Lag0027297 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAGAGCCAAAGACCAGAGTCTATAAAACGCCATTCCATAACGAAACAAAACCACCGACCCGAAAAAGAAAAGCTCAATCGATCAGTTTATTTTGAAGCCATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCCATAGATCACGAAGGAAGATTGCCGAGAAAGTACACGTCGGAGGGCCAAGGGGCGCAGAAGAACAAATCTCCGCCGTTGGAATGGTACAATGTACCACAAGGGACCAAGAGCTTAGCCCTTGTGGTGCAGGACATCGACGCGCCGGACCCCAGTGGCCCCATCGTGCCCTGGACCGTGTGGGTGGTTGTGAATATACCGCCGAGCTTGAAGGGCCTGCCCGAAGATTTCTCCGGGAAGCAGGAGGGGCTGACCGGTGATTATGCGGCTATTCAAGAGGGGAATAATGACGAGAAAATCCCGGGTTGGCGCGCCCCCACTCTGCCCTCGCATGGCCACCGGTTCGAGTTCAAGCTCTACGCTTTGGATAATCAGTTGAACCTTGGGAATAAGGTAATTTCACTAATTTTCTTTTCTGTATTAGACCTTTAAATACCAAAAGAAAAAGAACAAAACTTCATACCGGTATGTGGGCATTAAAATTCTAAATACACGCAGGCAAGTTTTTCCCAAAGAAAAAATAAAGAAAAGTTTTTCCCAAAGAAAAAAGAAAGAAAAAGACTACCTACCGGTGTAGGAGAAATGTTGAAACACATCCTCGATTAGTATCCAATTTTGTGGGTTGATTTGTACATTGATTTGATGCATTGGAAGTTAAAAAGAACAAAATTGATTAACTCTTTAAAAAAAGGGATAGATTCGAATAGCTCAATTACCCTTGAGCTAAGCTCAATTACCCCCTTGAGCTAAGCTCACTCTCACTTTAGTTACAGGAACTATAAATTATTAGTACAGGAACTAAACAGGAACTAAATTATTAGTTATTAAAGTACAGAACTAAATCTGTTATTTTTTTTTTAGAGACTAAAAGTGATTTTTAACCCAAAAAAAAAAAAAAAAAAAAATTGATTAATTTATTTTTAATAATTTTTTCTTAACGATTTTAAATAATGATTCCATTCCTTGAGATGCAGGCGACAAAGGACAAGCTTTTAGACGCAGTAGAAGGACACGTGCTGGGAGAAGCAGTTCTAATGGCAGTCTTCTGA ATGGCCAAGAGCCAAAGACCAGAGTCTATAAAACGCCATTCCATAACGAAACAAAACCACCGACCCGAAAAAGAAAAGCTCAATCGATCAGTTTATTTTGAAGCCATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCCATAGATCACGAAGGAAGATTGCCGAGAAAGTACACGTCGGAGGGCCAAGGGGCGCAGAAGAACAAATCTCCGCCGTTGGAATGGTACAATGTACCACAAGGGACCAAGAGCTTAGCCCTTGTGGTGCAGGACATCGACGCGCCGGACCCCAGTGGCCCCATCGTGCCCTGGACCGTGTGGGTGGTTGTGAATATACCGCCGAGCTTGAAGGGCCTGCCCGAAGATTTCTCCGGGAAGCAGGAGGGGCTGACCGGTGATTATGCGGCTATTCAAGAGGGGAATAATGACGAGAAAATCCCGGGTTGGCGCGCCCCCACTCTGCCCTCGCATGGCCACCGGTTCGAGTTCAAGCTCTACGCTTTGGATAATCAGTTGAACCTTGGGAATAAGGCGACAAAGGACAAGCTTTTAGACGCAGTAGAAGGACACGTGCTGGGAGAAGCAGTTCTAATGGCAGTCTTCTGA ATGGCCAAGAGCCAAAGACCAGAGTCTATAAAACGCCATTCCATAACGAAACAAAACCACCGACCCGAAAAAGAAAAGCTCAATCGATCAGTTTATTTTGAAGCCATGGCCGACAGCGAGGAGTTCAGGCTGGCGTCTTCAGCCATAGATCACGAAGGAAGATTGCCGAGAAAGTACACGTCGGAGGGCCAAGGGGCGCAGAAGAACAAATCTCCGCCGTTGGAATGGTACAATGTACCACAAGGGACCAAGAGCTTAGCCCTTGTGGTGCAGGACATCGACGCGCCGGACCCCAGTGGCCCCATCGTGCCCTGGACCGTGTGGGTGGTTGTGAATATACCGCCGAGCTTGAAGGGCCTGCCCGAAGATTTCTCCGGGAAGCAGGAGGGGCTGACCGGTGATTATGCGGCTATTCAAGAGGGGAATAATGACGAGAAAATCCCGGGTTGGCGCGCCCCCACTCTGCCCTCGCATGGCCACCGGTTCGAGTTCAAGCTCTACGCTTTGGATAATCAGTTGAACCTTGGGAATAAGGCGACAAAGGACAAGCTTTTAGACGCAGTAGAAGGACACGTGCTGGGAGAAGCAGTTCTAATGGCAGTCTTCTGA MAKSQRPESIKRHSITKQNHRPEKEKLNRSVYFEAMADSEEFRLASSAIDHEGRLPRKYTSEGQGAQKNKSPPLEWYNVPQGTKSLALVVQDIDAPDPSGPIVPWTVWVVVNIPPSLKGLPEDFSGKQEGLTGDYAAIQEGNNDEKIPGWRAPTLPSHGHRFEFKLYALDNQLNLGNKATKDKLLDAVEGHVLGEAVLMAVF Homology
BLAST of Lag0027297 vs. NCBI nr
Match: XP_022145739.1 (uncharacterized protein LOC111015122 [Momordica charantia]) HSP 1 Score: 323.2 bits (827), Expect = 1.6e-84 Identity = 153/167 (91.62%), Postives = 160/167 (95.81%), Query Frame = 0
BLAST of Lag0027297 vs. NCBI nr
Match: XP_038904153.1 (UPF0098 protein TC_0109 [Benincasa hispida]) HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84 Identity = 152/167 (91.02%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of Lag0027297 vs. NCBI nr
Match: XP_004137699.1 (uncharacterized protein LOC101207571 [Cucumis sativus] >KGN58730.1 hypothetical protein Csa_002062 [Cucumis sativus]) HSP 1 Score: 320.9 bits (821), Expect = 8.1e-84 Identity = 150/167 (89.82%), Postives = 160/167 (95.81%), Query Frame = 0
BLAST of Lag0027297 vs. NCBI nr
