Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCATGACGAGGTAGAAACGACGGATCATGCACTCTTTCGGTGTCCTAGAGTGCGGGAGATATGGGGGTTCCTTCAGCCATCAATCTTAATGGATCAATGGGATTGGCTAGAGATCAAAGATTGTTGGTTGAATTTTTCTGCCTATGCAGATAATATCTTATCTTGCATTTGTGTCGGTGCTTGGGCCATCTGGAACGATAGAAATGGTATGCTCCACAACCGTCCAATTCCAACGCCTCAGGATCGATGTGAGTGGATTCAGGACTATTTAACGGACTATTGGGAGGCAAATCCCACAGGCGGACCTATGGTCCAATCAGAGGATCATGTGAAACAAATTCTACTAGAAGGGGAGGAAGTCATTCTGCATACTGATGCGTCCTTTCTAGATGAAGCGACAAAATGTGGAATTGGTATTGTGATGCGTACTAAGGATGGCACATTGATGGCGGCGCAACATCATTCGATTTCTGGATGTCAATTCCCATTGGGGGCTGAATCAATAGTTGTTCTGTTAGGTCTTCAATTAGCAAGGGGTTTGAAGGTGCGGCGATTAACAGTTCTATCAGACTGTTTAGATCTGATAAAGTCTATAAACGACCAATTACAAGGGCAGTCAAGTATTGCTACGACATTATGGGATATTAGTGCGGCTCAGACGTCTTTTGAATTTGTTAATTTTAAGTTTGTTAGTTGTCATTATAATATGTTTGCTCATAATATGGCTAGAGAAGGCTATTTGTCACCTCCATGTTTATGGGTAGGTGCATTTCCTAAGTGGATGGAAATGATGTCGCTCAGGGAGAGACGTTTGTTTGTACCTGTTCGTTCTTATTTGTAA
mRNA sequence
ATGTGTCATGACGAGGTAGAAACGACGGATCATGCACTCTTTCGGTGTCCTAGAGTGCGGGAGATATGGGGGTTCCTTCAGCCATCAATCTTAATGGATCAATGGGATTGGCTAGAGATCAAAGATTGTTGGTTGAATTTTTCTGCCTATGCAGATAATATCTTATCTTGCATTTGTGTCGGTGCTTGGGCCATCTGGAACGATAGAAATGGTATGCTCCACAACCGTCCAATTCCAACGCCTCAGGATCGATGTGAGTGGATTCAGGACTATTTAACGGACTATTGGGAGGCAAATCCCACAGGCGGACCTATGGTCCAATCAGAGGATCATGTGAAACAAATTCTACTAGAAGGGGAGGAAGTCATTCTGCATACTGATGCGTCCTTTCTAGATGAAGCGACAAAATGTGGAATTGGTATTGTGATGCGTACTAAGGATGGCACATTGATGGCGGCGCAACATCATTCGATTTCTGGATGTCAATTCCCATTGGGGGCTGAATCAATAGTTGTTCTGTTAGGTCTTCAATTAGCAAGGGGTTTGAAGGTGCGGCGATTAACAGTTCTATCAGACTGTTTAGATCTGATAAAGTCTATAAACGACCAATTACAAGGGCAGTCAAGTATTGCTACGACATTATGGGATATTAGTGCGGCTCAGACGTCTTTTGAATTTGTTAATTTTAAGTTTGTTAGTTGTCATTATAATATGTTTGCTCATAATATGGCTAGAGAAGGCTATTTGTCACCTCCATGTTTATGGGTAGGTGCATTTCCTAAGTGGATGGAAATGATGTCGCTCAGGGAGAGACGTTTGTTTGTACCTGTTCGTTCTTATTTGTAA
Coding sequence (CDS)
ATGTGTCATGACGAGGTAGAAACGACGGATCATGCACTCTTTCGGTGTCCTAGAGTGCGGGAGATATGGGGGTTCCTTCAGCCATCAATCTTAATGGATCAATGGGATTGGCTAGAGATCAAAGATTGTTGGTTGAATTTTTCTGCCTATGCAGATAATATCTTATCTTGCATTTGTGTCGGTGCTTGGGCCATCTGGAACGATAGAAATGGTATGCTCCACAACCGTCCAATTCCAACGCCTCAGGATCGATGTGAGTGGATTCAGGACTATTTAACGGACTATTGGGAGGCAAATCCCACAGGCGGACCTATGGTCCAATCAGAGGATCATGTGAAACAAATTCTACTAGAAGGGGAGGAAGTCATTCTGCATACTGATGCGTCCTTTCTAGATGAAGCGACAAAATGTGGAATTGGTATTGTGATGCGTACTAAGGATGGCACATTGATGGCGGCGCAACATCATTCGATTTCTGGATGTCAATTCCCATTGGGGGCTGAATCAATAGTTGTTCTGTTAGGTCTTCAATTAGCAAGGGGTTTGAAGGTGCGGCGATTAACAGTTCTATCAGACTGTTTAGATCTGATAAAGTCTATAAACGACCAATTACAAGGGCAGTCAAGTATTGCTACGACATTATGGGATATTAGTGCGGCTCAGACGTCTTTTGAATTTGTTAATTTTAAGTTTGTTAGTTGTCATTATAATATGTTTGCTCATAATATGGCTAGAGAAGGCTATTTGTCACCTCCATGTTTATGGGTAGGTGCATTTCCTAAGTGGATGGAAATGATGTCGCTCAGGGAGAGACGTTTGTTTGTACCTGTTCGTTCTTATTTGTAA
Protein sequence
MCHDEVETTDHALFRCPRVREIWGFLQPSILMDQWDWLEIKDCWLNFSAYADNILSCICVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQILLEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGLQLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHYNMFAHNMAREGYLSPPCLWVGAFPKWMEMMSLRERRLFVPVRSYL
Homology
BLAST of Lag0027608 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 114.4 bits (285), Expect = 1.6e-21
Identity = 73/269 (27.14%), Postives = 117/269 (43.49%), Query Frame = 0
Query: 1 MCHDEVETTDHALFRCPRVREIWGFLQPSI-LMDQWDWLEIKDCWLNFSAYAD-NILSCI 60
+C D E+ HA F C R R+IW L P + + D + + W + + + L+
Sbjct: 1175 ICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLA 1234
Query: 61 CVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTG-GPMVQSEDH-VKQIL 120
+ W IWNDRN ++H + + + +CEW+ +L + +A + P QS V Q
Sbjct: 1235 AITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYW 1294
Query: 121 LEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGL 180
V L + G ++R +L+AA + PL AE +L GL
Sbjct: 1295 RPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGL 1354
Query: 181 QLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHY 240
+ A L V SD L I+ I +++ + + +I A F F++F S
Sbjct: 1355 KFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQC 1414
Query: 241 NMFAHNMAREGYLSPPC--LWVGAFPKWM 264
N AH +A+ G SP W+ FP W+
Sbjct: 1415 NRAAHGLAKWGITSPSATYAWLFNFPTWL 1443
BLAST of Lag0027608 vs. NCBI nr
Match:
XP_040953658.1 (uncharacterized protein LOC121219476 [Gossypium hirsutum])
HSP 1 Score: 104.0 bits (258), Expect = 2.2e-18
Identity = 68/260 (26.15%), Postives = 115/260 (44.23%), Query Frame = 0
Query: 2 CHDEVETTDHALFRCPRVREIWGFLQPSILMDQ-----WDWLEIKDCWLNFSAYADNILS 61
C + E + H +C E+W L S L+ Q W WL W+ F+ D L
Sbjct: 388 CGCDEENSYHIFQKCLTSIEVWNQLNLSWLLSQNNDNIWGWL----TWV-FARGTDEQLR 447
Query: 62 CICVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQIL 121
C W IW RN +++ R + + I DY+T+ G + S + +Q+
Sbjct: 448 LFCCSLWFIWFSRNQLVYERKSMSGSEIVRKISDYITEL-AVTKEGKITLLSHEFSQQVS 507
Query: 122 LEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGL 181
G I+H D +F + + G++ ++G L+A + + S P AE+ L +
Sbjct: 508 RSG-RTIIHFDVTFNSQDFRSASGLIAWNEEGVLLATEAVTHSNVANPFIAEAYAGLHAI 567
Query: 182 QLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHY 241
+L L V R+ V+ D +IK + +S I + DI SF+ + F F+
Sbjct: 568 KLGIRLGVNRIDVMGDSRTIIKKCKSKNTDKSVIGAIIRDIQTHSNSFQEIEFSFIQKAK 627
Query: 242 NMFAHNMAREGYLSPPCLWV 257
N++AH +A+E CL++
Sbjct: 628 NIYAHTLAKEALRRNECLYL 640
BLAST of Lag0027608 vs. NCBI nr
Match:
XP_040957923.1 (uncharacterized protein LOC121222088 [Gossypium hirsutum])
HSP 1 Score: 103.6 bits (257), Expect = 2.8e-18
Identity = 67/250 (26.80%), Postives = 112/250 (44.80%), Query Frame = 0
Query: 2 CHDEVETTDHALFRCPRVREIWGFLQPSILMDQ-----WDWLEIKDCWLNFSAYADNILS 61
C + E + H +CP E+W L S L+ Q W WL W+ F+ D L
Sbjct: 31 CGCDEENSYHIFQKCPTSIEVWNQLNLSWLLSQNNDNIWGWL----TWV-FARGTDEQLR 90
Query: 62 CICVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQIL 121
C W IW RN +++ R + + I DY+T+ G + S + +Q+
Sbjct: 91 LFCCNLWFIWFSRNQLVYERKNMSGSEIVRKISDYITEL-AVTKEGKITLLSHEFSQQVS 150
Query: 122 LEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGL 181
G I+H DA+F + + G++ ++G L+A Q + S P E+ L +
Sbjct: 151 RSG-RTIIHFDAAFNSQDFRSASGLIAWNEEGVLLATQAVTHSNVANPFTVEAYAGLHAI 210
Query: 182 QLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHY 241
+L L V R+ ++ D +IK + +S I + DI SF+ + F F+
Sbjct: 211 KLGIRLGVNRIDIMGDSRTIIKKCKSKNTDKSVIGAIIRDIQTHCNSFQEIEFSFIQKAK 270
Query: 242 NMFAHNMARE 247
N++AH +A+E
Sbjct: 271 NIYAHTIAKE 273
BLAST of Lag0027608 vs. NCBI nr
Match:
XP_027169594.1 (uncharacterized protein LOC113769335 [Coffea eugenioides])
HSP 1 Score: 98.2 bits (243), Expect = 1.2e-16
Identity = 72/285 (25.26%), Postives = 120/285 (42.11%), Query Frame = 0
Query: 1 MCHDEVETTDHALFRCPRVREIWGFLQ------PSILMDQWDWLEIKDCWLNFSAYADNI 60
+C DE+ET +H +F CPR + +W + + W W E+ Y
Sbjct: 176 VCGDEIETAEHMIFTCPRAQFVWKLAAVRWEGLRELKGNLWRWWEVV-AQTGSKEYGTEH 235
Query: 61 LSCICVGAWAIWNDRNGMLHNRPIPTPQD-----RCEWIQ-DYLTDYWEANPTGGPMVQS 120
+S W IW RN ++ + + + + EW + D + E N +
Sbjct: 236 ISLTTNIIWNIWKARNKVVFEQKMSDAHEIMLRAQQEWQEYDEVGQQEETNKQNARAMCQ 295
Query: 121 EDHVKQILLEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAE 180
E+ K L+EG + ++TDA+ + G GIV R G ++ A+ L E
Sbjct: 296 EEQGKVPLVEG-VIRINTDAAISASMIRTGKGIVARHWTGEIIRARGVVEQKKGEALMEE 355
Query: 181 SIVVLLGLQLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVN 240
++ + L LQ+AR R++ + SDC IN +IAT L DI+ F++
Sbjct: 356 TLTIRLALQMARDAGWRKIAIFSDCKTATDYINGNNVQDGNIATILEDIADLTQVFDYCT 415
Query: 241 FKFVSCHYNMFAHNMAR-EGYLSPPCLWVGAFPKWMEMMSLRERR 273
+V +N +H +A L WV FP W++ + + R
Sbjct: 416 ISWVPRSFNTASHRLASFASKLVNDIYWVSHFPSWLKEANRLDER 458
BLAST of Lag0027608 vs. NCBI nr
Match:
MBA0701905.1 (hypothetical protein [Gossypium aridum])
HSP 1 Score: 97.1 bits (240), Expect = 2.7e-16
Identity = 62/270 (22.96%), Postives = 125/270 (46.30%), Query Frame = 0
Query: 7 ETTDHALFRCPRVREIWGFLQPSILMDQWDWLEIKDCWLN--FSAYADNILSCICVGAWA 66
E+ +H CP + +W L ++L+ + +E + WL F +++ C WA
Sbjct: 149 ESMNHLFRECPESKSVWKELPCNVLIHE-QQMEFAE-WLTEVFVKNSESQCKMFCCSLWA 208
Query: 67 IWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQILLEGEEVI- 126
IW DRN +HN+ + ++ ++ Y+ E + G V+S + ++++
Sbjct: 209 IWGDRNNRVHNKVSKSGKEISRFVSSYIQ---ELDGIGKSKVESYKSTSKWKKPPDQIVK 268
Query: 127 LHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGLQLARGLK 186
++ DA++ +++ + GIV R + ++ + P AE++ ++ + +K
Sbjct: 269 INFDAAYDEKSKESAAGIVARNNESKVLLSCSMIYKHVASPFAAETLASRKAIKTGKEMK 328
Query: 187 VRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHYNMFAHNM 246
R++ + D L +IK + +S + T + DI Q+SF+ F+ V N AH +
Sbjct: 329 WRKIIIEGDSLSIIKKCRSNIPVKSKVCTYISDIHKLQSSFQECRFEHVPRAINSLAHMI 388
Query: 247 AREGYLSPPCLW-VGAFPKWMEMMSLRERR 273
A+ L+ V P++ E S R+RR
Sbjct: 389 AKATLRDKRILYLVEGVPEYAEDQSGRDRR 413
BLAST of Lag0027608 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 7.8e-22
Identity = 73/269 (27.14%), Postives = 117/269 (43.49%), Query Frame = 0
Query: 1 MCHDEVETTDHALFRCPRVREIWGFLQPSI-LMDQWDWLEIKDCWLNFSAYAD-NILSCI 60
+C D E+ HA F C R R+IW L P + + D + + W + + + L+
Sbjct: 1175 ICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLA 1234
Query: 61 CVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTG-GPMVQSEDH-VKQIL 120
+ W IWNDRN ++H + + + +CEW+ +L + +A + P QS V Q
Sbjct: 1235 AITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYW 1294
Query: 121 LEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGL 180
V L + G ++R +L+AA + PL AE +L GL
Sbjct: 1295 RPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGL 1354
Query: 181 QLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHY 240
+ A L V SD L I+ I +++ + + +I A F F++F S
Sbjct: 1355 KFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSSRQC 1414
Query: 241 NMFAHNMAREGYLSPPC--LWVGAFPKWM 264
N AH +A+ G SP W+ FP W+
Sbjct: 1415 NRAAHGLAKWGITSPSATYAWLFNFPTWL 1443
BLAST of Lag0027608 vs. ExPASy TrEMBL
Match:
A0A803Q8J4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 96.3 bits (238), Expect = 2.2e-16
Identity = 68/267 (25.47%), Postives = 109/267 (40.82%), Query Frame = 0
Query: 1 MCHDEVETTDHALFRCPRVREIWGFLQPSILMDQWDWLEIKDCWLNFSA-YADNILSCIC 60
+C + E+ HALF C R +W + + I+D S Y + L I
Sbjct: 1526 LCLNAWESVGHALFSCKHARHVWKVAGFTFNNKAAVSMNIEDFLFQISENYTKSELETIF 1585
Query: 61 VGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQILLEG 120
W+IW+DRN ++H + P Q++L +Y P S I
Sbjct: 1586 CTMWSIWSDRNNVIHGKSPQQPTVISAKAQNFLNNYKSTQQLSLPAGLSPPATPSISKAW 1645
Query: 121 EE-----VILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLL 180
+ L+ DA+F + K G G ++R +G + AA H I+GC P E+ +
Sbjct: 1646 SPPPPTCLKLNVDAAFDEACNKIGFGAIIRDSNGNVKAAMSHPINGCCLPQEMEAKGLFY 1705
Query: 181 GLQLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSC 240
L+ AR L + V +D L L ++ +SS ++D+ + V V
Sbjct: 1706 SLKWARQLNFKVDMVETDSLILANALRKTASNRSSFQDLIFDVQTELSYLPTVCVNHVYR 1765
Query: 241 HYNMFAHNMAREG-YLSPPCLWVGAFP 261
N AH +A++ L C W+ FP
Sbjct: 1766 DGNQAAHGLAKQALVLDNVCTWLEDFP 1792
BLAST of Lag0027608 vs. ExPASy TrEMBL
Match:
A0A7J9FKW3 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025516 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 66/249 (26.51%), Postives = 111/249 (44.58%), Query Frame = 0
Query: 7 ETTDHALFRCPRVREIWGFLQPSILMDQ-----WDWLEIKDCWLNFSAYADNILSCICVG 66
E + H CPR E+W L S +++Q W WL W+ F D L C
Sbjct: 85 ENSWHIFIECPRSMEVWDQLNLSWVLNQNIKNIWGWL----TWV-FDRGTDEQLHLFCCC 144
Query: 67 AWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQILLEGEE 126
W IW RN +++ + + + + + I Y T+ + + S +++Q+ G
Sbjct: 145 LWFIWFSRNHLIYEKRLMSGSEIAKKISAYTTEL-AISKVRTLTLHSSGNLQQLYKRGWT 204
Query: 127 VILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGLQLARG 186
I H DA++ + I+ R ++ +A+Q + S P AE+ L ++L
Sbjct: 205 YI-HFDAAYDRLGFRSASSIIARNENRETLASQAVTHSNIADPFTAEAYAGLQAIKLGIR 264
Query: 187 LKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHYNMFAH 246
L V +LTVL D +IK +S I + DI + + F+ + F FV +N +AH
Sbjct: 265 LGVNKLTVLGDSKTVIKKRQSLFTDKSVIGEIITDIQSLKKGFQEIEFIFVPKEHNFYAH 324
Query: 247 NMAREGYLS 251
+A+E S
Sbjct: 325 TIAKESLRS 326
BLAST of Lag0027608 vs. ExPASy TrEMBL
Match:
A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 0
Query: 1 MCHDEVETTDHALFRCPRVREIWGFLQPSILMDQWDW-LEIKDCWLNF-SAYADNILSCI 60
+C ++ETTDHALF+C R +E+W L P Q D+ ++D L + + +
Sbjct: 30 VCGKQIETTDHALFKCKRAKEVWNILLPQ-AFPQCDFNNSVQDGLLYLVESLSTPDFDLV 89
Query: 61 CVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYW--EANPTGGPMVQSEDHVKQIL 120
VG WAIWNDRN + R IP + R +WI Y+ D+ + G +Q +
Sbjct: 90 GVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASSNDRT 149
Query: 121 LE-------GEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAES 176
+E + ++ DA+ + GIGIV R + G ++AA H PL AES
Sbjct: 150 IENYWSPPPAGWIKINVDAACKKHQFRTGIGIVCRNEKGQILAAASHD------PLMAES 208
BLAST of Lag0027608 vs. ExPASy TrEMBL
Match:
A0A7J8TBS8 (RNase H domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_029975 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 63/250 (25.20%), Postives = 106/250 (42.40%), Query Frame = 0
Query: 2 CHDEVETTDHALFRCPRVREIWGFLQPS-----ILMDQWDWLEIKDCWLNFSAYADNILS 61
C E E ++H RCP +E+ G L S I +D W WL W+ F
Sbjct: 9 CGQETEDSNHVFQRCPIAKEVCGQLNYSWVFNNINLDLWSWL----TWV-FREGTTEQCR 68
Query: 62 CICVGAWAIWNDRNGMLHNRPIPTPQDRCEWIQDYLTDYWEANPTGGPMVQSEDHVKQIL 121
C G W +W RN L+ I T +D + I+ Y+ + +V + ++
Sbjct: 69 GFCYGLWILWTSRNKFLYEGKISTSRDISKQIKSYILEMEGIRERELTLVTNTKTNQR-- 128
Query: 122 LEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESIVVLLGL 181
L+ E + DA+F + + IG+V++ +DG ++AA+ P AE+
Sbjct: 129 LQRENTTIFFDAAFDSQHNRSAIGLVVKEQDGKIVAAKSILHENVASPFAAEAYAGYQAT 188
Query: 182 QLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFKFVSCHY 241
L L + +L D + + + +S I + DI + F+ + F F+
Sbjct: 189 MLGIQLGYLNVDILGDSKIVTSKCQSENRDRSEIGAIISDIQGLKCFFQKIRFSFIPRTR 248
Query: 242 NMFAHNMARE 247
N+ AH +ARE
Sbjct: 249 NIEAHRIARE 251
BLAST of Lag0027608 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 71.2 bits (173), Expect = 1.5e-12
Identity = 73/275 (26.55%), Postives = 112/275 (40.73%), Query Frame = 0
Query: 2 CHDEVETTDHALFRCPRVREIWGFLQPSILMDQW---DWLEIKDCWLNF---SAYADNIL 61
CH E E+ +HALF CP W S++ +Q D+ E LNF + +D
Sbjct: 203 CHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHK 262
Query: 62 SCICVGAWAIWNDRNGMLHNR----PIPTPQDRCEWIQDYLTDYWEANPTGGPMVQ-SED 121
W IW RN ++ N+ P T D+L T P Q +E+
Sbjct: 263 LLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAEN 322
Query: 122 HVKQILLEGEEVILHTDASFLDEATKCGIGIVMRTKDGTLMAAQHHSISGCQFPLGAESI 181
++ V + DA F + + G ++R GT ++ ++ PL AE+
Sbjct: 323 KIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETK 382
Query: 182 VVLLGLQLARGLKVRRLTVLSDCLDLIKSINDQLQGQSSIATTLWDISAAQTSFEFVNFK 241
+L LQ ++ + DC LI IN + SS+A L DIS F + F
Sbjct: 383 ALLAALQQTWIRGYTQVFMEGDCQTLINLING-ISFHSSLANHLEDISFWANKFASIQFG 442
Query: 242 FVSCHYNMFAHNMAREG-YLSPPCLWVGAFPKWME 265
F+ N AH +A+ G S G+ P W++
Sbjct: 443 FIRRKGNKLAHVLAKYGCTYSTFYSGSGSLPIWLD 476
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 7.8e-22 | 27.14 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803Q8J4 | 2.2e-16 | 25.47 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A7J9FKW3 | 1.1e-15 | 26.51 | Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_025516 PE=4 SV=1 | [more] |
A0A6J1CTE3 | 2.4e-15 | 31.18 | uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A7J8TBS8 | 2.4e-15 | 25.20 | RNase H domain-containing protein OS=Gossypium davidsonii OX=34287 GN=Godav_0299... | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 1.5e-12 | 26.55 | Ribonuclease H-like superfamily protein | [more] |