
Lag0027700 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGGAGCTGAGAAGGAACAGGCCAGAGGGTCGGCCAAATGCTGGAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGACCGAGGCGGCCACTCGGCCAACTTGCTTGGGCCGAGTCCCTAGGCCCCCGTTCGGTCCCTACTGCCCCGATCCGTCCCGGTTCCACACGGTTTAGCCCTAAATTGCCTCCGAACACCAAGTAGACCCTAACTGAAGACACATGTATAAATGGGGTCTCGGCCACACCCGGAAAAAGTTCGAGAAACTAACTACAGAAATACTTTTTACTGTTGATCTGACTTAGGCATCAAAGTGCAGGTGGCTTACACCACACCGGTGTGCAGCGGGTCTACTGGTTTTCAGGTCACGTCTTCCTCGTCTTCAACAAATTCACTTCTAGTGTCACGTGAAGGTCATGTGAGTAACTTGGCCAGATTTTGGCATCAACAAGAATCATTTACTCTCTTTTCTCCTTACATTTGCTCCTTCAATTCTTGTTTTATTGTTCTTCACGTTTATAACAATATTTTTAACTACCAACAATTTAAAATCCAATAAGATTACGGGTTGTTTGTAATTCTTGGGAGAAGAGTTAAAATGGTCGTAAACAAAAGATTTATTTGGAATTTAATATATATATATATTTTTGTTTATAAGAACATCAACTTTAATTCATACTCACGAAAGGCGCATGAGCAACATTACAAAGCAGATTGAAAATGGCACAAAAAAAACCCAAGAAAACACTACAAACTAAGGGATAGCCTCGCTCCCAACCAAAATTCATCATTGCCCAAAGGCAACTCACCATCTAGGAGCCCAAACACTGGATCCCCTCCCGAAACTAAATCCACGATCATCACACCACAAAGCTAGCTGCACATATGCTTCATACCCGCTCTTTCCACCTTGTCTTGCCCCTGAGCACATGGTTTAGACCTGCAAAAATTGATGTCAGAACAAAGCATTTGCATATAGAAAATAGCGCAAGTGATTTGGGAGAAGATAAGTCCAAGCTCTATCGTTCCACCCAAGATCCCACCTAAACCCTGTTAAAAGTTCAAGCCTCCTAAACTATATATAATATGATTAATAGAGATTCGAGAGTTGGCCTTTGTCATGATCAAGTCCCTGTACAAACAAATGCTCGGCCATTTGCCTAATAGAAGCTGCAATAAGTTAACAAAACATAAACCACTCAAAATTTCCCAAGCAATTCTCGTGTGTGTGTGAGTGGCCCTTCCTAGAGCAAACCCTAAAAAACCCAGAAAAACTTTATAAGCGCCTCCACCTATCTTTCCCCTACACTGGCACTAAGGCCTCGCAAAAGGCTAAAAGTCCAAAAAAGGAAGCCATACACATTGCCTAGGAGCCTGAAATAAGGAAATAATTATTTTTCTTTTCTTTTCCTTAACTTTTTCTTTTCTTTTCTCTTTTCTTTTCATTTCCTCAAAGTAGACGTATAAGACGGGGTACTAGTTTTCACACTACAGAGCAGAGATCCATAACCCGAGTTTAACCCTTGGTTGGCCTAACTGATCACCCTGCAGGCAGCTCCCTTTACCCCTAGTGCTCATTTTACTGCAAGCACAATAACCTCCTGAACAAACAAGAGAGAGCATACCTTTACTTTCCACTCTCAACACCTCTCACTCATTTTACCTCATATTTTCCAACAGACATATATTCTTTTCCCTAGGCACAGTTTGCTTGCTAATTTGCAAATTTAGACTTCCTCACTCAAACCTTACACCTATCGAGGTGATAACAGGCTTATGGGACTCACAAAACAATTCTACGCTCTCAGGACAACTATAGGGCGCAGTGGCGGATCCAACACTTCGCGCCAGGGGGGCTATATAGAAATAAGGAAAAATATCAATTTTAACCTTGAACTTGGTTCGGAGTATTAATTTTTATCCTAAGCTTTCAATTTTATTCAATTTCTCATTAAGCTTGGATATAATAAGTTTTGCAATTTGTACCTTATAGTAGGTTTTCGTAAAAAAAAAATTGTTGAAAAAATATTAACAGGTACATCCAATCAATTATGGAACATATATTAATATGACATTGATTGGATTAAGACAGAAACAACAATGGACTTTATGTATTTTGATATTAAATGGGTTAAATTATAAGTTTGATCCTTAAATTTTCAAGATTATGTCTAATAAGTCTCGAACTTTAATGATTTTTTTTTTTTTTTTAACTAATAGGTTAAGGATCTATTAGACATCAAATTGAAAAGGTTGAAATCTATTAAATACATAATTATAAGTTTCAAAACCAATTAAAAGACCTTTTAAATTTAGGAGCCCATTAGAGGCAAATTCTCAAAGTTGATTTATCAAACTTATAATTTAATTAATTAAGTTTGTTCGATAAGAATTATAAATAAAAGTTTTTTATATGAATGTAAAATAAAATTAATGAAATTAAAACATTACCGGTTAGATTTGTTTTACCTTTCACAAAAATTATACATTTGTTGTTTTTTAAAAACTAATTTACTAAATAGAAATAATTATATTCATTTTTATGTATATTTGATTCGAAAAGAAAATTTAAATTCAAATATAAAATTGAAATTGAAATTGAAATATTGATATTATATTGAAAAATTAATTTATAAACAAAGAAAAAATAGTATTGATAAAAGAAAAAGGACAAAAAAAAAACACTTAAAATTGAAACTGATAAAATAGTTTGTAAAAGAAAAGGAAAGAATAATATTGAAAAAGAAAAGGAAAAAAACGCATGCTTTAAATTAAAACAGGAAAAGTAATTTGTAAAAATAATAATACAGAAAAAAGAAAAATGAAAAAGGGATGCTTAAAATGCGTGCGGCAGGATTTGATCCAAGGTGGATAAAATTCCAACCCCTAATCTTTTCTACTAACATTCTCAAAATTCAATATTACTCAAAACAGACGTTAAAATTAATTACTAATAATATTTTTTTAAAAATTCATTACTTGTGATTAATGATTAAAAGTTACTTAAAAGTTAAAAGGATATAACAGACTAAAAATGTCTTTTTTACAAATCCTTGTTTTTTAATATAGTATAGATATAGATTTGTTTTATTTTTTAAACTAAAATAACCATGTATTTTATTTTTATTTTTATTTTGTTGTTAAATATTTAACTAATAAATAATATGATTTTGGATATATGAACTAGTATACCAATCGAAACATGTGTAGCAAAATCATATATTTGTTAAGGTAAAAAAAAACATATATATTAAATATATTAAAAAGAAAAAAAGAAAGAAAGAAAAGATATAGATGGAAAAAGAGGAGATGCCTACTTAATAGAGATGAAAAGAATTGGAAGTGTAATTTAATTGGGAAATTTATATTCAAATCCTATTTTGATTTTTGATTTTGAATCAATCATATGTTTGAATTCAATGTTTAATCAAATTAATAATTTTGATTCAAATTCATTATGGATCAAATTTGTGATCAAATATGAAATTTGATTGATGTAATATGAAATTTAATCGGTATTTTAGCTTTTTTTTTCATAAATCCTTACTTTTTAATATAGTAATATAGGTATCTTCCTAACTTTAATTTTTATATTTTATATTTACAATCATGACGTTAAAATTAATTACTAATAATATTTTATAATTATTTTTCTTATTTATTTGTTTAGATAAGATAAGTCATCTATTTTAATTTTTTTATTAATTATTTGACCTGAAAATCATATCACACATTTTTTTTTCCGGTTATAAATAGATACAAGGATGAAAAAGAAAGAAAAAGAAGATCTCTTCAGTCGACAGCCACTCTCTGTTTTCAATCCTACTTTTTATTTTCCTTCTCTTCATTCATCACTGGCGAGCAAGATGAGCAAAATTACCAACATTAATTGGGAAATTTCATCGCACATTTTTTAGATAATTTTCTCAAAACTTGCGATCGTCAATTTACCAATTGTAGACTCGTCTGTAAAGCTTGGAACGATCTGATCTTAATTTGTAAGTTTCTCCCAATTTCAAGCTTTTCCTTTGCCCATATTTATCCCTACAACAACCTCCATTGCACCGATCTCGATCCCAAACATTGGAAAGACACGAGTGTTGTCGCCTCGTTTACCTTCCATCCTCGATTCTCCAGTTTCAAAATCGTCAGTTCTTTCAATGGACTCCTTTGTCTGTCCACATCTCACACGAGACGTGTTCACATATTAAATCTCATGACAAATGAATCCATCGAACTCCCACCTCTCGCACTCTATCTTTTGAATATACGTTTCATCACTAAATACATTTACGGATTTGGTTTCAATCCCAAGTCAAAGCAGTACAAAATAGTAAGAATTTCGATGCCATTTAACAAGGTAGTAGAGGAAGTGGAGTTTTCGCATTTGGCCCAAGTTCAAACGAATGGAAGAGTGTTCCCTTCCCGCTGCGTCTCGAGATCGACGACGATGGTGTTTACTTGAATGGAGCCCTTTTTTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAATGTCCTTGTATGTTTCGACATGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAGAGATGGGAAGAGAAATTCTTTGGCCATTAGGGTTTTTGATAACCATCTCTATCTCTCTATCTTAGATGTTGATGTTTTGCCAGATATTCACAAGCTCACAGTCAGCCTTGAAGAGTCAAAGAACCTATCACCAGCATGGACTGTCATAGTCACTTTCCAGCTCAGATTAAATTCTCCTAGTCAGCAAGCCAAGCGATCCATTCGGGTTCGGGTTAGAAATTTGGGTACTGACCTGCTTTGTTAGTTACCAAATTTCAGAGAGTTTGTTAAAGGGGAATCTTGCATGTGTTTTTTGTACAGTCTCGCAAGGTTGATGATCGATTTATAAGGTCTCAATCTTCGAGTGGGAAGGAGAGTGTGTGAGAGAGAGTAATGTGTGTGTAATCACTGTGATTCTGAGTGATTGTGAGCAAGAGAGCTGAGGGATTGCTGAGGGTTATCTTTGGGTAGCAACTGGGTCTCTGTGATAGAGCGATTGCTGTAGAAGCCGTGGTGTGCTTGTTCGAGAAGATAACGAATAATCCCTGTATTGAGCTGATGATTCTAGTGGATAGCCTCAAGTGGATGTAG