Lag0027975 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGCTGTTGAGGTGCCTTCCCGCAAGAAACGCAAAATATGTGATGAGGGAGGTACATGAAGGGGTGTGTGGAAATCAGTTAGGAGCAAAATCCCTATGTCATAAGATTAGTAGACAAGGTTACTACTGGCCGACAATGTTACAGGATGCTAAAAATTTCACGAGGTCTTATGATCAATGCCAAAGGTTTGCACCGATTCCAAGGCAACCACCAGAGCCTTTAACGAGTAGTATCAGTCCTTGGCCATTCACGCAATGGGGGATATACCTGATTGGACCTTTGCTTCAAAGTAAAGAACAGACCAAGTATGCAGTGGTGGCAGTAAATTATTTCACAAAATGGGCAAAGACAGAACCGTTATCGACTATTACAGAGAAAAAGATTGCTGATTACATTTGGAAGAATATAGTGTGTTGTTTTCGGATTCCCAACACCATTATTCAGACAATGACAGACAGTTTGACAACGCAACAACATTTAGGAAGTTTTGCTCAGACTTGGGCATCACACACCGTTGTTCATCCCCGGCTCATCCTCAAGCCAATGGGCATGTAG ATGCCGCTGTTGAGGTGCCTTCCCGCAAGAAACGCAAAATATGTGATGAGGGAGGTACATGAAGGGGTGTGTGGAAATCAGTTAGGAGCAAAATCCCTATGTCATAAGATTAGTAGACAAGGTTACTACTGGCCGACAATGTTACAGGATGCTAAAAATTTCACGAGGTCTTATGATCAATGCCAAAGGTTTGCACCGATTCCAAGGCAACCACCAGAGCCTTTAACGAGTAGTATCAGTCCTTGGCCATTCACGCAATGGGGGATATACCTGATTGGACCTTTGCTTCAAAGTAAAGAACAGACCAAGTATGCAGTGGTGGCAGTAAATTATTTCACAAAATGGGCAAAGACAGAACCGTTATCGACTATTACAGAGAAAAAGATTGCTGATTACATTTGGAAGAATATAGTGTGTTGTTTTCGGATTCCCAACACCATTATTCAGACAATGACAGACAGTTTGACAACGCAACAACATTTAGGAAGTTTTGCTCAGACTTGGGCATCACACACCGTTGTTCATCCCCGGCTCATCCTCAAGCCAATGGGCATGTAG ATGCCGCTGTTGAGGTGCCTTCCCGCAAGAAACGCAAAATATGTGATGAGGGAGGTACATGAAGGGGTGTGTGGAAATCAGTTAGGAGCAAAATCCCTATGTCATAAGATTAGTAGACAAGGTTACTACTGGCCGACAATGTTACAGGATGCTAAAAATTTCACGAGGTCTTATGATCAATGCCAAAGGTTTGCACCGATTCCAAGGCAACCACCAGAGCCTTTAACGAGTAGTATCAGTCCTTGGCCATTCACGCAATGGGGGATATACCTGATTGGACCTTTGCTTCAAAGTAAAGAACAGACCAAGTATGCAGTGGTGGCAGTAAATTATTTCACAAAATGGGCAAAGACAGAACCGTTATCGACTATTACAGAGAAAAAGATTGCTGATTACATTTGGAAGAATATAGTGTGTTGTTTTCGGATTCCCAACACCATTATTCAGACAATGACAGACAGTTTGACAACGCAACAACATTTAGGAAGTTTTGCTCAGACTTGGGCATCACACACCGTTGTTCATCCCCGGCTCATCCTCAAGCCAATGGGCATGTAG MPLLRCLPARNAKYVMREVHEGVCGNQLGAKSLCHKISRQGYYWPTMLQDAKNFTRSYDQCQRFAPIPRQPPEPLTSSISPWPFTQWGIYLIGPLLQSKEQTKYAVVAVNYFTKWAKTEPLSTITEKKIADYIWKNIVCCFRIPNTIIQTMTDSLTTQQHLGSFAQTWASHTVVHPRLILKPMGM Homology
BLAST of Lag0027975 vs. NCBI nr
Match: XP_022158579.1 (uncharacterized protein LOC111025033 [Momordica charantia]) HSP 1 Score: 223.4 bits (568), Expect = 1.6e-54 Identity = 101/148 (68.24%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of Lag0027975 vs. NCBI nr
Match: XP_022154103.1 (uncharacterized protein LOC111021439 [Momordica charantia]) HSP 1 Score: 220.3 bits (560), Expect = 1.4e-53 Identity = 99/148 (66.89%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of Lag0027975 vs. NCBI nr
Match: XP_024036931.1 (uncharacterized protein LOC112096932 [Citrus clementina]) HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51 Identity = 96/174 (55.17%), Postives = 121/174 (69.54%), Query Frame = 0
BLAST of Lag0027975 vs. NCBI nr
Match: XP_020421233.1 (uncharacterized protein LOC109949580 [Prunus persica]) HSP 1 Score: 211.1 bits (536), Expect = 8.3e-51 Identity = 98/183 (53.55%), Postives = 128/183 (69.95%), Query Frame = 0
BLAST of Lag0027975 vs. NCBI nr
Match: TQE13472.1 (hypothetical protein C1H46_001039 [Malus baccata]) HSP 1 Score: 210.7 bits (535), Expect = 1.1e-50 Identity = 91/148 (61.49%), Postives = 114/148 (77.03%), Query Frame = 0
BLAST of Lag0027975 vs. ExPASy Swiss-Prot
Match: Q9P2P1 (Protein NYNRIN OS=Homo sapiens OX=9606 GN=NYNRIN PE=2 SV=3) HSP 1 Score: 48.5 bits (114), Expect = 9.3e-05 Identity = 37/153 (24.18%), Postives = 70/153 (45.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|