Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTATTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGATAATCTGCCTTTTAAAAGCCCCGTGTCGTCATCCTTCTCAAGTCAAGTTCAAATCATTGCTAACGAGCTAGGGGAGCTGAAGGCCATTTGGGAAGGTTTAACGCCAGAAAGAAGATTTTTGTTCTCAAAGAGATACGGTCATATTGCAGACTTCATGTATTTTCCAGTTAATCGGTTCACCGTTCAGGTTGTGTTAGAATTCTGGGTCCCGGCCTACATGTGTTTCGTATTTCAAGATTTCGACTTAGTCCCGACCATTGAGGAGTACCACACGATGTTGAATATTGAAGAAAAATGTGGAGGGATGATTTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAAGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATATGCAGATTATCTAACAGAACTCACTCGCAAGCACATAAATGAAGAAAAAGGTCTGGTTCTGTTAGCTTTGTGCATCGACTACAACAAATTAGACTTTTGA
mRNA sequence
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTATTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGATAATCTGCCTTTTAAAAGCCCCGTGTCGTCATCCTTCTCAAGTCAAGTTCAAATCATTGCTAACGAGCTAGGGGAGCTGAAGGCCATTTGGGAAGGTTTAACGCCAGAAAGAAGATTTTTGTTCTCAAAGAGATACGGTCATATTGCAGACTTCATGTATTTTCCAGTTAATCGGTTCACCGTTCAGGTTGTGTTAGAATTCTGGGTCCCGGCCTACATGTGTTTCGTATTTCAAGATTTCGACTTAGTCCCGACCATTGAGGAGTACCACACGATGTTGAATATTGAAGAAAAATGTGGAGGGATGATTTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAAGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATATGCAGATTATCTAACAGAACTCACTCGCAAGCACATAAATGAAGAAAAAGGTCTGGTTCTGTTAGCTTTGTGCATCGACTACAACAAATTAGACTTTTGA
Coding sequence (CDS)
ATGAATGCCAACGTACCCATAGAGTCGATACGGTCATCTTCCTCTGAGTATGATGAGTTGAGTATTGTGCTACAATGGGCAGAGCAGACACAACTAAAACATGGGGATAATCTGCCTTTTAAAAGCCCCGTGTCGTCATCCTTCTCAAGTCAAGTTCAAATCATTGCTAACGAGCTAGGGGAGCTGAAGGCCATTTGGGAAGGTTTAACGCCAGAAAGAAGATTTTTGTTCTCAAAGAGATACGGTCATATTGCAGACTTCATGTATTTTCCAGTTAATCGGTTCACCGTTCAGGTTGTGTTAGAATTCTGGGTCCCGGCCTACATGTGTTTCGTATTTCAAGATTTCGACTTAGTCCCGACCATTGAGGAGTACCACACGATGTTGAATATTGAAGAAAAATGTGGAGGGATGATTTATTGTTTCAACCCACAGTTAACTGCGAAGAGAACTTTATCCAGATTTCTAGCTGTACACCTAAAAGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATATGCAGATTATCTAACAGAACTCACTCGCAAGCACATAAATGAAGAAAAAGGTCTGGTTCTGTTAGCTTTGTGCATCGACTACAACAAATTAGACTTTTGA
Protein sequence
MNANVPIESIRSSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTPERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNIEEKCGGMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESIYADYLTELTRKHINEEKGLVLLALCIDYNKLDF
Homology
BLAST of Lag0028037 vs. NCBI nr
Match:
KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa])
HSP 1 Score: 206.8 bits (525), Expect = 1.8e-49
Identity = 99/192 (51.56%), Postives = 135/192 (70.31%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD++ S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHI + MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
EK ++Y FNP+ T KRTLS+FL VH E+QK +K+KG EE++ DYL ++T+ +++
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 200
BLAST of Lag0028037 vs. NCBI nr
Match:
KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48
Identity = 99/192 (51.56%), Postives = 134/192 (69.79%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
K ++Y FNP+ T KRTLS+FL VH ++QK +KVKG EE++ DYL ++T+ +++
Sbjct: 129 PGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 200
BLAST of Lag0028037 vs. NCBI nr
Match:
TYK07552.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 187.2 bits (474), Expect = 1.4e-43
