Lag0027578 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027578
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ras-related protein Rab-2A
Location	chr8: 2181947 .. 2185704 (+)
RNA-Seq Expression	Lag0027578
Synteny	Lag0027578

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACAGGTTTGTTCAAAATCTTTGTTTTGATTGTTCTTCTGGGTTTGCGAGGATTTGTTCTGAAATTGGGGTTTCTTGTGTGGGTTGTAGGCGTGGGGAAATCTTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATCGGCGTTGAGTTTGGTGCTCGCATGGTCACCATTGATGGCCGACCCATTAAGCTTCAGATATGGGATACTGTGAGTTTCGCTTCTTTGTATTTTAATATCTTTTATGCGTTGCTAGAGAATGATAAGAGTAAGACCAATCTTTTGGAATTGAGTTTTTTTGTGTTCTACCAAGAACTGTTGATAGGACTAGATCCTAAGAAATCACTCCAGAAACTCAATCTTTGATAATCCTTTATTGATATCAATTGATTTCGGGTCATGTTTGGATCAAGTTTTGTGGGGATGTCTGTTTGCTAAGGCAATTTAGAACGGTTTCTTGGAGGCTTTTGGAGCCGAGATGGCTCGTAATAGAGGGTTTATAGCATCCTCGTTTCGAGATAGAGAGATTGCTTTTTGGCACAGTGCTTTCTTTGCAGTCTTATGAAATATTGACTTGAGAGGAATAGGAGGGTTTTTAGAGATGTGGAGAGTTCTTGGAGGAGGTTTGGGCCTTGGCTAGGTTCGACGCCTCCCTTCGTGTCTCTCACTCTTTTGAACTGAGCCATTTTATGTAGTTTTTTAGTCGGTTAGCTTTTTGTTCTTTGTTCTTATCTTAGCTCCTTTGCCTTGGCCTTTCCCATTTTTTTTGTATTGCTATGTGTATCCCTTCATTCCTTCTCAATGGAAGTTGGTTTCTTCGTAAAACAAAAATGACTTCATGATAGACTGTGAAATCTTTTCTTATTAAGAATTATTCTTGTCATCCTGTGGTCTATGATAGGCTTTATTGGTTAAGAATTCAGGGGGACAAGTTATTTGTTGAGTCATCTGTGCTTGTTGAAAATCAAAGAATGTCCCCCACTGGTTTATGACATTACGGCAAGAAAGGAGAAAATGACCAGCAGATTGATTTGTTGTCTTGTATGTACTGTGCCCACTACTGGAGGAGTTAATTTTTGTTGGTATAAACCCACCCTATTTGTTGCATGATGTATAGGTCTATTGGCGCTAGCCACTTCCATCAATTGGCCCAGATTTTGACCGAACACGAAATGACCGGCCCATTGGTAGTGGTAGGGACCTTGGCCTTCCAAGTACTCTGCAAACAGCCAGATTTTATAAGCGTGCTTCCTAGTCACACTAACATGTTAAAGAAGATTTAACCATAAAAGAACCCAAACCCAACCCAAATGTCCAGAATCCTGAATATTACAGGGTGAAAGCACTCAATCTTCTGTTGAAGAATAGCAATAGCCCACTGTCTTCTAATTTTTACTGTTATCCAAGTTATACAACCAGGGGAGAACCTTGCAGACATGTATATTTTCAGGTCACTTTTTATTGCTTCCTAATGCGGTTGAGATTGGAAATTGAATGCGAGGGGCTCCCTAGAGCGTTACCTCTCAGTTAAGCTACTGGAATCCTTATAATGTTTGATGATTATTTTCTAGAAGTTCTGCTTTTCTTATTTAATCTGTGTGTTCTCATGGATGACATGTTTTCATTTTTAGAACAAATGAAGTTCTTTAGGAAACTATGGATTTTTTAATGGCAATTTCAATGTTCCACTAGTATTTACTTTTATAACTCATCTAATTGAAGTTCTTTAAAACAATCTTGAAAACAGAAATGGCAAGCCATTAGCAGCTGGTTGGGAGCTATTTGGAAAATAACCTTTGGCGATTGTTTTTAGAACAAATTTCAGGAATTGTGATTGCATAATTCATGGGAATTAAAGTTGTACTCTTGAAATCATTAATCATACTATGATTGATAACTCATTGGTAAATCGAACTAAAAGAAAATAATAAAAAACAATTATCCAAATATAAATTTTCATGATTTTTTGTTCTAGAAAATAAAAAGCTATTTTTCAAAACAGCTGTCAAATAGTTCCTTATGTTTGCCAAACATCAGACAATAGATTCTTTTCTGGTAATGGTCAAAACAGATGATGTTCCTCTTTCTCTTTTGGGTAGATAGTGACATTTTACTTTATTGCAGGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTATAGAGGAGCAGCCGGTGCTCTTTTAGTTTATGACATTACCAGGTGAGTTTGTGGAATTGATGAATGGATTAACTTTTCTTATCATCCTTAATTTTACCCTTCTTTCTATTTATTAAAAAGAACTTTGAGATTTTTGCATCACCACCTTCAGAGTTCAAATCATAAACGTTATTTTTGTATGATTGATTGACTGTATTTATTGTGTGGCTCCTCTTGGTATAAAATTCATATCCAATCTTTGTTGTTGTACCCTTGCATTTGCATTTGAGTTATTTCCTTTTTGAGAAATCTGAGATCAACTCATTATGTTGTCAGGAGGGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGGCAGCATGCAAATCCCAACATGTCAATTATGCTTGTAGGGAACAAGTCAGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAGCAATTTGCAAAAGAAAATGGACTCTTATTTTTAGAGGCATCTGCTAGAACAGCTCAAAATGTGGAAGAGGTCAGTTTTGTTTTATTTCACATTTGCTTCTTCTAAAAGGGCAGAATGTCTTAAATTGTCTTATGTTTGATTTTACAGGCATTTATAAAGACAGCCGCTAAAATACTTCAAAATATTCAAGACGGTGTCTTTGATGTATCAAATGAGGTAAGTTGGGGCCTATCTTTTCTTTTGTGAGAAAAAAAATGTATATTGTTGGCCGTAAATGCTACGTAACCATCCGGGTTGTGATATAGAACCTCTAATAAAGGAAAAAGAAGTTTTCAGATTCAGGGATTTCATGCCGCATTATGAGATTACTTACCTGACATTCCTGACATTCTTAGAACTGCATTAGGTTGTGGCACTGGGGCATGTGAAAAATAAGTAAAGGGCTTCCAATAGTACTCGTCCTATGTGGAATAATATTCCCTGAGTTTTCTGATAACCAATGTTGTAAGGTTAGATACTTATCTCAAGTGATTAGTTAAGTTGTAACTAAGTTCGTCCGAACACTTATGGGTATCAAAGAAGTTAGTAGCATTTGTGAGACGATATTTGTTTTCTTTGCTGTTATTTGGATGTCGTGGTTAGGTAGGAATAGAAGAGTTTTTTTTAGGAGCTTGAGAGATCTTGGAAGGATGTGTGGTCTCTTGCTAGGTTTAACACTCTGGCTAAGACTTTTTGTAATTATCTTCTAGATTTGGTCCTTTTAGATTGGACGAGAGTAGAAGAGAGAGCTTTTGTACCTCTCTCCAAGAGATACGATTCGGTATCTGTTTCATTTTGTTGGATTGTTTTTTTTAATACCCATATATATTCTTTCATTCATTTATTTTGGATGAAAGTATGTTTTCTGATATGATATAAGCTTAAACTACTGCAACCATGAAGAACATAAAAGAATTTTTACGATACTGCGGTTTGATCGAATATTGCAGTCATCTGGTATCAAGGTCGGTTACGGGCGGCCTCAAGGACCATCAGGTGCAAGAGATGGAACAGTTGCACAAAGAGGTGGATGCTGTGGCTAA

