Lag0027351 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027351
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr10: 46882073 .. 46884271 (+)
RNA-Seq Expression	Lag0027351
Synteny	Lag0027351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCACAGGTATGTTTCGTTAACATTTGTAATTCCATTCTGGAAATGTCCCAGGATTCAGGAATTCTATATTATGTTAATCATGCTTCATGTTTGAATTTTTAGCCTCTGCACTTTCTAAATAACCGAATTATTTGGTCCATCGGAATTAAAGTTTAATTATAATTTAAAAACCTGACTGCGCCCATTGTCCTGTTCAAATATTTACTGTGTAGTTCTCTAGCCCAAACTCAATATTTGACTTAAATTTTACATGGAACGAAGAGGAAAGGGAAGTAAATACTTGCAATTGTGTAGAGTTTTATAGAAAAGAAGAAATGTACTTCACATGTTTTTTTTTTTTGTTAATCATCAAATGGTAACATAGATAAAAGAGACAAAATTGGTCACTTAAGAACGTAAAGAAATTTTTTGCTACTTTTTTTTTTGGTGTGTGGCCCTGTAATTCAGTCAGTTCACTCTCTTTTTTCATCAACATCTAAGAAAAATTTTGTCAGTCCCCCAGCAGTCCCTTTTTGGACAACATCAGTGGAAAATTGCAGTTAGTTCACTCTCTTATGTGATTAGTAAGTGACTGAAGCAGAAGAATCCTTTCAGGTGCTAGTATCCCTTTGTTTTGGTTTATGAATTTTGTTCTTACATGATTCTATCGAAGGAAATGCTATTTCTGCATACAAATCCTGTGCTCTAAATTATTGCTAATTTCTGTATGAAACCAGGGACTGTCTCGTTAACCTGAGGTTTTGATTGAGTGATTGACTATTGTTACCTCACGTATATGTTATGAGGGTTTCTTTAATGCATGTTCACTTGGTAGAACCCAATGACTTTTACCGCCGTGTAACTTTTGGGGTTCAGTCGATGAGTTTCTTAAACTGATATACATTGCTTAATTTCTGAAATATTTAATATTAATACGTGATGAGAATAACTTTATATTTACATCTTTTTCCTTGTTGAAGAGTCCAGAGGTTTGGCTGTTCTAGTCCTGAACAAAGGAGAAGATGCATTAGAAGTGAATGTTACGGGAGGAAACTTTTTCAAGGGGCTTAAGATTTTAAAACATCGTGCAGAAAGGGTAAGGGCTATGATTTCAACCTACTTTTTCCCAAATGGAAGCCATGTGTATTTTTGGTTCGTATGTCATACTACCATTGTTTCTTTATGCGAAATAAGTTTCTCTTCATTTTAGGGAATGCTGTAACTTCTTAAAAATTTCTTTACCACAGTTAATGTAATCAATTAGACTTTCAGCCATCAGCTGCAGTTTTAAGAATTTTTGTTTTTCCACTTCTCAAGTGAATGTTTACACCTCTTACCGTTCAAAGCAAAATCTCTACATTCTAATGGTTTAGTTTATATATCAAATTGTGGTAGTTCTTTTTTGTGGCCGGGTTGAATTCGTTGATATTATTGTGCATATGTCCGGTGAAAATATTAGGACAAGTTCCATTATATTTTAGTTCCAGTTATTTTTCCATTCATTGCAGTCGGTCCTTTAAAGATCTTACTCTTGTTTGTTTGACCAGCTTGAATCTGCCAGGATCTTTTTCCCTTTTTCATAAAAAATTCAAAGACCTTATTCTTGTTTGTCTGTTACTAATAACTCACTGTTGCATCCTAACATTTTTGAGTTACTGGTTACATGTTTTGAAGTCATTAGTAATCCGCAAAATTTAATTTCCGTAACTATCTGCTGTGAGTGAGCACTTGGAAATAGAACTAGAGTTTTCTGTTCTCTTATTTTCAGATCACCATTCCACTGCCGACCGAAAAAGGCATGAAATTAATATTAAATGCTGGAAATGGAGAATGCGTGCTTTACACCAGCCCTCTTGTTTCTGGAGAAGACCACCTTCTGCATCTCCCTTCATTTGACCAGCTAGCAACACCAGTAAACGCTGCTTACTTCTTAATTCTTGCAGTCCTAATCTTTGGGGGGTCCTTGGCTTGCTGCAAGTTTAGGAGGAGACATGCGGGTGGTATCCCATATCAAGAGCTTGAAATGGCACTGCCAGAATCTTCCTCAGCTGTCAACGTTGAGACTGCTGATGGTTGGGATCAGGGTTGGGATGATGACTGGGATGAAGAAAATGCTGTGAAATCACCAGGGGGGCGTCATATTGGAAGCATTTCAGCTAATGGCCTTACTGCTAGACCCAACAAAGATGGGTGGGAGAATGATTGGGATGTCTAG