Identity = 94/191 (49.21%), Postives = 126/191 (65.97%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDESSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSSTKNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYKPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQVMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESIYADYLTELTRKHINE 191
EK ++Y FNP+ T K T E+QK +KVK EE++ DYL ++T+ +I+E
Sbjct: 129 PEKEREIVYFFNPKQTTKTT---------TEIQKYIKVKDGEENVPFDYLIKMTQTYIDE 188
Query: 192 EKGLVLLALCI 203
+KGL LLALCI
Sbjct: 189 DKGLTLLALCI 190
BLAST of Lag0028037 vs. NCBI nr
Match:
KAA0056623.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 187.2 bits (474), Expect = 1.4e-43
Identity = 96/200 (48.00%), Postives = 131/200 (65.50%), Query Frame = 0
Query: 3 ANVPIESIRSSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGEL 62
+N+ + S S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L L
Sbjct: 2 SNISMHS--SFESKFDEPSDVLKWAEEMQQKFGDGINNSSKISVLSRCQLSSTQNDLANL 61
Query: 63 KAIWEGLTPERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTI 122
K IWE LTP+RRF+FSK+YGHIA+ MY VN F ++ ++ FW PAY CF F DL+PTI
Sbjct: 62 KMIWEALTPQRRFMFSKKYGHIAELMYILVNYFALRAIINFWDPAYGCFTFGSCDLLPTI 121
Query: 123 EEYHTMLNIEEKCGGMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESIYADYLT 182
EEY ML++ EK ++Y FNP+ T K T E+QK +KVKG EE++ DYL
Sbjct: 122 EEYQAMLSMPEKEREIVYFFNPKQTTKTT---------TEIQKYIKVKGGEENVPFDYLI 181
Query: 183 ELTRKHINEEKGLVLLALCI 203
++T+ +I+E+KGL LLALCI
Sbjct: 182 KMTQTYIDEDKGLTLLALCI 190
BLAST of Lag0028037 vs. NCBI nr
Match:
KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])
HSP 1 Score: 168.7 bits (426), Expect = 5.3e-38
Identity = 90/192 (46.88%), Postives = 120/192 (62.50%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGD-------------------------------ALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ F PAY CF F +L+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCNLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
EK ++Y FNP+ T KRTLS+FL VH E+QK +KVKG EE++ DYL ++T+ +I+
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKVKGGEENVPFDYLIKMTQTYID 169
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 169
BLAST of Lag0028037 vs. ExPASy TrEMBL
Match:
A0A5A7UWQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002420 PE=4 SV=1)
HSP 1 Score: 206.8 bits (525), Expect = 8.6e-50
Identity = 99/192 (51.56%), Postives = 135/192 (70.31%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD++ S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDDINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHI + MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIVELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
EK ++Y FNP+ T KRTLS+FL VH E+QK +K+KG EE++ DYL ++T+ +++
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHAAEIQKYIKIKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 200
BLAST of Lag0028037 vs. ExPASy TrEMBL
Match:
A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49
Identity = 99/192 (51.56%), Postives = 134/192 (69.79%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSFTQNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
K ++Y FNP+ T KRTLS+FL VH ++QK +KVKG EE++ DYL ++T+ +++
Sbjct: 129 PGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEENVPFDYLIKMTQTYVD 188
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 200
BLAST of Lag0028037 vs. ExPASy TrEMBL
Match:
A0A5D3C8D9 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00220 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 7.0e-44
Identity = 94/191 (49.21%), Postives = 126/191 (65.97%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L LK IWE LTP
Sbjct: 9 SFESKFDESSDVLKWAEEMQQKFGDGINNSSQISVLSRCQLSSTKNDLANLKMIWEALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ FW PAY CF F DL+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYKPVNYFALRAIINFWDPAYGCFTFGSCDLLPTIEEYQVMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESIYADYLTELTRKHINE 191
EK ++Y FNP+ T K T E+QK +KVK EE++ DYL ++T+ +I+E
Sbjct: 129 PEKEREIVYFFNPKQTTKTT---------TEIQKYIKVKDGEENVPFDYLIKMTQTYIDE 188
Query: 192 EKGLVLLALCI 203
+KGL LLALCI
Sbjct: 189 DKGLTLLALCI 190
BLAST of Lag0028037 vs. ExPASy TrEMBL
Match:
A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 7.0e-44
Identity = 96/200 (48.00%), Postives = 131/200 (65.50%), Query Frame = 0
Query: 3 ANVPIESIRSSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGEL 62
+N+ + S S S++DE S VL+WAE+ Q K GD + S +S Q+ N+L L
Sbjct: 2 SNISMHS--SFESKFDEPSDVLKWAEEMQQKFGDGINNSSKISVLSRCQLSSTQNDLANL 61
Query: 63 KAIWEGLTPERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTI 122
K IWE LTP+RRF+FSK+YGHIA+ MY VN F ++ ++ FW PAY CF F DL+PTI
Sbjct: 62 KMIWEALTPQRRFMFSKKYGHIAELMYILVNYFALRAIINFWDPAYGCFTFGSCDLLPTI 121
Query: 123 EEYHTMLNIEEKCGGMIYCFNPQLTAKRTLSRFLAVHLKEVQKNVKVKGVEESIYADYLT 182
EEY ML++ EK ++Y FNP+ T K T E+QK +KVKG EE++ DYL
Sbjct: 122 EEYQAMLSMPEKEREIVYFFNPKQTTKTT---------TEIQKYIKVKGGEENVPFDYLI 181
Query: 183 ELTRKHINEEKGLVLLALCI 203
++T+ +I+E+KGL LLALCI
Sbjct: 182 KMTQTYIDEDKGLTLLALCI 190
BLAST of Lag0028037 vs. ExPASy TrEMBL
Match:
A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)
HSP 1 Score: 168.7 bits (426), Expect = 2.6e-38
Identity = 90/192 (46.88%), Postives = 120/192 (62.50%), Query Frame = 0
Query: 12 SSSSEYDELSIVLQWAEQTQLKHGDNLPFKSPVSSSFSSQVQIIANELGELKAIWEGLTP 71
S S++DE S VL+WAE+ Q K GD LTP
Sbjct: 9 SFESKFDEPSDVLKWAEEMQQKFGD-------------------------------ALTP 68
Query: 72 ERRFLFSKRYGHIADFMYFPVNRFTVQVVLEFWVPAYMCFVFQDFDLVPTIEEYHTMLNI 131
+RRF+FSK+YGHIA+ MY PVN F ++ ++ F PAY CF F +L+PTIEEY ML++
Sbjct: 69 QRRFMFSKKYGHIAELMYIPVNYFALRAIINFGDPAYGCFTFGSCNLLPTIEEYQAMLSM 128
Query: 132 EEKCGGMIYCFNPQLTAKRTLSRFL-AVHLKEVQKNVKVKGVEESIYADYLTELTRKHIN 191
EK ++Y FNP+ T KRTLS+FL VH E+QK +KVKG EE++ DYL ++T+ +I+
Sbjct: 129 PEKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKVKGGEENVPFDYLIKMTQTYID 169
Query: 192 EEKGLVLLALCI 203
E+KGL LLALCI
Sbjct: 189 EDKGLTLLALCI 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UWQ6 | 8.6e-50 | 51.56 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7VFL0 | 5.5e-49 | 51.56 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=... | [more] |
A0A5D3C8D9 | 7.0e-44 | 49.21 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00220 PE... | [more] |
A0A5A7UL51 | 7.0e-44 | 48.00 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 P... | [more] |
A0A5A7T5S7 | 2.6e-38 | 46.88 | Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=... | [more] |
Match Name | E-value | Identity | Description | |