Lag0028742 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGTTTTTCAGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCTTCTTTCTTGATCATGGCTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGCCACGAAGCCGCGGCGGCGGCCAGGCCGTTACCGGAAAATCAAAATCCAGAGGGAAGCCATGTCGGCGGCGGCGGCGGAAGCAGGGAGAAGCTCCTCCGGAAGTATTTCAATGGAAGGAGTTTTAGTTCGAGAGGGTTTCAAGAGAGCAAACGAACAGTGCCGAGCTGCCCCGATCCCCTCCACAACTAG ATGGTGGTTTTTCAGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCTTCTTTCTTGATCATGGCTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGCCACGAAGCCGCGGCGGCGGCCAGGCCGTTACCGGAAAATCAAAATCCAGAGGGAAGCCATGTCGGCGGCGGCGGCGGAAGCAGGGAGAAGCTCCTCCGGAAGTATTTCAATGGAAGGAGTTTTAGTTCGAGAGGGTTTCAAGAGAGCAAACGAACAGTGCCGAGCTGCCCCGATCCCCTCCACAACTAG ATGGTGGTTTTTCAGGCAATGTGCGGCGGCGCCACTCCCACACGGCGGCGGCGATTTCTCTCTTCTTTCTTGATCATGGCTTTCTTCATCTGGGTCGTCTTCTGCCACCACCGCCACGAAGCCGCGGCGGCGGCCAGGCCGTTACCGGAAAATCAAAATCCAGAGGGAAGCCATGTCGGCGGCGGCGGCGGAAGCAGGGAGAAGCTCCTCCGGAAGTATTTCAATGGAAGGAGTTTTAGTTCGAGAGGGTTTCAAGAGAGCAAACGAACAGTGCCGAGCTGCCCCGATCCCCTCCACAACTAG MVVFQAMCGGATPTRRRRFLSSFLIMAFFIWVVFCHHRHEAAAAARPLPENQNPEGSHVGGGGGSREKLLRKYFNGRSFSSRGFQESKRTVPSCPDPLHN Homology
BLAST of Lag0028742 vs. NCBI nr
Match: KAG6579278.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.1 bits (396), Expect = 7.7e-35 Identity = 77/102 (75.49%), Postives = 81/102 (79.41%), Query Frame = 0
BLAST of Lag0028742 vs. NCBI nr
Match: KAG7016789.1 (hypothetical protein SDJN02_21899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.0 bits (380), Expect = 5.5e-33 Identity = 73/93 (78.49%), Postives = 77/93 (82.80%), Query Frame = 0
BLAST of Lag0028742 vs. NCBI nr
Match: KAG6601785.1 (CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032500.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28 Identity = 66/94 (70.21%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Lag0028742 vs. NCBI nr
Match: KAA0063931.1 (putative Clavata3/esr-related 43 [Cucumis melo var. makuwa]) HSP 1 Score: 99.4 bits (246), Expect = 1.9e-17 Identity = 55/91 (60.44%), Postives = 64/91 (70.33%), Query Frame = 0
BLAST of Lag0028742 vs. NCBI nr
Match: KAB1221059.1 (CLAVATA3/ESR (CLE)-related protein 43 [Morella rubra]) HSP 1 Score: 62.0 bits (149), Expect = 3.4e-06 Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0
BLAST of Lag0028742 vs. ExPASy Swiss-Prot
Match: Q9LUA1 (CLAVATA3/ESR (CLE)-related protein 27 OS=Arabidopsis thaliana OX=3702 GN=CLE27 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 4.3e-04 Identity = 30/83 (36.14%), Postives = 39/83 (46.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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