ATGCAAGGAGCTGAGAAGGAACAGGCCAGAGGGTCGGCCAAATGCTGGAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGACCGAGGCGGCCACTCGGCCAACTTGCTTGGGCCGAGTCCCTAGGCCCCCGTTCGGTCCCTACTGCCCCGATCCGTCCCGGTTCCACACGGTGGCTTACACCACACCGGTGTGCAGCGGGTCTACTGGTTTTCAGGTCACGTCTTCCTCGTCTTCAACAAATTCACTTCTAGTGTCACGTGAAGGTAGTAGAGGAAGTGGAGTTTTCGCATTTGGCCCAAGTTCAAACGAATGGAAGAGTGTTCCCTTCCCGCTGCGTCTCGAGATCGACGACGATGGTGTTTACTTGAATGGAGCCCTTTTTTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAATGTCCTTGTATGTTTCGACATGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAGAGATGGGAAGAGAAATTCTTTGGCCATTAGGGTTTTTGATAACCATCTCTATCTCTCTATCTTAGATGTTGATGTTTTGCCAGATATTCACAAGCTCACAGTCAGCCTTGAAGAGTCAAAGAACCTATCACCAGCATGGACTGTCATAGTCACTTTCCAGCTCAGATTAAATTCTCCTAGTCAGCAAGCCAAGCGATCCATTCGGCAACTGGGTCTCTGTGATAGAGCGATTGCTGTAGAAGCCGTGGTGTGCTTGTTCGAGAAGATAACGAATAATCCCTGTATTGAGCTGATGATTCTAGTGGATAGCCTCAAGTGGATGTAG ATGCAAGGAGCTGAGAAGGAACAGGCCAGAGGGTCGGCCAAATGCTGGAGGGATCGGGCCTTGGCCCAACCCATATGGTTGGCCTCGACCGAGGCGGCCACTCGGCCAACTTGCTTGGGCCGAGTCCCTAGGCCCCCGTTCGGTCCCTACTGCCCCGATCCGTCCCGGTTCCACACGGTGGCTTACACCACACCGGTGTGCAGCGGGTCTACTGGTTTTCAGGTCACGTCTTCCTCGTCTTCAACAAATTCACTTCTAGTGTCACGTGAAGGTAGTAGAGGAAGTGGAGTTTTCGCATTTGGCCCAAGTTCAAACGAATGGAAGAGTGTTCCCTTCCCGCTGCGTCTCGAGATCGACGACGATGGTGTTTACTTGAATGGAGCCCTTTTTTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAATGTCCTTGTATGTTTCGACATGGAAGAGGAGAGATTCAAGGAAATTTCTTTTCCCCAAGCTGGGAGAGATGGGAAGAGAAATTCTTTGGCCATTAGGGTTTTTGATAACCATCTCTATCTCTCTATCTTAGATGTTGATGTTTTGCCAGATATTCACAAGCTCACAGTCAGCCTTGAAGAGTCAAAGAACCTATCACCAGCATGGACTGTCATAGTCACTTTCCAGCTCAGATTAAATTCTCCTAGTCAGCAAGCCAAGCGATCCATTCGGCAACTGGGTCTCTGTGATAGAGCGATTGCTGTAGAAGCCGTGGTGTGCTTGTTCGAGAAGATAACGAATAATCCCTGTATTGAGCTGATGATTCTAGTGGATAGCCTCAAGTGGATGTAG MQGAEKEQARGSAKCWRDRALAQPIWLASTEAATRPTCLGRVPRPPFGPYCPDPSRFHTVAYTTPVCSGSTGFQVTSSSSSTNSLLVSREGSRGSGVFAFGPSSNEWKSVPFPLRLEIDDDGVYLNGALFWIGCYNVELESSYKNVLVCFDMEEERFKEISFPQAGRDGKRNSLAIRVFDNHLYLSILDVDVLPDIHKLTVSLEESKNLSPAWTVIVTFQLRLNSPSQQAKRSIRQLGLCDRAIAVEAVVCLFEKITNNPCIELMILVDSLKWM Homology
BLAST of Lag0027700 vs. NCBI nr
Match: KGN59660.1 (hypothetical protein Csa_001105 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 7.5e-08 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Lag0027700 vs. NCBI nr
Match: XP_011652871.1 (F-box/kelch-repeat protein At3g06240 [Cucumis sativus]) HSP 1 Score: 68.9 bits (167), Expect = 7.5e-08 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Lag0027700 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-04 Identity = 35/94 (37.23%), Postives = 57/94 (60.64%), Query Frame = 0
BLAST of Lag0027700 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-04 Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 0
