Lag0028042 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0028042
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	AA_kinase domain-containing protein
Location	chr8: 11364271 .. 11366344 (-)
RNA-Seq Expression	Lag0028042
Synteny	Lag0028042

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGAGAACAAGTACAAACAGCGAGGTAAGCAAGTTCAAATCTGAAATGTCTGAGCTTAAGACTCTCATTAATCAGTTGGCTGCAGAAAAGGAATCACCGTCTAAGCACAATACATATGATGGATTTCCATCGATGCAAAGCCAACAGACACCAAAGCATTACTACCAGAACAATCAAAGCCTGAAACTGCAACATGGATCAAACTCAGGAATTTATCTGATGGCATTCGAGCTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGACCAGAACTGAGATGCAGCAAAATCACAATTGAGAGCCCAAGTTTCTCAGTTGGCTTAATTTGGCCTCCAACTTTCTGACGGTGTTGAAGCGATTTTATTGAAGATTTGGGCGGTTTTTCACCTTCAAGAGTGGGTAAACGCGATTTTCACCTTCTTCTTCTTGTCTTTGTTAATTCTTCCATGTTTAGAAGCATAAGATTGAGATTAGAAGTTGCATAGGCTTTATTTGAGCGTTATTTCTACATTGTCTAGCTGAAAATCGTTGAGAAATCGTTGTTGTTGTTGTATTTTTATCGATTGTTCAATTTCTCTGCTATTCTTATTGTGATTTTGCTGTTTGGTAGGGTAAATTTTGTTTATATAGGAGGAAGGGCATTTAAGTGTTGGAGTTTTTGGACCTTTAATCTTAAATTCTTAGTTTTCTTAAGTTTCCAACTCATTTTAGATTTTTTTTAGGAGCCCCTTTTTTCCATTCCATTTAGATTTTTATGCTATTCCTACCCATTCCACCGTGAATGCCAAGAGATCTAGGAGATCAGCAACTTCTTCATCCTCTGCTCCCTTTGATAGGAGAAGATTTATTAACAAGGAGGCTGAAGATGTATATAATTCGTACGTGGTAAGTAGGGGGATAGTACCTGAAAGAGGGTTAGTTCCAAGTGCCCAAAATCAACCTGAGCTAACCCATAGTATAGCTGAGAGAGGTTGGGGAACGTTCACTAGGACCCCCAGGCCACTGTAGTCCCTATCGTTAGGGAATTTTATGTTAACATGATGGAAGGATCCACTACTTCCATTGTTAGGGGTAAAACAATCCCTTTCAACTCGGCCTCTATTAACCTGTTCTATGGCCTTCCCGACATTGATAGGGATGGGTACAATGATTATGCAAGTAATCACTTTAATTCCCATCAAATTATTGAGCATCTATGTAGGCCAGGGGCAACTTGGTTAATAGGAAGGGGGGAGCAATAAACTTTAAATCCTCTGATCTGACAGTGGATAACAAAGCATGGCATAGTTTTCTGTGTGCCAAACTCTTACCTGTGATGCATATGAGTGATGTAACAAAGGAAAGAGCAGCTCTGTTATTCTCTATGGCTACCGGTCGCAGTATAGACGTAGGAAAAGTTATATATTCTTCCATGTGTCGGATTCGCAAAGGAGCGACCACCGTAGGTCTAAGGCACCCTTCCCTCATCACAGCACTCTACAGAGCTGCTGGGGTCGTGTGGGACCCCGTGAGGAGATTAGCCATCTTGCATCTGCGATTGATGGGAACTTTATTATGAATAGATTTCGAGAGCCCGAACCTAGGATAACTCACCATCCACCTCCACCCACCTCCACCCAACAGGAAGAGCTACAAGAGGAGCCCCAAGCTCAGGGAGAGCAGCCCCACTTCGATCATCCTCCTCTGACGCTTGAGTCGTTAGATGAGAGGATGAATAAGATGGGACTTGAGCAGCTGCGCTACAATGAGAGCCAGCAGCATTGGGAGCGAAGACACTTTAGAAGGACTGAGGACCAGTTCGTCTATATTCGAGAGTATATCATGGCCTCTCGACGTCTGGACAACCCATCCCACCACCGCTGCCACCTTATGAGTCTCCTGGGGATGAGGAGGGATGCACTATCATGCAGGCTCATCTGCAGTTTTTTCTATCCTTTCCTTTATTTTCTTTATTTTATTTTTTTAGTTTGTTCTGTTTTTATTTTTCTTGTTTTGTCTGTTTTCTTTTTTGTAGATTTTGACAAAATTAATATGAGGGCATTCAATTTTGATCTAGCCAACTCCTGA

mRNA sequence

ATGGCTGAGAGAACAAGTACAAACAGCGAGGTAAGCAAGTTCAAATCTGAAATGTCTGAGCTTAAGACTCTCATTAATCAGTTGGCTGCAGAAAAGGAATCACCGTCTAAGCACAATACATATGATGGATTTCCATCGATGCAAAGCCAACAGACACCAAAGCATTACTACCAGAACAATCAAAGCCTGAAACTGCAACATGGATCAAACTCAGGAATTTATCTGATGGCATTCGAGCTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGACCAGAACTGAGATGCAGCAAAATCACAATTGAGAGCCCAAATTTTTATGCTATTCCTACCCATTCCACCGTGAATGCCAAGAGATCTAGGAGATCAGCAACTTCTTCATCCTCTGCTCCCTTTGATAGGAGAAGATTTATTAACAAGGAGGCTGAAGATGTATATAATTCGTACGTGGACCCCCAGGCCACTGTAGTCCCTATCGTTAGGGAATTTTATGTTAACATGATGGAAGGATCCACTACTTCCATTGTTAGGGGTAAAACAATCCCTTTCAACTCGGCCTCTATTAACCTGTTCTATGGCCTTCCCGACATTGATAGGGATGGGTACAATGATTATGCAAGAAAGAGCAGCTCTGTTATTCTCTATGGCTACCGGTCGCAGTATAGACGTAGGAAAAGTTATATATTCTTCCATGTGTCGGATTCGCAAAGGAGCGACCACCGTAGGTCTAAGGCACCCTTCCCTCATCACAGCACTCTACAGAGCTGCTGGGGTCGTGTGGGACCCCGTGAGGAGATTAGCCATCTTGCATCTGCGATTGATGGGAACTTTATTATGAATAGATTTCGAGAGCCCGAACCTAGGATAACTCACCATCCACCTCCACCCACCTCCACCCAACAGGAAGAGCTACAAGAGGAGCCCCAAGCTCAGGGAGAGCAGCCCCACTTCGATCATCCTCCTCTGACGCTTGAGTCGTTAGATGAGAGGATGAATAAGATGGGACTTGAGCAGCTGCGCTACAATGAGAGCCAGCAGCATTGGGAGCGAAGACACTTTAGAAGGACTGAGGACCAGTTCGTCTATATTCGAGAGTATATCATGGCCTCTCGACGTCTGGACAACCCATCCCACCACCGCTGCCACCTTATGAGTCTCCTGGGGATGAGGAGGGATGCACTATCATGCAGGCTCATCTGCAATTTTGACAAAATTAATATGAGGGCATTCAATTTTGATCTAGCCAACTCCTGA

Coding sequence (CDS)