mRNA sequence

ATGAGGCACAGAGGTTTGGCTGTTCTAGTCCTGAACAAAGGAGAAGATGCATTAGAAGTGAATGTTACGGGAGGAAACTTTTTCAAGGGGCTTAAGATTTTAAAACATCGTGCAGAAAGGATCACCATTCCACTGCCGACCGAAAAAGGCATGAAATTAATATTAAATGCTGGAAATGGAGAATGCGTGCTTTACACCAGCCCTCTTGTTTCTGGAGAAGACCACCTTCTGCATCTCCCTTCATTTGACCAGCTAGCAACACCAGTAAACGCTGCTTACTTCTTAATTCTTGCAGTCCTAATCTTTGGGGGGTCCTTGGCTTGCTGCAAGTTTAGGAGGAGACATGCGGGTGGTATCCCATATCAAGAGCTTGAAATGGCACTGCCAGAATCTTCCTCAGCTGTCAACGTTGAGACTGCTGATGGTTGGGATCAGGGTTGGGATGATGACTGGGATGAAGAAAATGCTGTGAAATCACCAGGGGGGCGTCATATTGGAAGCATTTCAGCTAATGGCCTTACTGCTAGACCCAACAAAGATGGGTGGGAGAATGATTGGGATGTCTAG

Coding sequence (CDS)

ATGAGGCACAGAGGTTTGGCTGTTCTAGTCCTGAACAAAGGAGAAGATGCATTAGAAGTGAATGTTACGGGAGGAAACTTTTTCAAGGGGCTTAAGATTTTAAAACATCGTGCAGAAAGGATCACCATTCCACTGCCGACCGAAAAAGGCATGAAATTAATATTAAATGCTGGAAATGGAGAATGCGTGCTTTACACCAGCCCTCTTGTTTCTGGAGAAGACCACCTTCTGCATCTCCCTTCATTTGACCAGCTAGCAACACCAGTAAACGCTGCTTACTTCTTAATTCTTGCAGTCCTAATCTTTGGGGGGTCCTTGGCTTGCTGCAAGTTTAGGAGGAGACATGCGGGTGGTATCCCATATCAAGAGCTTGAAATGGCACTGCCAGAATCTTCCTCAGCTGTCAACGTTGAGACTGCTGATGGTTGGGATCAGGGTTGGGATGATGACTGGGATGAAGAAAATGCTGTGAAATCACCAGGGGGGCGTCATATTGGAAGCATTTCAGCTAATGGCCTTACTGCTAGACCCAACAAAGATGGGTGGGAGAATGATTGGGATGTCTAG

Protein sequence

MRHRGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECVLYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQELEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWENDWDV

Homology

[Close]

BLAST of Lag0027351 vs. NCBI nr
Match: KAG7017185.1 (hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 349.0 bits (894), Expect = 2.6e-92
Identity = 169/185 (91.35%), Postives = 172/185 (92.97%), Query Frame = 0


Query: 4   RGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECV 63
           RGLAVLVLN+GED LEVNVTGGNFFKGLKILKH  ERITIPL TE  MKLIL+AGNGECV
Sbjct: 158 RGLAVLVLNEGEDPLEVNVTGGNFFKGLKILKHHKERITIPLTTETSMKLILDAGNGECV 217

Query: 64  LYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQE 123
           LY SPLVSGE+  LHLPSFDQLATPVN AYFLILAVLIFGGS ACCKFRRR AGGIPYQE
Sbjct: 218 LYRSPLVSGENLFLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAGGIPYQE 277

Query: 124 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 183
           LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTAR NKDGWE
Sbjct: 278 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARSNKDGWE 337

Query: 184 NDWDV 189
           NDWDV
Sbjct: 338 NDWDV 342

[Close]

BLAST of Lag0027351 vs. NCBI nr
Match: XP_023528429.1 (uncharacterized protein LOC111791362 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.4 bits (890), Expect = 7.5e-92
Identity = 167/185 (90.27%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 4   RGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECV 63
           RGLAVLVLN+GED LEVNVTGGNFFKGLKILKH  ERITIPL TE  MKLIL+AGNGECV
Sbjct: 158 RGLAVLVLNEGEDTLEVNVTGGNFFKGLKILKHHKERITIPLTTETSMKLILDAGNGECV 217

Query: 64  LYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQE 123
           LY SPLVSGE+  LHLPSFDQLATPVN AYFL LAVLIFGGS ACCKFRRR AGGIPYQE
Sbjct: 218 LYRSPLVSGENLFLHLPSFDQLATPVNGAYFLFLAVLIFGGSWACCKFRRRQAGGIPYQE 277

Query: 124 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 183
           LEMALPESSSAVN+ETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTAR NKDGWE
Sbjct: 278 LEMALPESSSAVNIETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARSNKDGWE 337