BLAST of Lag0027700 vs. NCBI nr
Match: XP_026451061.1 (F-box/kelch-repeat protein At3g06240-like [Papaver somniferum]) HSP 1 Score: 57.4 bits (137), Expect = 2.3e-04 Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy Swiss-Prot
Match: Q8S8C7 (Putative F-box protein At2g16220 OS=Arabidopsis thaliana OX=3702 GN=At2g16220 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 8.1e-05 Identity = 33/135 (24.44%), Postives = 60/135 (44.44%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy Swiss-Prot
Match: Q1KS79 (F-box protein At2g23160 OS=Arabidopsis thaliana OX=3702 GN=At2g23160 PE=2 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04 Identity = 22/71 (30.99%), Postives = 38/71 (53.52%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy TrEMBL
Match: A0A0A0LCB8 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836440 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.7e-08 Identity = 42/100 (42.00%), Postives = 59/100 (59.00%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04 Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy TrEMBL
Match: A0A0A0LCZ3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G836430 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.4e-04 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy TrEMBL
Match: F6I3R8 (F-box domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_05s0124g00230 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04 Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0
BLAST of Lag0027700 vs. ExPASy TrEMBL
Match: A0A438I6S0 (F-box/kelch-repeat protein OS=Vitis vinifera OX=29760 GN=VvCHDp000423_2 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.9e-04 Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 0
BLAST of Lag0027700 vs. TAIR 10
Match: AT2G16220.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 49.3 bits (116), Expect = 5.8e-06 Identity = 33/135 (24.44%), Postives = 60/135 (44.44%), Query Frame = 0
BLAST of Lag0027700 vs. TAIR 10
Match: AT2G23160.1 (F-box family protein ) HSP 1 Score: 48.9 bits (115), Expect = 7.5e-06 Identity = 22/71 (30.99%), Postives = 38/71 (53.52%), Query Frame = 0
BLAST of Lag0027700 vs. TAIR 10
Match: AT2G16450.1 (F-box and associated interaction domains-containing protein ) HSP 1 Score: 42.4 bits (98), Expect = 7.0e-04 Identity = 47/189 (24.87%), Postives = 76/189 (40.21%), Query Frame = 0
BLAST of Lag0027700 vs. TAIR 10
Match: AT1G30920.1 (F-box family protein ) HSP 1 Score: 42.0 bits (97), Expect = 9.2e-04 Identity = 20/62 (32.26%), Postives = 33/62 (53.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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