Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCAGGCTGCAAGCAGTGGAGTGACGTCGAAGGGAAAGGCTACTGAAGACAAAATGCTGATACACTTACAAAGTGAAGAAGACACCGTTGAGAAAATTGATGATGCCATGAAGTCTAAGAAACTAGAGAGTTCGAAAAGAAGTCGAAGCCAAAAAGGACAAGAAGAGGAAAAGGGACAAGAAAAGGTCTGATAAAAGCGAAAAGAGACCAAGAAAAGAAAAGGAGTCTAGGAAAAGGGAAAAAGAGATTCGGAAGGAAGCTTCGAAAGAAAGCTCAAGCGACACTGAGATATGTTTTTATTACGTCTGTTTTTGTATGCACATATGTTTGTTAACCTTGCATACTGTGTGTTTGTGTGTCTGTTACCGTTACATACAGACTGTGTATTTTACTTACGACACAATGTTACACTTGTAGGATGAAAGTAGCGAGAACACAATCGAAAGTGAGAACACAGGCGATCAGGAAGAATTGACAAGTCATTCGGCCACTGAGTCTAGGACTAAGACCGTATCTAATATGAGACCTGACCCCGCGACACAAAGACACCTGTGGGAGAAAAAACCCCTCCAACAAGGTATGTATAGTGTTCTGTTTGTAGTATATGTAGTGTATTTGTTCATTGTATGTTATCTAACCCCAACCCTAACATATTAGGGTGGTGCTTAGAAGGATAAAGACCGCAACAAAACACCCCAAACCAAAATGACTGCATCTGGACGCCCAAGCCAAGGCCTTGCAGAACCATCAGAGGTATGTGTGCTTATTATGCGTTTAGGTCTTAAAACAGTGACTATGCTAAACGTTTAGTTGTTAAAACAATGCTTATTATAAACTAACAATGTGCAACCCCAGGATCTGTACTTGATGCCAAAAGCAAGAAGGACCCAGCCCCTTAAGATCCTATTGCATGCTAAGCCTGATATGATCGAGAAGATTAGGACAAATCTACCAGAAAGGGTTTTGGAGAGGTTCCGACAAAGTTGTTTTGGAAGCTACCTCGACTTTGCTATAACAAACCAGTCCTCCCAGCTGTTGTTGCATCTGATACATAGGCAATGTAGCCCTAAAAGCACTACGAAGATAAATTTTGTAATAGGAGGAAAAGTACTGAAGTTTGGACTTAGAGAATTTGCACTAATCACAGGGTTGAACTATGGTCCATACCCCGACATAAACAAAGCGCAAATAAAAGGAGACCACCACATCAAAACACATTACTTCGAGGGGGAGAAGACTGTCACCCGAAGGTATTTAAATATGGCGTTCAACATAAACAGAAATGCAACGAATGATGATATGTTGAAAGTGGCGCTCCTATACTTTTTGGAAAGTTTTCTTCTACCAAGACAAGATACTGTAAATGTCAACATGGAGCACATCGAGATGGTTGATGACGAGGAGCTCTTCAACAATTATCCTTGGAGAAGGTGCGCGTTTGAATTGTTGTTAGGATACATGCACAAAGCCTTGGTTAGTAAAGGCGCAACTGGTATCACAATGGGTGGGTTCAAATTCCCCTATTTGCATGGGCATACGAGGTCATCCGACCCTAAGTTCAACAGAGAGTCGTTTTGTCCGGAAGATGACTACGTGCATGCCGAGAATAACCAACTGGGTTGCAGACACGCAGCCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGGTAATATCTACATATCCATCTAATCCTTTTTACTAAACAATGTTGACTGACTATAATGTGTAAAAACTTTGAACAACACAGTTAGAGGTAAGTCTCATGCTTGCAACTGATGAAGAGCTCGCTATGGACTACTTTCAACCATTTGTTGATGGAGAAGCTGTTGGGTTTTATGTCCTAAAACTTGTAGATAGTGAATGA
mRNA sequence
ATGCGCCAGGCTGCAAGCAGTGGAGTGACGTCGAAGGGAAAGGCTACTGAAGACAAAATGCTGATACACTTACAAAGTGAAGAAGACACCGTTGAGAAAATTGATGATGCCATGAAGTCTAAGAAACTAGAGAGTTCGAAAAGAAGTCGAAGCCAAAAAGGACAAGAAGAGGAAAAGGGACAAGAAAAGGATGAAAGTAGCGAGAACACAATCGAAAGTGAGAACACAGGCGATCAGGAAGAATTGACAAGTCATTCGGCCACTGAGTCTAGGACTAAGACCAAGGATAAAGACCGCAACAAAACACCCCAAACCAAAATGACTGCATCTGGACGCCCAAGCCAAGGCCTTGCAGAACCATCAGAGGATCTGTACTTGATGCCAAAAGCAAGAAGGACCCAGCCCCTTAAGATCCTATTGCATGCTAAGCCTGATATGATCGAGAAGATTAGGACAAATCTACCAGAAAGGGTTTTGGAGAGGTTCCGACAAAGTTGTTTTGGAAGCTACCTCGACTTTGCTATAACAAACCAGTCCTCCCAGCTGTTGTTGCATCTGATACATAGGCAATGTAGCCCTAAAAGCACTACGAAGATAAATTTTGTAATAGGAGGAAAAGTACTGAAGTTTGGACTTAGAGAATTTGCACTAATCACAGGGTTGAACTATGGTCCATACCCCGACATAAACAAAGCGCAAATAAAAGGAGACCACCACATCAAAACACATTACTTCGAGGGGGAGAAGACTGTCACCCGAAGGTATTTAAATATGGCGTTCAACATAAACAGAAATGCAACGAATGATGATATGTTGAAAGTGGCGCTCCTATACTTTTTGGAAAGTTTTCTTCTACCAAGACAAGATACTGTAAATGTCAACATGGAGCACATCGAGATGGTTGATGACGAGGAGCTCTTCAACAATTATCCTTGGAGAAGGTGCGCGTTTGAATTGTTGTTAGGATACATGCACAAAGCCTTGGTTAGTAAAGGCGCAACTGGTATCACAATGGGTGGGTTCAAATTCCCCTATTTGCATGGGCATACGAGGTCATCCGACCCTAAGTTCAACAGAGAGTCGTTTTGTCCGGAAGATGACTACGTGCATGCCGAGAATAACCAACTGGGTTGCAGACACGCAGCCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGAGGTAAGTCTCATGCTTGCAACTGATGAAGAGCTCGCTATGGACTACTTTCAACCATTTGTTGATGGAGAAGCTGTTGGGTTTTATGTCCTAAAACTTGTAGATAGTGAATGA
Coding sequence (CDS)
ATGCGCCAGGCTGCAAGCAGTGGAGTGACGTCGAAGGGAAAGGCTACTGAAGACAAAATGCTGATACACTTACAAAGTGAAGAAGACACCGTTGAGAAAATTGATGATGCCATGAAGTCTAAGAAACTAGAGAGTTCGAAAAGAAGTCGAAGCCAAAAAGGACAAGAAGAGGAAAAGGGACAAGAAAAGGATGAAAGTAGCGAGAACACAATCGAAAGTGAGAACACAGGCGATCAGGAAGAATTGACAAGTCATTCGGCCACTGAGTCTAGGACTAAGACCAAGGATAAAGACCGCAACAAAACACCCCAAACCAAAATGACTGCATCTGGACGCCCAAGCCAAGGCCTTGCAGAACCATCAGAGGATCTGTACTTGATGCCAAAAGCAAGAAGGACCCAGCCCCTTAAGATCCTATTGCATGCTAAGCCTGATATGATCGAGAAGATTAGGACAAATCTACCAGAAAGGGTTTTGGAGAGGTTCCGACAAAGTTGTTTTGGAAGCTACCTCGACTTTGCTATAACAAACCAGTCCTCCCAGCTGTTGTTGCATCTGATACATAGGCAATGTAGCCCTAAAAGCACTACGAAGATAAATTTTGTAATAGGAGGAAAAGTACTGAAGTTTGGACTTAGAGAATTTGCACTAATCACAGGGTTGAACTATGGTCCATACCCCGACATAAACAAAGCGCAAATAAAAGGAGACCACCACATCAAAACACATTACTTCGAGGGGGAGAAGACTGTCACCCGAAGGTATTTAAATATGGCGTTCAACATAAACAGAAATGCAACGAATGATGATATGTTGAAAGTGGCGCTCCTATACTTTTTGGAAAGTTTTCTTCTACCAAGACAAGATACTGTAAATGTCAACATGGAGCACATCGAGATGGTTGATGACGAGGAGCTCTTCAACAATTATCCTTGGAGAAGGTGCGCGTTTGAATTGTTGTTAGGATACATGCACAAAGCCTTGGTTAGTAAAGGCGCAACTGGTATCACAATGGGTGGGTTCAAATTCCCCTATTTGCATGGGCATACGAGGTCATCCGACCCTAAGTTCAACAGAGAGTCGTTTTGTCCGGAAGATGACTACGTGCATGCCGAGAATAACCAACTGGGTTGCAGACACGCAGCCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGAGGTAAGTCTCATGCTTGCAACTGATGAAGAGCTCGCTATGGACTACTTTCAACCATTTGTTGATGGAGAAGCTGTTGGGTTTTATGTCCTAAAACTTGTAGATAGTGAATGA
Protein sequence
MRQAASSGVTSKGKATEDKMLIHLQSEEDTVEKIDDAMKSKKLESSKRSRSQKGQEEEKGQEKDESSENTIESENTGDQEELTSHSATESRTKTKDKDRNKTPQTKMTASGRPSQGLAEPSEDLYLMPKARRTQPLKILLHAKPDMIEKIRTNLPERVLERFRQSCFGSYLDFAITNQSSQLLLHLIHRQCSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKTVTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNYPWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHTRSSDPKFNRESFCPEDDYVHAENNQLGCRHAAQVEGPRPQNFLIPKEVSLMLATDEELAMDYFQPFVDGEAVGFYVLKLVDSE
Homology
BLAST of Lag0027619 vs. NCBI nr
Match:
KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 277.3 bits (708), Expect = 2.2e-70
Identity = 179/432 (41.44%), Postives = 254/432 (58.80%), Query Frame = 0
Query: 6 SSGVTSKGKATEDKMLIHLQSEEDTVEKIDDAMKSKKLESSKRSRSQKGQEEEKGQEKDE 65
S G + ++ ++ + EE TV+K + K L S KR KG+ ++K+
Sbjct: 51 SGGKRESPRTSKKRVRTETKKEEATVQK---KQRIKSLVSRKRVYRGKGK-----KQKEV 110
Query: 66 SSENTIESENTGDQEELTSHSATESRTKTKDKDRNKTPQTKMTASGRPSQGLA----EPS 125
+ + ++ E+ + S+ + K K + + R +G A E S
Sbjct: 111 EGKIAVGEDSNSSTSEILPDTRKRSKAREKGKKVKAVRKEEKAREDRRRKGKAPMNPEKS 170
Query: 126 ED-LYLMPKARRTQPLKILLHAKPDMIEKIRTNLPERVLERFRQSCFGSYLDFAITNQSS 185
ED +YLM RR +PLKI LH K +IEKI+ NL +R++ RFR+ FG +L+ +ITNQSS
Sbjct: 171 EDSVYLMCSERRNEPLKINLHIKSTVIEKIKENLGDRLINRFREGIFGHFLNLSITNQSS 230
Query: 186 QLLLHLIHRQCSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHI 245
QLLLHLI R C PKST+++ F+IGG+VL+FGLREFALITGL PDIN I G +
Sbjct: 231 QLLLHLIQRMCKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDINGGGRL 290
Query: 246 KTHYFEGEKTVTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEM 305
K YFE KTVTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ +V+ +HI M
Sbjct: 291 KGVYFENLKTVTRQYLNVMFNISTTGTDDDRIKMAKLYFLESFLIPKQECPSVDWDHIIM 350
Query: 306 VDDEELFNNYPWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHG-----HTRSSDP 365
VDD+E+F+ YPW R AFELL+ +M++ + SKG TGI+MGGF FP L T S+ P
Sbjct: 351 VDDDEVFDGYPWGRVAFELLVDFMNRVVCSKGQTGISMGGFIFPILAWAYEVIPTLSTPP 410
Query: 366 KFNRESFCPEDDYVHAENNQ----LGCRHAAQVEGP--RPQNFLIPK-EVSLMLATDEEL 421
F +V +N+ + C Q + + + F P EVS MLAT +E+
Sbjct: 411 NF----------FVTRISNEVPRIINCATDTQPKWKDLKQKVFDSPTLEVSPMLATPDEV 464
BLAST of Lag0027619 vs. NCBI nr
Match:
KAA0040869.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 200.7 bits (509), Expect = 2.6e-47
Identity = 106/230 (46.09%), Postives = 140/230 (60.87%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST+++ F+IGG+VL+FGLREFALITGL DIN IKG +K YFE KT
Sbjct: 2 CKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEISDINHEDIKGGGWLKGVYFENLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
VTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ +NV+ +HI MVDD+E+F+ Y
Sbjct: 62 VTRQYLNVMFNISTARTDDDRIKMAKLYFLESFLIPKQECLNVDWDHIIMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHTRSSDPKFNRESFCPEDDYVH 370
PW R AFELL+ +M++A+ SKG TGI+MGGF FP L
Sbjct: 122 PWGRVAFELLVDFMNRAVCSKGQTGISMGGFIFPIL------------------------ 181
Query: 371 AENNQLGCRHAAQVEGPRPQNFLIPKEVSLMLATDEELAMDYFQPFVDGE 421
+ EVS MLAT +E+ M +F PF++ E
Sbjct: 182 --------------------AWAYELEVSPMLATPDEVGMQFFAPFIETE 187
BLAST of Lag0027619 vs. NCBI nr
Match:
TYK09852.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 198.7 bits (504), Expect = 1.0e-46
Identity = 113/238 (47.48%), Postives = 151/238 (63.45%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST+++ F+IG +VL+FGLREFALITGL P+IN IKG +K YFE KT
Sbjct: 2 CKPKSTSQLQFLIGERVLRFGLREFALITGLRCHEIPNINHEDIKGGGRLKWVYFENLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
VTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ ++V+ +HI MVDD+E+F+ Y
Sbjct: 62 VTRQYLNVMFNISTAGTDDDRIKMAKLYFLESFLIPKQECLSVDWDHIIMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITM-GGFKFPYLHG-----HTRSSDPKFNRESFCP 370
PW R AFELL+ +M++A+ SKG TGI+M GGF FP L T S+ P F
Sbjct: 122 PWGRVAFELLVDFMNRAVCSKGQTGISMGGGFIFPILAWAYEVIPTLSTPPNFFATRISN 181
Query: 371 EDDYV--HAENNQLGCRHAAQVEGPRPQNFLIPKEVSLMLATDEELAMDYFQPFVDGE 421
E + A + Q + Q P EVS MLAT +E+ M +F PF + E
Sbjct: 182 EVPRIINWAADTQPKWKDLKQKVFDSP-----TLEVSPMLATPDEVGMPFFAPFNETE 234
BLAST of Lag0027619 vs. NCBI nr
Match:
KAA0035989.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 194.1 bits (492), Expect = 2.5e-45
Identity = 103/231 (44.59%), Postives = 141/231 (61.04%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST ++ F+IGG+VL+FGLREF LITGL PDIN IKG +K YF+ KT
Sbjct: 2 CKPKSTNQLQFLIGGRVLRFGLREFVLITGLKCHEIPDINHKDIKGGGRLKGVYFKNLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
+TR+YLN+ FN++ T+DD +K+A LYFLESFL+P+Q+ ++V +HI MVDD+E+F+ Y
Sbjct: 62 MTRQYLNIMFNVSTAETDDDRIKMAKLYFLESFLIPKQECLSVEWDHITMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHTRSSDPKFNRESFCPEDDYVH 370
PW R AFELL+ +M++ + SKG TGI+MGG G + PK+
Sbjct: 122 PWGRVAFELLVNFMNRVVCSKGKTGISMGGGVSHSYLGLRADTQPKW------------- 181
Query: 371 AENNQLGCRHAAQVEGPRPQNFLIPK-EVSLMLATDEELAMDYFQPFVDGE 421
+ + + F P EVS MLAT E+ M YF PF++ E
Sbjct: 182 --------------KDLKQKVFDSPTLEVSPMLATPTEVGMPYFAPFIETE 205
BLAST of Lag0027619 vs. NCBI nr
Match:
TYK22588.1 (protein Ycf2-like [Cucumis melo var. makuwa])
HSP 1 Score: 192.6 bits (488), Expect = 7.1e-45
Identity = 91/162 (56.17%), Postives = 121/162 (74.69%), Query Frame = 0
Query: 189 RQCSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGE 248
R C PKST+++ F+IGG+VL+FGLREFALITGL PDIN IKG +K YFE
Sbjct: 134 RMCKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDIKGGGRLKEVYFENL 193
Query: 249 KTVTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFN 308
+TVT +YLN+ FNI+ TNDD +K+A LYFLESFL+ +Q+ ++V+ +HI MVDD+E+F+
Sbjct: 194 ETVTMQYLNVMFNISTTGTNDDRIKMAKLYFLESFLISKQECLSVDWDHIIMVDDDEVFD 253
Query: 309 NYPWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHT 351
YPW R AFELL+ +M++A+ SKG TGI+MGG P+ G T
Sbjct: 254 GYPWGRVAFELLVEFMNRAVCSKGQTGISMGGLFSPFSLGLT 295
BLAST of Lag0027619 vs. ExPASy TrEMBL
Match:
A0A5A7U047 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00640 PE=4 SV=1)
HSP 1 Score: 277.3 bits (708), Expect = 1.1e-70
Identity = 179/432 (41.44%), Postives = 254/432 (58.80%), Query Frame = 0
Query: 6 SSGVTSKGKATEDKMLIHLQSEEDTVEKIDDAMKSKKLESSKRSRSQKGQEEEKGQEKDE 65
S G + ++ ++ + EE TV+K + K L S KR KG+ ++K+
Sbjct: 51 SGGKRESPRTSKKRVRTETKKEEATVQK---KQRIKSLVSRKRVYRGKGK-----KQKEV 110
Query: 66 SSENTIESENTGDQEELTSHSATESRTKTKDKDRNKTPQTKMTASGRPSQGLA----EPS 125
+ + ++ E+ + S+ + K K + + R +G A E S
Sbjct: 111 EGKIAVGEDSNSSTSEILPDTRKRSKAREKGKKVKAVRKEEKAREDRRRKGKAPMNPEKS 170
Query: 126 ED-LYLMPKARRTQPLKILLHAKPDMIEKIRTNLPERVLERFRQSCFGSYLDFAITNQSS 185
ED +YLM RR +PLKI LH K +IEKI+ NL +R++ RFR+ FG +L+ +ITNQSS
Sbjct: 171 EDSVYLMCSERRNEPLKINLHIKSTVIEKIKENLGDRLINRFREGIFGHFLNLSITNQSS 230
Query: 186 QLLLHLIHRQCSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHI 245
QLLLHLI R C PKST+++ F+IGG+VL+FGLREFALITGL PDIN I G +
Sbjct: 231 QLLLHLIQRMCKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDINGGGRL 290
Query: 246 KTHYFEGEKTVTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEM 305
K YFE KTVTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ +V+ +HI M
Sbjct: 291 KGVYFENLKTVTRQYLNVMFNISTTGTDDDRIKMAKLYFLESFLIPKQECPSVDWDHIIM 350
Query: 306 VDDEELFNNYPWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHG-----HTRSSDP 365
VDD+E+F+ YPW R AFELL+ +M++ + SKG TGI+MGGF FP L T S+ P
Sbjct: 351 VDDDEVFDGYPWGRVAFELLVDFMNRVVCSKGQTGISMGGFIFPILAWAYEVIPTLSTPP 410
Query: 366 KFNRESFCPEDDYVHAENNQ----LGCRHAAQVEGP--RPQNFLIPK-EVSLMLATDEEL 421
F +V +N+ + C Q + + + F P EVS MLAT +E+
Sbjct: 411 NF----------FVTRISNEVPRIINCATDTQPKWKDLKQKVFDSPTLEVSPMLATPDEV 464
BLAST of Lag0027619 vs. ExPASy TrEMBL
Match:
A0A5A7THT9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00190 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 1.3e-47
Identity = 106/230 (46.09%), Postives = 140/230 (60.87%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST+++ F+IGG+VL+FGLREFALITGL DIN IKG +K YFE KT
Sbjct: 2 CKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEISDINHEDIKGGGWLKGVYFENLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
VTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ +NV+ +HI MVDD+E+F+ Y
Sbjct: 62 VTRQYLNVMFNISTARTDDDRIKMAKLYFLESFLIPKQECLNVDWDHIIMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHTRSSDPKFNRESFCPEDDYVH 370
PW R AFELL+ +M++A+ SKG TGI+MGGF FP L
Sbjct: 122 PWGRVAFELLVDFMNRAVCSKGQTGISMGGFIFPIL------------------------ 181