Match: XP_008442384.1 (PREDICTED: UPF0098 protein TC_0109 [Cucumis melo] >KAA0044193.1 UPF0098 protein [Cucumis melo var. makuwa] >TYK24939.1 UPF0098 protein [Cucumis melo var. makuwa]) HSP 1 Score: 317.4 bits (812), Expect = 9.0e-83 Identity = 148/167 (88.62%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of Lag0027297 vs. NCBI nr
Match: XP_023529183.1 (uncharacterized protein LOC111791902 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 314.7 bits (805), Expect = 5.8e-82 Identity = 148/167 (88.62%), Postives = 159/167 (95.21%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy Swiss-Prot
Match: O26373 (UPF0098 protein MTH_273 OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_273 PE=3 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.8e-25 Identity = 69/159 (43.40%), Postives = 92/159 (57.86%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy Swiss-Prot
Match: Q9PLJ0 (UPF0098 protein TC_0109 OS=Chlamydia muridarum (strain MoPn / Nigg) OX=243161 GN=TC_0109 PE=3 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 3.4e-16 Identity = 55/160 (34.38%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy Swiss-Prot
Match: O84741 (UPF0098 protein CT_736 OS=Chlamydia trachomatis (strain D/UW-3/Cx) OX=272561 GN=CT_736 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 7.5e-16 Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy Swiss-Prot
Match: Q9Z729 (UPF0098 protein CPn_0877/CP_0992/CPj0877/CpB0906 OS=Chlamydia pneumoniae OX=83558 GN=CPn_0877 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.2e-15 Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy Swiss-Prot
Match: Q9UZJ3 (UPF0098 protein PYRAB11530 OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=PYRAB11530 PE=3 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14 Identity = 54/165 (32.73%), Postives = 85/165 (51.52%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy TrEMBL
Match: A0A6J1CW59 (uncharacterized protein LOC111015122 OS=Momordica charantia OX=3673 GN=LOC111015122 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 7.9e-85 Identity = 153/167 (91.62%), Postives = 160/167 (95.81%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy TrEMBL
Match: A0A0A0L9T7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G730940 PE=4 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.9e-84 Identity = 150/167 (89.82%), Postives = 160/167 (95.81%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy TrEMBL
Match: A0A5A7TL06 (UPF0098 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00550 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.3e-83 Identity = 148/167 (88.62%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy TrEMBL
Match: A0A1S3B537 (UPF0098 protein TC_0109 OS=Cucumis melo OX=3656 GN=LOC103486265 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 4.3e-83 Identity = 148/167 (88.62%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of Lag0027297 vs. ExPASy TrEMBL
Match: A0A6J1IX32 (uncharacterized protein LOC111481441 OS=Cucurbita maxima OX=3661 GN=LOC111481441 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 6.9e-81 Identity = 146/167 (87.43%), Postives = 158/167 (94.61%), Query Frame = 0
BLAST of Lag0027297 vs. TAIR 10
Match: AT5G01300.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 240.7 bits (613), Expect = 9.9e-64 Identity = 110/160 (68.75%), Postives = 135/160 (84.38%), Query Frame = 0
BLAST of Lag0027297 vs. TAIR 10
Match: AT5G01300.2 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 189.1 bits (479), Expect = 3.4e-48 Identity = 85/122 (69.67%), Postives = 105/122 (86.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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