mRNA sequence

ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACAGGCGTGGGGAAATCTTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATCGGCGTTGAGTTTGGTGCTCGCATGGTCACCATTGATGGCCGACCCATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTATAGAGGAGCAGCCGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGGCAGCATGCAAATCCCAACATGTCAATTATGCTTGTAGGGAACAAGTCAGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAGCAATTTGCAAAAGAAAATGGACTCTTATTTTTAGAGGCATCTGCTAGAACAGCTCAAAATGTGGAAGAGGCATTTATAAAGACAGCCGCTAAAATACTTCAAAATATTCAAGACGGTGTCTTTGATGTATCAAATGAGTCATCTGGTATCAAGGTCGGTTACGGGCGGCCTCAAGGACCATCAGGTGCAAGAGATGGAACAGTTGCACAAAGAGGTGGATGCTGTGGCTAA

Coding sequence (CDS)

ATGTCGTACGATTACCTCTTCAAGTACATCATCATCGGCGATACAGGCGTGGGGAAATCTTGCTTGTTGTTGCAGTTCACGGACAAGAGGTTTCAGCCTGTGCACGATCTCACTATCGGCGTTGAGTTTGGTGCTCGCATGGTCACCATTGATGGCCGACCCATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCATTCAGATCAATTACAAGATCTTACTATAGAGGAGCAGCCGGTGCTCTTTTAGTTTATGACATTACCAGGAGGGAGACATTCAATCACTTGGCAAGCTGGTTGGAGGATGCTCGGCAGCATGCAAATCCCAACATGTCAATTATGCTTGTAGGGAACAAGTCAGATCTCGCTCATCGAAGAGCTGTAAGCAAGGAAGAGGGAGAGCAATTTGCAAAAGAAAATGGACTCTTATTTTTAGAGGCATCTGCTAGAACAGCTCAAAATGTGGAAGAGGCATTTATAAAGACAGCCGCTAAAATACTTCAAAATATTCAAGACGGTGTCTTTGATGTATCAAATGAGTCATCTGGTATCAAGGTCGGTTACGGGCGGCCTCAAGGACCATCAGGTGCAAGAGATGGAACAGTTGCACAAAGAGGTGGATGCTGTGGCTAA

Protein sequence

MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCCG

Homology

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BLAST of Lag0027578 vs. NCBI nr
Match: XP_038894253.1 (ras-related protein RABB1b [Benincasa hispida])

HSP 1 Score: 422.2 bits (1084), Expect = 2.7e-114
Identity = 209/211 (99.05%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 211

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BLAST of Lag0027578 vs. NCBI nr
Match: XP_008450002.1 (PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related protein RABB1b [Cucumis melo var. makuwa] >TYK27226.1 ras-related protein RABB1b [Cucumis melo var. makuwa])

HSP 1 Score: 420.2 bits (1079), Expect = 1.0e-113
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

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BLAST of Lag0027578 vs. NCBI nr
Match: XP_022989237.1 (ras-related protein RABB1b [Cucurbita maxima])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 207/210 (98.57%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGYGRPQGPSGARDGTVAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210

[Close]

BLAST of Lag0027578 vs. NCBI nr
Match: XP_004145694.1 (ras-related protein RABB1b [Cucumis sativus] >KAE8650793.1 hypothetical protein Csa_017617 [Cucumis sativus])

HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 211

[Close]

BLAST of Lag0027578 vs. NCBI nr
Match: XP_023912425.1 (ras-related protein RABB1b [Quercus suber] >KAF3954348.1 hypothetical protein CMV_020295 [Castanea mollissima])

HSP 1 Score: 418.7 bits (1075), Expect = 3.0e-113
Identity = 207/211 (98.10%), Postives = 209/211 (99.05%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Lag0027578 vs. ExPASy Swiss-Prot
Match: Q38922 (Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.2e-111
Identity = 196/211 (92.89%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIK+GYGR QG +G RDGT++Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

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BLAST of Lag0027578 vs. ExPASy Swiss-Prot
Match: P92963 (Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 1.7e-103
Identity = 185/211 (87.68%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ES GIKVGYG   GPSG RDG+ +Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Lag0027578 vs. ExPASy Swiss-Prot
Match: P49104 (Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-97
Identity = 178/210 (84.76%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 211
           ES GIKVGY  P G SG    + +Q GGCC
Sbjct: 181 ESYGIKVGYAIP-GQSGGAGSSSSQGGGCC 209

[Close]

BLAST of Lag0027578 vs. ExPASy Swiss-Prot
Match: P49103 (Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2)

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-97
Identity = 178/210 (84.76%), Postives = 190/210 (90.48%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA  I + IQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 211
           ES GIKVGY  P    GA  G+ +Q GGCC
Sbjct: 181 ESYGIKVGYVVPGQSGGA--GSSSQGGGCC 208

[Close]

BLAST of Lag0027578 vs. ExPASy Swiss-Prot
Match: P36863 (GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.4e-94
Identity = 174/213 (81.69%), Postives = 186/213 (87.32%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQ-GPSGAR--DGTVAQRGGCC 211
           ES GIKVGYG    GP  A+  +G   +   CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213

[Close]

BLAST of Lag0027578 vs. ExPASy TrEMBL
Match: A0A5A7T4U5 (Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001040 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Lag0027578 vs. ExPASy TrEMBL
Match: A0A1S3BMP4 (ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.0e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Lag0027578 vs. ExPASy TrEMBL
Match: A0A6J1JF93 (ras-related protein RABB1b OS=Cucurbita maxima OX=3661 GN=LOC111486377 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 207/210 (98.57%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP+KLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPVKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 211
           ESSGIKVGYGRPQGPSGARDGTVAQRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210

[Close]

BLAST of Lag0027578 vs. ExPASy TrEMBL
Match: A0A0A0LC04 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597310 PE=4 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 6.5e-114
Identity = 208/211 (98.58%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 53  MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 112

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK
Sbjct: 113 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 172

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           +DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ+GVFDVSN
Sbjct: 173 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 232

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG
Sbjct: 233 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 263

[Close]

BLAST of Lag0027578 vs. ExPASy TrEMBL
Match: A0A6A1VG46 (Ras-related protein RABB1b OS=Morella rubra OX=262757 GN=CJ030_MR6G022436 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 206/211 (97.63%), Postives = 210/211 (99.53%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
           SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TAAKILQNIQ+GVFDVSN
Sbjct: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAAKILQNIQEGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIKVGYGRPQGPSGARDG VAQRGGCCG
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGAVAQRGGCCG 211

[Close]

BLAST of Lag0027578 vs. TAIR 10
Match: AT4G35860.1 (GTP-binding 2 )

HSP 1 Score: 402.9 bits (1034), Expect = 1.6e-112
Identity = 196/211 (92.89%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ESSGIK+GYGR QG +G RDGT++Q GGCCG
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211

[Close]

BLAST of Lag0027578 vs. TAIR 10
Match: AT4G17170.1 (RAB GTPase homolog B1C )

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-104
Identity = 185/211 (87.68%), Postives = 196/211 (92.89%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1   MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ES GIKVGYG   GPSG RDG+ +Q GGCCG
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCCG 211

[Close]

BLAST of Lag0027578 vs. TAIR 10
Match: AT4G17160.1 (RAB GTPase homolog B1A )

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-83
Identity = 153/212 (72.17%), Postives = 175/212 (82.55%), Query Frame = 0


Query: 1   MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
           MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIW
Sbjct: 1   MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60

Query: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
           DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NM+ ML+GNK
Sbjct: 61  DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120

Query: 121 SDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
            DL  +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180

Query: 181 ESSGIKVGYGRPQGPSGARDGTVA-QRGGCCG 212
           E        G   GP G +D + + QR GCCG
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCCG 205

[Close]

BLAST of Lag0027578 vs. TAIR 10
Match: AT4G35860.2 (GTP-binding 2 )

HSP 1 Score: 306.2 bits (783), Expect = 2.0e-83
Identity = 150/165 (90.91%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 47  MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 106
           MVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ
Sbjct: 1   MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60

Query: 107 HANPNMSIMLVGNKSDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
           HANPNMSIML+GNK DLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAK
Sbjct: 61  HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120

Query: 167 ILQNIQDGVFDVSNESSGIKVGYGRPQGPSGARDGTVAQRGGCCG 212
           ILQNIQDGVFDVSNESSGIK+GYGR QG +G RDGT++Q GGCCG
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 165

[Close]

BLAST of Lag0027578 vs. TAIR 10
Match: AT5G45750.1 (RAB GTPase homolog A1C )

HSP 1 Score: 198.0 bits (502), Expect = 7.7e-51
Identity = 100/213 (46.95%), Postives = 136/213 (63.85%), Query Frame = 0


Query: 3   YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
           YDYLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D + IK QIWDT
Sbjct: 10  YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69

Query: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNKSD 122
           AGQE +R+IT +YYRGA GALLVYD+TR  TF ++ +WL++ R H +PN+ +MLVGNKSD
Sbjct: 70  AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129

Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSNES 182
           L H  AV  E+ + FA++  L F+E SA  A NVE AF +   +I   +     + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189

Query: 183 S-----GIKVGYGRPQGPSGARDGTVAQRGGCC 211
           +     G K+  G        +D +  ++GGCC
Sbjct: 190 ANVPSKGDKIDIG--------KDVSAVKKGGCC 214

The following BLAST results are available for this feature:

BLAST of Lag0027578 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894253.1	2.7e-114	99.05	ras-related protein RABB1b [Benincasa hispida]	[more]
XP_008450002.1	1.0e-113	98.58	PREDICTED: ras-related protein RABB1b [Cucumis melo] >KAA0037848.1 ras-related p...	[more]
XP_022989237.1	1.3e-113	98.57	ras-related protein RABB1b [Cucurbita maxima]	[more]
XP_004145694.1	1.3e-113	98.58	ras-related protein RABB1b [Cucumis sativus] >KAE8650793.1 hypothetical protein ...	[more]
XP_023912425.1	3.0e-113	98.10	ras-related protein RABB1b [Quercus suber] >KAF3954348.1 hypothetical protein CM...	[more]

BLAST of Lag0027578 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38922	2.2e-111	92.89	Ras-related protein RABB1b OS=Arabidopsis thaliana OX=3702 GN=RABB1B PE=2 SV=1	[more]
P92963	1.7e-103	87.68	Ras-related protein RABB1c OS=Arabidopsis thaliana OX=3702 GN=RABB1C PE=1 SV=1	[more]
P49104	1.1e-97	84.76	Ras-related protein Rab-2-B OS=Zea mays OX=4577 GN=RAB2B PE=2 SV=1	[more]
P49103	5.3e-97	84.76	Ras-related protein Rab-2-A OS=Zea mays OX=4577 GN=RAB2A PE=2 SV=2	[more]
P36863	1.4e-94	81.69	GTP-binding protein yptV4 OS=Volvox carteri OX=3067 GN=YPTV4 PE=3 SV=1	[more]

BLAST of Lag0027578 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4U5	5.0e-114	98.58	Ras-related protein RABB1b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BMP4	5.0e-114	98.58	ras-related protein RABB1b OS=Cucumis melo OX=3656 GN=LOC103491719 PE=4 SV=1	[more]
A0A6J1JF93	6.5e-114	98.57	ras-related protein RABB1b OS=Cucurbita maxima OX=3661 GN=LOC111486377 PE=4 SV=1	[more]
A0A0A0LC04	6.5e-114	98.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597310 PE=4 SV=1	[more]
A0A6A1VG46	1.4e-113	97.63	Ras-related protein RABB1b OS=Morella rubra OX=262757 GN=CJ030_MR6G022436 PE=4 S...	[more]

BLAST of Lag0027578 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35860.1	1.6e-112	92.89	GTP-binding 2	[more]
AT4G17170.1	1.2e-104	87.68	RAB GTPase homolog B1C	[more]
AT4G17160.1	1.5e-83	72.17	RAB GTPase homolog B1A	[more]
AT4G35860.2	2.0e-83	90.91	GTP-binding 2	[more]
AT5G45750.1	7.7e-51	46.95	RAB GTPase homolog A1C	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 110..123 score: 54.1 coord: 145..167 score: 41.49 coord: 48..70 score: 54.76 coord: 7..28 score: 51.86 coord: 30..46 score: 32.76
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..211 e-value: 6.0E-6 score: 35.0
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..170 e-value: 2.1E-34 score: 130.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..170 e-value: 3.1E-107 score: 372.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..211
None	No IPR available	PANTHER	PTHR47979	DRAB11-RELATED	coord: 1..211
None	No IPR available	PANTHER	PTHR47979:SF64	SUBFAMILY NOT NAMED	coord: 1..211
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..168 score: 9.781731
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..210 score: 36.475071
None	No IPR available	CDD	cd01866	Rab2	coord: 3..170 e-value: 3.04751E-128 score: 356.347
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..170 e-value: 9.9E-12 score: 30.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..168 e-value: 2.4E-61 score: 206.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..204 score: 18.666216
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..185 e-value: 4.1E-72 score: 243.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..180
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..160 e-value: 1.8E-32 score: 110.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027578.1	Lag0027578.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030100	regulation of endocytosis
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding