Lag0027535 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027535
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr8: 1801016 .. 1801623 (+)
RNA-Seq Expression	Lag0027535
Synteny	Lag0027535

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTCCAGTTCCAATAATGTTTTCTTAAGAACACAAGGCTTAAGGAGGTCGAAAACTCACCCAAACGAACCTAACGCTTGCTGTCCAGCTTCCAAGTTTCGCTCCGCCTTTGACGATTCGACCACCACCTACTACGGACACCTTAGATTAAGATCCAACGTTAATAGGTATTTCATTAAGACATAAAAGAGCAATAAGCTTTGACTTACAACTCCCTTAACCCAAATAATTCTTTAGAAGCAAAGCTGAAGCTTTAAGTGGCGGCGACGAACAGATCTGAAAAGAGCAAACGAGCAGATCTGAAAAAGAAGAACAAGCCTGAGGACGGAAGTGGCTGCTCAAATCTGAACGGAAAAAGTGCGGCCATTATTAACACAGTAGAGAGAGAATCTGAGAGAGAAAGATCTGAGGGGAGGCGTTACCAGCGGCGGCTTGCGGCGGTCTGCTACGGAGGAGGCGGCAACGGCAGCAACGTGATACAGAGGGTGATGAGAGCGAGAGAGAGAGAGAGCGGCGATGGCGTGGCGAGGGTTCGCGGCGGTGAGGGGAGGATTCGACGGCGAGCGACGGCGTCAGCGTCGATGTGGAATAGAAAGCTGAGATGA

mRNA sequence

ATGCCTTCCAGTTCCAATAATGTTTTCTTAAGAACACAAGGCTTAAGGAGGTCGAAAACTCACCCAAACGAACCTAACGCTTGCTGTCCAGCTTCCAAGTTTCGCTCCGCCTTTGACGATTCGACCACCACCTACTACGGACACCTTAGATTAAGATCCAACGTTAATAGATCTGAAAAGAGCAAACGAGCAGATCTGAAAAAGAAGAACAAGCCTGAGGACGGAAGTGGCTGCTCAAATCTGAACGGAAAAAGTGCGGCCATTATTAACACAGTAGAGAGAGAATCTGAGAGAGAAAGATCTGAGGGGAGGCGTTACCAGCGGCGGCTTGCGGCGGTCTGCTACGGAGGAGGCGGCAACGGCAGCAACGTGATACAGAGGGTGATGAGAGCGAGAGAGAGAGAGAGCGGCGATGGCGTGGCGAGGGTTCGCGGCGGTGAGGGGAGGATTCGACGGCGAGCGACGGCGTCAGCGTCGATGTGGAATAGAAAGCTGAGATGA

Coding sequence (CDS)

ATGCCTTCCAGTTCCAATAATGTTTTCTTAAGAACACAAGGCTTAAGGAGGTCGAAAACTCACCCAAACGAACCTAACGCTTGCTGTCCAGCTTCCAAGTTTCGCTCCGCCTTTGACGATTCGACCACCACCTACTACGGACACCTTAGATTAAGATCCAACGTTAATAGATCTGAAAAGAGCAAACGAGCAGATCTGAAAAAGAAGAACAAGCCTGAGGACGGAAGTGGCTGCTCAAATCTGAACGGAAAAAGTGCGGCCATTATTAACACAGTAGAGAGAGAATCTGAGAGAGAAAGATCTGAGGGGAGGCGTTACCAGCGGCGGCTTGCGGCGGTCTGCTACGGAGGAGGCGGCAACGGCAGCAACGTGATACAGAGGGTGATGAGAGCGAGAGAGAGAGAGAGCGGCGATGGCGTGGCGAGGGTTCGCGGCGGTGAGGGGAGGATTCGACGGCGAGCGACGGCGTCAGCGTCGATGTGGAATAGAAAGCTGAGATGA

Protein sequence

MPSSSNNVFLRTQGLRRSKTHPNEPNACCPASKFRSAFDDSTTTYYGHLRLRSNVNRSEKSKRADLKKKNKPEDGSGCSNLNGKSAAIINTVERESERERSEGRRYQRRLAAVCYGGGGNGSNVIQRVMRARERESGDGVARVRGGEGRIRRRATASASMWNRKLR

Homology

The following BLAST results are available for this feature:

BLAST of Lag0027535 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0027535 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027535.1	Lag0027535.1	mRNA