ATGGCTGAGAGAACAAGTACAAACAGCGAGGTAAGCAAGTTCAAATCTGAAATGTCTGAGCTTAAGACTCTCATTAATCAGTTGGCTGCAGAAAAGGAATCACCGTCTAAGCACAATACATATGATGGATTTCCATCGATGCAAAGCCAACAGACACCAAAGCATTACTACCAGAACAATCAAAGCCTGAAACTGCAACATGGATCAAACTCAGGAATTTATCTGATGGCATTCGAGCTTTACAGGAAGGTCAACTCAAATTCCAAGAGGAGACCAGAACTGAGATGCAGCAAAATCACAATTGAGAGCCCAAATTTTTATGCTATTCCTACCCATTCCACCGTGAATGCCAAGAGATCTAGGAGATCAGCAACTTCTTCATCCTCTGCTCCCTTTGATAGGAGAAGATTTATTAACAAGGAGGCTGAAGATGTATATAATTCGTACGTGGACCCCCAGGCCACTGTAGTCCCTATCGTTAGGGAATTTTATGTTAACATGATGGAAGGATCCACTACTTCCATTGTTAGGGGTAAAACAATCCCTTTCAACTCGGCCTCTATTAACCTGTTCTATGGCCTTCCCGACATTGATAGGGATGGGTACAATGATTATGCAAGAAAGAGCAGCTCTGTTATTCTCTATGGCTACCGGTCGCAGTATAGACGTAGGAAAAGTTATATATTCTTCCATGTGTCGGATTCGCAAAGGAGCGACCACCGTAGGTCTAAGGCACCCTTCCCTCATCACAGCACTCTACAGAGCTGCTGGGGTCGTGTGGGACCCCGTGAGGAGATTAGCCATCTTGCATCTGCGATTGATGGGAACTTTATTATGAATAGATTTCGAGAGCCCGAACCTAGGATAACTCACCATCCACCTCCACCCACCTCCACCCAACAGGAAGAGCTACAAGAGGAGCCCCAAGCTCAGGGAGAGCAGCCCCACTTCGATCATCCTCCTCTGACGCTTGAGTCGTTAGATGAGAGGATGAATAAGATGGGACTTGAGCAGCTGCGCTACAATGAGAGCCAGCAGCATTGGGAGCGAAGACACTTTAGAAGGACTGAGGACCAGTTCGTCTATATTCGAGAGTATATCATGGCCTCTCGACGTCTGGACAACCCATCCCACCACCGCTGCCACCTTATGAGTCTCCTGGGGATGAGGAGGGATGCACTATCATGCAGGCTCATCTGCAATTTTGACAAAATTAATATGAGGGCATTCAATTTTGATCTAGCCAACTCCTGA

Protein sequence

MAERTSTNSEVSKFKSEMSELKTLINQLAAEKESPSKHNTYDGFPSMQSQQTPKHYYQNNQSLKLQHGSNSGIYLMAFELYRKVNSNSKRRPELRCSKITIESPNFYAIPTHSTVNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYVDPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDRDGYNDYARKSSSVILYGYRSQYRRRKSYIFFHVSDSQRSDHRRSKAPFPHHSTLQSCWGRVGPREEISHLASAIDGNFIMNRFREPEPRITHHPPPPTSTQQEELQEEPQAQGEQPHFDHPPLTLESLDERMNKMGLEQLRYNESQQHWERRHFRRTEDQFVYIREYIMASRRLDNPSHHRCHLMSLLGMRRDALSCRLICNFDKINMRAFNFDLANS

Homology

[Close]

BLAST of Lag0028042 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 5.2e-08
Identity = 43/133 (32.33%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 115 VNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYV------------------------ 174
           +++K  R  +  SS   F+R +FI+K+A D Y  +V                        
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61

Query: 175 -----------DPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDR 213
                       P+  VV IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +R
Sbjct: 62  IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]

BLAST of Lag0028042 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-07
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 115 VNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYV------------------------ 174
           +++K  R  +  SS   F+R +FI+K+A D Y   V                        
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61

Query: 175 -----------DPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDR 213
                       P+  V+ IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]

BLAST of Lag0028042 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 2.8e-06
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 152 PQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDRDGYNDYARKSSS 211
           P+  VV IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +RD Y  YA +   
Sbjct: 12  PEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVD 71

Query: 212 V 213
           V
Sbjct: 72  V 72

[Close]

BLAST of Lag0028042 vs. NCBI nr
Match: EOY26455.1 (Uncharacterized protein TCM_028114 [Theobroma cacao])

HSP 1 Score: 57.0 bits (136), Expect = 4.5e-04
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 154 ATVVPIVREFYVNMMEGSTTSI-VRGKTIPFNSASINLFYGLPDIDRDGYNDYARK 209
           AT +P+V+EFY N +E +   + VR K +PF+S +IN FY  P+I+ DGY  Y  K
Sbjct: 70  ATKIPLVKEFYANAIEAANDFVFVRAKLVPFSSHAINEFYETPNIENDGYGQYLAK 125

[Close]

BLAST of Lag0028042 vs. NCBI nr
Match: CAN60970.1 (hypothetical protein VITISV_026408 [Vitis vinifera])

HSP 1 Score: 56.2 bits (134), Expect = 7.7e-04
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 147  NSYVDPQATVVPIVREFYVNMMEGSTTSI-VRGKTIPFNSASINLFYGLPDIDRDGYNDY 206
            N    PQ  +VP+VREFY N+ E     + VRGK + F+  +IN+F+ LPDI+ D Y  +
Sbjct: 1202 NFCAQPQVAIVPVVREFYANVPEHHHRXVFVRGKQVGFSGHAINVFFNLPDIENDDYTAF 1261

[Close]

BLAST of Lag0028042 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.5e-08
Identity = 43/133 (32.33%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 115 VNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYV------------------------ 174
           +++K  R  +  SS   F+R +FI+K+A D Y  +V                        
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61

Query: 175 -----------DPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDR 213
                       P+  VV IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +R
Sbjct: 62  IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]

BLAST of Lag0028042 vs. ExPASy TrEMBL
Match: A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-08
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 115 VNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYV------------------------ 174
           +++K  R  +  SS   F+R +FI+K+A D Y   V                        
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61

Query: 175 -----------DPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDR 213
                       P+  V+ IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]

BLAST of Lag0028042 vs. ExPASy TrEMBL
Match: A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.6e-08
Identity = 42/133 (31.58%), Postives = 63/133 (47.37%), Query Frame = 0


Query: 115 VNAKRSRRSATSSSSAPFDRRRFINKEAEDVYNSYV------------------------ 174
           +++K  R  +  SS   F+R +FI+K+A D Y   V                        
Sbjct: 2   MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSTKPERGLAPCEVHQPQLFQN 61

Query: 175 -----------DPQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDR 213
                       P+  V+ IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +R
Sbjct: 62  IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121

[Close]

BLAST of Lag0028042 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-06
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 152 PQATVVPIVREFYVNMMEGSTTSIVRGKTIPFNSASINLFYGLPDIDRDGYNDYARKSSS 211
           P+  VV IVREFY NM+EGS+ S VRG+ + F+  +IN +Y LP+ +RD Y  YA +   
Sbjct: 12  PEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVD 71

Query: 212 V 213
           V
Sbjct: 72  V 72

[Close]

BLAST of Lag0028042 vs. ExPASy TrEMBL
Match: A0A061G999 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028114 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-04
Identity = 26/56 (46.43%), Postives = 37/56 (66.07%), Query Frame = 0


Query: 154 ATVVPIVREFYVNMMEGSTTSI-VRGKTIPFNSASINLFYGLPDIDRDGYNDYARK 209
           AT +P+V+EFY N +E +   + VR K +PF+S +IN FY  P+I+ DGY  Y  K
Sbjct: 70  ATKIPLVKEFYANAIEAANDFVFVRAKLVPFSSHAINEFYETPNIENDGYGQYLAK 125

The following BLAST results are available for this feature:

BLAST of Lag0028042 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033353.1	5.2e-08	32.33	putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]...	[more]
KGN46897.1	1.1e-07	31.58	hypothetical protein Csa_020731 [Cucumis sativus]	[more]
XP_008458668.1	2.8e-06	49.18	PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo]	[more]
EOY26455.1	4.5e-04	46.43	Uncharacterized protein TCM_028114 [Theobroma cacao]	[more]
CAN60970.1	7.7e-04	43.33	hypothetical protein VITISV_026408 [Vitis vinifera]	[more]

BLAST of Lag0028042 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0028042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBY3	2.5e-08	32.33	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A0A0KER1	5.6e-08	31.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1	[more]
A0A0A0KNI1	5.6e-08	31.58	AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P...	[more]
A0A1S3C7Y0	1.4e-06	49.18	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]
A0A061G999	2.2e-04	46.43	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_028114 PE=4 SV=1	[more]

BLAST of Lag0028042 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0028042.1	Lag0028042.1	mRNA