Query: 371 AENNQLGCRHAAQVEGPRPQNFLIPKEVSLMLATDEELAMDYFQPFVDGE 421
+ EVS MLAT +E+ M +F PF++ E
Sbjct: 182 --------------------AWAYELEVSPMLATPDEVGMQFFAPFIETE 187
BLAST of Lag0027619 vs. ExPASy TrEMBL
Match:
A0A5D3CEX9 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00200 PE=4 SV=1)
HSP 1 Score: 198.7 bits (504), Expect = 4.8e-47
Identity = 113/238 (47.48%), Postives = 151/238 (63.45%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST+++ F+IG +VL+FGLREFALITGL P+IN IKG +K YFE KT
Sbjct: 2 CKPKSTSQLQFLIGERVLRFGLREFALITGLRCHEIPNINHEDIKGGGRLKWVYFENLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
VTR+YLN+ FNI+ T+DD +K+A LYFLESFL+P+Q+ ++V+ +HI MVDD+E+F+ Y
Sbjct: 62 VTRQYLNVMFNISTAGTDDDRIKMAKLYFLESFLIPKQECLSVDWDHIIMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITM-GGFKFPYLHG-----HTRSSDPKFNRESFCP 370
PW R AFELL+ +M++A+ SKG TGI+M GGF FP L T S+ P F
Sbjct: 122 PWGRVAFELLVDFMNRAVCSKGQTGISMGGGFIFPILAWAYEVIPTLSTPPNFFATRISN 181
Query: 371 EDDYV--HAENNQLGCRHAAQVEGPRPQNFLIPKEVSLMLATDEELAMDYFQPFVDGE 421
E + A + Q + Q P EVS MLAT +E+ M +F PF + E
Sbjct: 182 EVPRIINWAADTQPKWKDLKQKVFDSP-----TLEVSPMLATPDEVGMPFFAPFNETE 234
BLAST of Lag0027619 vs. ExPASy TrEMBL
Match:
A0A5A7T3K3 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G002030 PE=4 SV=1)
HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45
Identity = 103/231 (44.59%), Postives = 141/231 (61.04%), Query Frame = 0
Query: 191 CSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGEKT 250
C PKST ++ F+IGG+VL+FGLREF LITGL PDIN IKG +K YF+ KT
Sbjct: 2 CKPKSTNQLQFLIGGRVLRFGLREFVLITGLKCHEIPDINHKDIKGGGRLKGVYFKNLKT 61
Query: 251 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 310
+TR+YLN+ FN++ T+DD +K+A LYFLESFL+P+Q+ ++V +HI MVDD+E+F+ Y
Sbjct: 62 MTRQYLNIMFNVSTAETDDDRIKMAKLYFLESFLIPKQECLSVEWDHITMVDDDEVFDGY 121
Query: 311 PWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHTRSSDPKFNRESFCPEDDYVH 370
PW R AFELL+ +M++ + SKG TGI+MGG G + PK+
Sbjct: 122 PWGRVAFELLVNFMNRVVCSKGKTGISMGGGVSHSYLGLRADTQPKW------------- 181
Query: 371 AENNQLGCRHAAQVEGPRPQNFLIPK-EVSLMLATDEELAMDYFQPFVDGE 421
+ + + F P EVS MLAT E+ M YF PF++ E
Sbjct: 182 --------------KDLKQKVFDSPTLEVSPMLATPTEVGMPYFAPFIETE 205
BLAST of Lag0027619 vs. ExPASy TrEMBL
Match:
A0A5D3DGJ6 (Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00050 PE=4 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 3.5e-45
Identity = 91/162 (56.17%), Postives = 121/162 (74.69%), Query Frame = 0
Query: 189 RQCSPKSTTKINFVIGGKVLKFGLREFALITGLNYGPYPDINKAQIKGDHHIKTHYFEGE 248
R C PKST+++ F+IGG+VL+FGLREFALITGL PDIN IKG +K YFE
Sbjct: 134 RMCKPKSTSQLQFLIGGRVLRFGLREFALITGLRCHEIPDINHEDIKGGGRLKEVYFENL 193
Query: 249 KTVTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFN 308
+TVT +YLN+ FNI+ TNDD +K+A LYFLESFL+ +Q+ ++V+ +HI MVDD+E+F+
Sbjct: 194 ETVTMQYLNVMFNISTTGTNDDRIKMAKLYFLESFLISKQECLSVDWDHIIMVDDDEVFD 253
Query: 309 NYPWRRCAFELLLGYMHKALVSKGATGITMGGFKFPYLHGHT 351
YPW R AFELL+ +M++A+ SKG TGI+MGG P+ G T
Sbjct: 254 GYPWGRVAFELLVEFMNRAVCSKGQTGISMGGLFSPFSLGLT 295
BLAST of Lag0027619 vs. TAIR 10
Match:
AT1G31150.1 (Domain of unknown function (DUF1985) )
HSP 1 Score: 66.6 bits (161), Expect = 5.5e-11
Identity = 49/187 (26.20%), Postives = 91/187 (48.66%), Query Frame = 0
Query: 137 KILLHAKPDMIEKIRTNLP-ERVLERFRQSCFGSYLDFAIT--NQSSQLLLHLIHRQCSP 196
++ ++++P+ + I L ER + S FG +F + + S +L+ L+ RQ
Sbjct: 26 RLNIYSRPEYLGTIANLLKGSEEWERIKSSQFGKLFEFPVARCSHSGKLIHGLLSRQVVT 85
Query: 197 KSTTKINFVIGGKVLKFGLREFALITGLNYGPYP---DINKAQIKGDHHIKTHYFEGEKT 256
K ++ FV GG ++F +REF ++TGL G P ++ K Q + F GEK
Sbjct: 86 KKKHELWFVFGGHPIRFSIREFHIVTGLRCGKLPTEDEVKKHQDSKYLSVWNRLF-GEKR 145
Query: 257 VTRRYLNMAFNINRNATNDDMLKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNY 316
+ + + ++ L +AL+ ++ ++ D V ++ +EM++D + F Y
Sbjct: 146 MVTIGDVLEMLQKKKLSSWKKLCLALIVIVDGVVV-CNDQSFVTLDFVEMLNDIDFFLEY 205
Query: 317 PWRRCAF 318
PW R AF
Sbjct: 206 PWGRKAF 210
BLAST of Lag0027619 vs. TAIR 10
Match:
AT2G07240.1 (cysteine-type peptidases;cysteine-type peptidases )
HSP 1 Score: 43.9 bits (102), Expect = 3.8e-04
Identity = 21/63 (33.33%), Postives = 36/63 (57.14%), Query Frame = 0
Query: 272 LKVALLYFLESFLLPRQDTVNVNMEHIEMVDDEELFNNYPWRRCAFELLLGYMHKALVSK 331
L+ A L ++ FLLP + +H EM +D + F +YPW R +FE+++ + + V +
Sbjct: 14 LRYACLALVDGFLLPTSHYPKIIKDHAEMSEDLQGFLSYPWGRLSFEMMMTSIKEREVEQ 73
Query: 332 GAT 335
AT
Sbjct: 74 LAT 76
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7U047 | 1.1e-70 | 41.44 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00... | [more] |
A0A5A7THT9 | 1.3e-47 | 46.09 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold345G00... | [more] |
A0A5D3CEX9 | 4.8e-47 | 47.48 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G002... | [more] |
A0A5A7T3K3 | 1.2e-45 | 44.59 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G002... | [more] |
A0A5D3DGJ6 | 3.5e-45 | 56.17 | Protein Ycf2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00... | [more] |
Match Name | E-value | Identity | Description | |
AT1G31150.1 | 5.5e-11 | 26.20 | Domain of unknown function (DUF1985) | [more] |
AT2G07240.1 | 3.8e-04 | 33.33 | cysteine-type peptidases;cysteine-type peptidases | [more] |