Vitis vinifera]	[more]
PON47862.1	8.2e-26	31.82	hypothetical protein TorRG33x02_321990 [Trema orientale]	[more]
RVX04814.1	5.5e-22	47.54	hypothetical protein CK203_024917 [Vitis vinifera]	[more]

BLAST of Lag0028750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0028750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQX7	1.2e-54	46.15	uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A7J0EGI5	2.0e-30	37.66	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1	[more]
A5BMF5	2.3e-26	37.97	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_037657 PE=4 SV=1	[more]
A0A2P5BGF8	4.0e-26	31.82	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV...	[more]
A0A438J785	2.7e-22	47.54	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_024917 PE=4 SV=1	[more]

BLAST of Lag0028750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 152..189 e-value: 9.8E-7 score: 28.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 219..303
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 160..214
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 219..303
None	No IPR available	PANTHER	PTHR34222:SF48	SUBFAMILY NOT NAMED	coord: 160..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0028750.1	Lag0028750.1	mRNA