Query: 184 NDWDV 189
           NDWDV
Sbjct: 338 NDWDV 342

[Close]

BLAST of Lag0027351 vs. NCBI nr
Match: KAG6580427.1 (hypothetical protein SDJN03_20429, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.1 bits (889), Expect = 9.8e-92
Identity = 168/185 (90.81%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 4   RGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECV 63
           RGLAVLVLN+GED LEVNVTGGNFFKGLKILKH  ERITIPL TE   KLIL+AGNGECV
Sbjct: 184 RGLAVLVLNEGEDTLEVNVTGGNFFKGLKILKHHKERITIPLTTETSYKLILDAGNGECV 243

Query: 64  LYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQE 123
           LY SPLVSGE+  LHLPSFDQLATPVN AYFLILAVLIFGGS ACCKFRRR AGGIPYQE
Sbjct: 244 LYRSPLVSGENLFLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAGGIPYQE 303

Query: 124 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 183
           LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTAR NKDGWE
Sbjct: 304 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARSNKDGWE 363

Query: 184 NDWDV 189
           NDWDV
Sbjct: 364 NDWDV 368

[Close]

BLAST of Lag0027351 vs. NCBI nr
Match: XP_022935129.1 (uncharacterized protein LOC111442092 [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 9.8e-92
Identity = 168/185 (90.81%), Postives = 171/185 (92.43%), Query Frame = 0


Query: 4   RGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECV 63
           RGLAVLVLN+GED LEVNVTGGNFFKGLKILKH  ERITIPL TE   KLIL+AGNGECV
Sbjct: 158 RGLAVLVLNEGEDTLEVNVTGGNFFKGLKILKHHKERITIPLTTETSYKLILDAGNGECV 217

Query: 64  LYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQE 123
           LY SPLVSGE+  LHLPSFDQLATPVN AYFLILAVLIFGGS ACCKFRRR AGGIPYQE
Sbjct: 218 LYRSPLVSGENLFLHLPSFDQLATPVNGAYFLILAVLIFGGSWACCKFRRRQAGGIPYQE 277

Query: 124 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 183
           LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTAR NKDGWE
Sbjct: 278 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARSNKDGWE 337

Query: 184 NDWDV 189
           NDWDV
Sbjct: 338 NDWDV 342

[Close]

BLAST of Lag0027351 vs. NCBI nr
Match: XP_022941631.1 (uncharacterized protein LOC111446930 [Cucurbita moschata])

HSP 1 Score: 339.0 bits (868), Expect = 2.7e-89
Identity = 163/185 (88.11%), Postives = 170/185 (91.89%), Query Frame = 0


Query: 4   RGLAVLVLNKGEDALEVNVTGGNFFKGLKILKHRAERITIPLPTEKGMKLILNAGNGECV 63
           + LAVLVLNKGED L+VNVTGGNFFKGLKILKH ++RITIPL T K MKL+L+AGNGECV
Sbjct: 157 KDLAVLVLNKGEDTLDVNVTGGNFFKGLKILKHHSKRITIPLTTLKDMKLVLDAGNGECV 216

Query: 64  LYTSPLVSGEDHLLHLPSFDQLATPVNAAYFLILAVLIFGGSLACCKFRRRHAGGIPYQE 123
           LYTSPLVSGED  LHLPSFDQL TPVN AYFLILAVLIFGGS AC K RRR AGGIPYQE
Sbjct: 217 LYTSPLVSGEDLFLHLPSFDQLVTPVNGAYFLILAVLIFGGSWACFKLRRRQAGGIPYQE 276

Query: 124 LEMALPESSSAVNVETADGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 183
           LEMALPESSSAV VETA+GWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE
Sbjct: 277 LEMALPESSSAVKVETAEGWDQGWDDDWDEENAVKSPGGRHIGSISANGLTARPNKDGWE 336

Query: 184 NDWDV 189
           NDWDV
Sbjct: 337 NDWDV 341

The following BLAST results are available for this feature:

BLAST of Lag0027351 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017185.1	2.6e-92	91.35	hypothetical protein SDJN02_19047 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023528429.1	7.5e-92	90.27	uncharacterized protein LOC111791362 [Cucurbita pepo subsp. pepo]	[more]
KAG6580427.1	9.8e-92	90.81	hypothetical protein SDJN03_20429, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022935129.1	9.8e-92	90.81	uncharacterized protein LOC111442092 [Cucurbita moschata]	[more]
XP_022941631.1	2.7e-89	88.11	uncharacterized protein LOC111446930 [Cucurbita moschata]	[more]

BLAST of Lag0027351 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..188
None	No IPR available	PANTHER	PTHR34200	DENTIN SIALOPHOSPHOPROTEIN-LIKE ISOFORM X1	coord: 4..187
None	No IPR available	PANTHER	PTHR34200:SF2	TRANSMEMBRANE PROTEIN	coord: 4..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027351.1	Lag0027351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane