Lag0027399 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027399
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	PMD domain-containing protein
Location	chr8: 180626 .. 183949 (-)
RNA-Seq Expression	Lag0027399
Synteny	Lag0027399

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCGATCCACCGCCCACCGGATGGAGGTTATATCGCTGTCGTCGTCGAGCACGACAGATCCGTCTTCCCCAAGTTTGCTGGCTGCAGTGTATTTGGTCGCACCACCGGCGGGCCTCGCCAAGAGAAACCCAGCAAGCGTCGATCGGAGTAATTTCGTTAATTTTCTTTGAGAATTCTTCTTTCTTTTTTCTCCTGCGATTTATGGGATGTTCATGTTTGTTGGAAAAGAGAGAAATTACCTAAAGAACAGAAAGTAATTGATCTGAAAATGAAAAAAGAAAATCTTGGTATATGCAAACATAGGTATATACAATTTTTTTTACTCTAGTCATAACCTAATATATATAATTCATATACTCCGGGATATAATATGCATGCATAACACTAAGACATATATTCATGGAAACAATTATATATATATATATATATATATATATATATATTTATCAACATACAATATATAATTAGTATAATAAAACTATACATCCGTATTTATCCGATATCAAATGTTTGCAAATTTTTTTACTCTAGCCATAACCTAATATATATAATTCATATACACCGGGATATAATATGCCTACAGAACACTAATGCATATATTCATGGAAACAATCTCAGCAATCACATATATATATATCAACATACAATATATAATCAGTATAATAAAACTATACATCTGTATTTATCAGATATCAAATATTTGCAATTTTTTTTACTCTAGCCATAACCTAATATATATGATTCATATACATCAGGATATAATATGCATACAAAACACTAAGACATATATTTATGGAAACAATCTCAGCAATCATATATATATATATATATATATATATATATATCATCATACAATATATAATCAGTATAATAAAACTATACATCCGTATTTATCCGATATCAAATGTTTGCAATTTTTTTTACTCTAGCCATAACCTAATATATATAATTCATATACACCGGGATATAATATGCATACAGAACACTAAGGCATATATTCATGGAAACAATCTCAGCAATCATATATATATATAACACCATACAATATATAATCAGTATAATAAAACTATACATACGTATTTATCAGATATCAAATGTTTGCAATTTTTTTACTCTAGCCATAACCTAATATATATAATTCATATACACTGGAATATAATATGCATACAGAACATTAAGACATATATTCATGGGAACAATAGATAATAGGAGGTAATGCAAAATGGCAAAAAAGGAAGAAAAAAAAACCCAATTTCCCAAAAACGAAAAAAAAAAGAAAATATTGATGGGAGAGAGAGAAAATATTCAGTCATTATTGATTGGAGAGAGATGTTTGACCATTATTGATGGGAGAGATAGAAAATGATCATTATTGATGGAAGGGAGAGAAAATGACCATTATTGATGGGAGAGAGAGAAAATGATCATTATTGAGGGGAGAGAGAGAAAATAATCAATCATTATTGAAGAGAGATGGAACAAAGGACTCTTTGGTAAAATGACCATGACTTTTATGTAAAAAATGGTGGCTCAATGTCTATTCTTGAGAAAAATAGTGTAGTTGGACAAATCTGAAAATAGGGGGCCCAATTTGGGCTATATGTGTACTTATCTCTTGATTTTAAATGGATTATAACTCAAATTTGGCCTCCAATTGACTTAAATCCAATATCACAATTATCCAAAATCTAATTGAGGAGTAACTTAATCCTAAATTCAAATCACGACTTTTATCCTTGGATAATATTTGATTCAAATGAAATTTAGTTTCTAATTCCATTTAGATCAAAATATCACAAAAGATTGCAATCGAAGATAGAATTTGAAATCAAGCTAAGTAAAGATCCTCCAAATTGACCTTCTATAAATAGGGTGCACTTCCAATCCTTTTGTTTACTTCCAATAGCCGACCACTTGGTTTCAACTTTTTTTTAAGTTCTTTTGCCATCAACAACAGGTTCCATACTTGGCCAATATTCCTTTAAAATTTTTTCTCTAATTACCCTTCTTTCTTCATAGATCTTGGAATTAACAAACTTATTTGAGGGTGTCCTTGGACACAACATCAATCTTTATCCACCACCTGAAAGGTATATACATATTCAAATTCTTTTCCTTTTTTTTTCCCTTATTTTTTTTGTAGTGTTGTTTTTTAATTTGCAGGTACAACGTCTTTCAACACGAGTACAAGGACATGCTCCTAACTTTGGGACATGTTCCTTGGACTTGTGTCGCCACCACGCCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACACCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATGTTCCTTGGACTTGTGTCGCTGCCACGCCTTTCAGCATGAGTACAGAGACATGTTCCTCACTTTGGGACATGTTCCTTGGACTTGTGTCGCCGCCACGTCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATGTTCCTTGGACTTTTGCTGCCGCCACGTCTTTCGACATGAGTTCAAGGACATGACGTGCTCCTTTAACTCTTGTTGTTATGACGTTGCGCAACATTAGTCATAGGAAATTTTCCTCGATGCATTTATTATCATTTTAACTTATCTTCGTACACATATTATTCTTTTACTTGTGTTAACCTTCATTTCTTTAAATTTTGCAGAATCATGGTGTGCTTTGCAGAACATATTGTCTTCGAAAAGACATACCTTGTTCTTCTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAAAGCCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTAACTGGTCCGTAGAAAAGCCTCTAGACCAAGATTCTAAGGCTTGATTTCTAGAATCTTCAATCCATACACGAAATCCTAACCGACATCCAGAGGTGACGTTAGGGCGCCGAATAATTGATGGATCAGTTTGTTGGGAATACGCCTTGAAAATTTCAAGTGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGCTTCATAATGCACGTTTATTGGATGCAGTGGTGGCTTCCCTTTACATTTACAATCGAAACAATGACATAGTTCGAGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACGCTTCACACTCGTGCGGGAGAACTTTTATTTCCTTATGGGACCTTTGGACCTTTGGGGGTTTGCCCATTAGAGGTAGATTTTATGAGGAAGTTATCCCTAGTTTTAAAGAGTTAA

mRNA sequence

ATGAAGTCGATCCACCGCCCACCGGATGGAGGTTATATCGCTGTCGTCGTCGAGCACGACAGATCCGTCTTCCCCAAGTTTGCTGGCTGCAGTGTATTTGGTCGCACCACCGGCGGGCCTCGCCAAGAGAAACCCAGCAAGCGTCGATCGGAGTACAACGTCTTTCAACACGAGTACAAGGACATGCTCCTAACTTTGGGACATGTTCCTTGGACTTGTGTCGCCACCACGCCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATAATCATGGTGTGCTTTGCAGAACATATTGTCTTCGAAAAGACATACCTTGTTCTTCTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAAAGCCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTAACTGTGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGCTTCATAATGCACGTTTATTGGATGCAGTGGTGGCTTCCCTTTACATTTACAATCGAAACAATGACATAGTTCGAGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACGCTTCACACTCGTGCGGGAGAACTTTTATTTCCTTATGGGACCTTTGGACCTTTGGGGGTTTGCCCATTAGAGGTAGATTTTATGAGGAAGTTATCCCTAGTTTTAAAGAGTTAA

Coding sequence (CDS)

ATGAAGTCGATCCACCGCCCACCGGATGGAGGTTATATCGCTGTCGTCGTCGAGCACGACAGATCCGTCTTCCCCAAGTTTGCTGGCTGCAGTGTATTTGGTCGCACCACCGGCGGGCCTCGCCAAGAGAAACCCAGCAAGCGTCGATCGGAGTACAACGTCTTTCAACACGAGTACAAGGACATGCTCCTAACTTTGGGACATGTTCCTTGGACTTGTGTCGCCACCACGCCTTTCAGCATGAGTACAGGGACATGTTCCTCACTTTGGGACATAATCATGGTGTGCTTTGCAGAACATATTGTCTTCGAAAAGACATACCTTGTTCTTCTGAAAGACAACAATCAACCCATAAGAAGCGGACTCAGCTTCTTAGTAGAAAAGCCTATGACTGGACGTCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTAACTGTGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAATCTGTCGTTGGTCGGAGTGAAGAGGTGCTTCATAATGCACGTTTATTGGATGCAGTGGTGGCTTCCCTTTACATTTACAATCGAAACAATGACATAGTTCGAGCTTTTTGTGAAGCCTGGTGTCCTGCAACCAATACGCTTCACACTCGTGCGGGAGAACTTTTATTTCCTTATGGGACCTTTGGACCTTTGGGGGTTTGCCCATTAGAGGTAGATTTTATGAGGAAGTTATCCCTAGTTTTAAAGAGTTAA

Protein sequence

MKSIHRPPDGGYIAVVVEHDRSVFPKFAGCSVFGRTTGGPRQEKPSKRRSEYNVFQHEYKDMLLTLGHVPWTCVATTPFSMSTGTCSSLWDIIMVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNCEFLFIPRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYGTFGPLGVCPLEVDFMRKLSLVLKS

Homology

[Close]

BLAST of Lag0027399 vs. NCBI nr
Match: KAA0065375.1 (hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 130.6 bits (327), Expect = 1.9e-26
Identity = 76/194 (39.18%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL- 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------HTISNC-------------------------EFLFIPRYWEWL 213
                            H   N                          EF F   YWEWL
Sbjct: 61  IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG 237
           E VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL     
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 129.8 bits (325), Expect = 3.2e-26
Identity = 75/194 (38.66%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF F   YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG 237
           E VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL     
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. NCBI nr
Match: TYK20969.1 (hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 8.0e-25
Identity = 75/190 (39.47%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF FI  YWEWL
Sbjct: 61  VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 230
           E VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. NCBI nr
Match: KAA0052363.1 (hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 8.0e-25
Identity = 75/190 (39.47%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF FI  YWEWL
Sbjct: 61  VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 230
           E VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. NCBI nr
Match: KAA0061098.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 122.9 bits (307), Expect = 4.0e-24
Identity = 73/188 (38.83%), Postives = 87/188 (46.28%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC--- 153
           MV F E  +    +LV+L D NQ    GLS +VEKP  G  A  WP   N   +S     
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGTFADHWPRLDNNSVLSRLSVE 60

Query: 154 ------------------------------------------------EFLFIPRYWEWL 213
                                                           EF F   YWEWL
Sbjct: 61  IPLSEGKSAWVLQSFIHDEAPNSGRALTFGQRLIEGQTHWGTVTKVPGEFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 228
           E VVGR+  +L++  L  AV ASLY Y+RNND+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTHLYGAVTASLYTYDRNNDVVRAFCEAWCPSTNTLHTMAGELSIYLW 180

[Close]

BLAST of Lag0027399 vs. ExPASy TrEMBL
Match: A0A5A7VHW8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00370 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 9.2e-27
Identity = 76/194 (39.18%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNL- 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------HTISNC-------------------------EFLFIPRYWEWL 213
                            H   N                          EF F   YWEWL
Sbjct: 61  IPLSEGKSAWILQSSIHHEAPNSGRALTLGQRLIEGQTRWGTVTKVPREFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG 237
           E VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL     
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-26
Identity = 75/194 (38.66%), Postives = 93/194 (47.94%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF F   YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGELLFPYG 237
           E VVGR+  +L++ RL  AV ASLY Y+RN+D+VRAFCEAWCP+TNTLHT AGEL     
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. ExPASy TrEMBL
Match: A0A5A7U8X8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002060 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-25
Identity = 75/190 (39.47%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF FI  YWEWL
Sbjct: 61  VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 230
           E VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. ExPASy TrEMBL
Match: A0A5D3DCE5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18270G00010 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 3.9e-25
Identity = 75/190 (39.47%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWP--------PPLNLH 153
           MV F E  +    +LV+L D NQP   GLS +VEKP  G  A  WP        P L++ 
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60

Query: 154 -----------------------------------------TISNC--EFLFIPRYWEWL 213
                                                    T++    EF FI  YWEWL
Sbjct: 61  VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 230
           E VVGR+  +L++ RL  AV ASLY Y+ N+D+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180

[Close]

BLAST of Lag0027399 vs. ExPASy TrEMBL
Match: A0A5D3BXQ4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001510 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-24
Identity = 73/188 (38.83%), Postives = 87/188 (46.28%), Query Frame = 0


Query: 94  MVCFAEHIVFEKTYLVLLKDNNQPIRSGLSFLVEKPMTGRLAAPWPPPLNLHTISNC--- 153
           MV F E  +    +LV+L D NQ    GLS +VEKP  G  A  WP   N   +S     
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGTFADHWPRLDNNSVLSRLSVE 60

Query: 154 ------------------------------------------------EFLFIPRYWEWL 213
                                                           EF F   YWEWL
Sbjct: 61  IPLSEGKSAWVLQSFIHDEAPNSGRALTFGQRLIEGQTHWGTVTKVPGEFCFTDCYWEWL 120

Query: 214 ESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGEL---LF 228
           E VVGR+  +L++  L  AV ASLY Y+RNND+VRAFCEAWCP+TNTLHT AGEL   L+
Sbjct: 121 ELVVGRNTRLLYSTHLYGAVTASLYTYDRNNDVVRAFCEAWCPSTNTLHTMAGELSIYLW 180

[Close]

BLAST of Lag0027399 vs. TAIR 10
Match: AT1G50790.1 (Plant mobile domain protein family )

HSP 1 Score: 45.1 bits (105), Expect = 9.8e-05
Identity = 19/60 (31.67%), Postives = 29/60 (48.33%), Query Frame = 0


Query: 157 RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGE 216
           ++  W   +    E +   A + +A++AS Y   +N D+V    E WCP TNT     GE
Sbjct: 63  KFNSWARKMSALHEPIWRKAGIFEAILASTYKIFKNTDLVMGIAEKWCPDTNTFVFSWGE 122

[Close]

BLAST of Lag0027399 vs. TAIR 10
Match: AT1G51538.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.2e-04
Identity = 19/67 (28.36%), Postives = 32/67 (47.76%), Query Frame = 0


Query: 156 PRYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAG 215
           P +  W + +    E +   A + +A+ AS+Y   +N  ++ A  E WCP T +      
Sbjct: 59  PNFKSWAKKMEALHEPIWRKAGIFEAIKASMYKIRKNQSLLLALVEKWCPETKS------ 118

Query: 216 ELLFPYG 223
             LFP+G
Sbjct: 119 -FLFPWG 118

[Close]

BLAST of Lag0027399 vs. TAIR 10
Match: AT1G50820.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.8e-04
Identity = 19/66 (28.79%), Postives = 31/66 (46.97%), Query Frame = 0


Query: 157 RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGE 216
           ++  W   +    E +   A + +AV+AS Y   ++ D+V    E WCP T T       
Sbjct: 59  KFKSWARKMASLHEPIWRKAGIFEAVIASTYKIPKDTDLVLGLAEKWCPDTKT------- 117

Query: 217 LLFPYG 223
            +FP+G
Sbjct: 119 FIFPWG 117

[Close]

BLAST of Lag0027399 vs. TAIR 10
Match: AT1G50750.1 (Plant mobile domain protein family )

HSP 1 Score: 42.0 bits (97), Expect = 8.3e-04
Identity = 19/66 (28.79%), Postives = 31/66 (46.97%), Query Frame = 0


Query: 157 RYWEWLESVVGRSEEVLHNARLLDAVVASLYIYNRNNDIVRAFCEAWCPATNTLHTRAGE 216
           ++  W   +    E     A + +AV+AS+Y   +N D++    E WCP T T       
Sbjct: 38  KFESWAIEMAALHEPTWREAGIFEAVMASIYRIPKNPDLILGIAEKWCPYTKT------- 96

Query: 217 LLFPYG 223
            +FP+G
Sbjct: 98  FVFPWG 96

The following BLAST results are available for this feature:

BLAST of Lag0027399 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065375.1	1.9e-26	39.18	hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]	[more]
KAA0047478.1	3.2e-26	38.66	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
TYK20969.1	8.0e-25	39.47	hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]	[more]
KAA0052363.1	8.0e-25	39.47	hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]	[more]
KAA0061098.1	4.0e-24	38.83	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative m...	[more]

BLAST of Lag0027399 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0027399 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VHW8	9.2e-27	39.18	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5A7TX42	1.6e-26	38.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7U8X8	3.9e-25	39.47	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3DCE5	3.9e-25	39.47	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5D3BXQ4	1.9e-24	38.83	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]

BLAST of Lag0027399 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50790.1	9.8e-05	31.67	Plant mobile domain protein family	[more]
AT1G51538.1	2.2e-04	28.36	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G50820.1	2.8e-04	28.79	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G50750.1	8.3e-04	28.79	Plant mobile domain protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36607:SF20	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 112..217
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 112..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027399.1	Lag0027399.1	mRNA