
Lag0027276 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCGAACTCAGATAGTTCTCTTAGGGCTTCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGGTGAATGATTTCATGTTTGATTGGATTAATCTTGATTTTTGTTCGTGTTTTGTGATGTTCAGCAACTTAATTTGTTGTCTCGGTTTTGGAATGCAGAAACGGACGGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGGTAGTTCGTCCTTTTGATTATCAACTTTTGTGTTTATCTGGTTCATTTTGGGCGGAAAGTGAGTGAATCAAGCGTTTATGTGATTTTCCTTTCCTATGTGTTTCTCTCTTCTCCGGTTTTCGTCCTTTCTGATTACGCTTAAAATTGCGGTAAGCTTATAGTTAAGTAAAACTCGATTTCTTTTTTTCAGCACAGGTTTCTTTATTGTTGTTAACTTCTTTGATTGAATGAACATTTCAATTTCTCTCTCTTTAGTGGTTGTTGATAGTCACTATGATGAAAAACTGGTTGTACTCTGGAATCTTCGTTGCTGATCTTCCGTTAAACTCGAGTTCTTTGTTTTTTTTTTGTTTTTCTTTTCCACAGCGCAGGTCTCTTTTATTATCTTTGACTTTAACTTCCTTCCTCGGTTGAACAAACGTTTCGATTTTTCTACTCTCTAGTGGTTGTTGAAAGTAATTATGATGAACAATTGGTTGTACTTTGGAATCTTCCGTTTTGTTTTCCTTTAAACTCGATTTCTTTGTTTTTAATTTTCTTCTTTAAGCATAGGTTTCTTTTATTACCTTTAACTTCCTCGAGTGAACAAACATTTCGATTTCTCTACTACCTAGTGGTTGCTGAGAGTCATTATGATGAAAAATTAGTAGTGCTTAGGAATCTGAATTTGTTGTTCCTTTGAAGATGATTTCTTTTTTCTTTGATTAGCACAGGTTTCTTTTATCAGTAACATCCTTGATTGAACTAATATTTCAATTTCTCCACTCTCTCGTGATTGTTGACAGTCGTTGTTATGATAAACTCTGCTTCACTGTCGTTGTTCCGTTAAACATGATTTCTTAGTGGTTTTTTTAAATTTTATTTTTAATTTTTGACGTCTAATTTTATTTTTAACTCAAGTTTATTTTATCATCGTTAACTTCCTCAGTTGAACAAACATCTCAATTTCTCTACTCTCTAGCGGCTGTTGAGAGTCATTATAATAAAAAACTGGTTGTGCTCTTCTTCACCGTTGTTGTTCCTCTTTGAATGTTTTTTCTTGTTAAAGAACGTGAGTCTTGAACGAACATAGTTGCAGACCTAGATTCATAGATGATTTGTAATAATTCCATATGGAGCCAACTTCACTATGTTAGGTTATCTGATTTAGAGCAAGACATAAATGGAAGTTTCAATTGACCTCCGTTGTTTGAGATCATAATAAAATGAAGTTATTTATAACATGCTTTAGTGTTTCCATTCATAAGCAACTTCAGTAGATTATGTTTTGCAAGATTAATTTCATTTAGGTTTAAAAACAGGTTAATGTTGCGAACTCCCAATGTTTAACTTTGGGACAAAAAGGGAACTCGTTTCTGGATGATAGATTTTTGGTCTCTACTCATAGGGGCTTAAGAATTGAGCACAAGTCTAATTAGAATAGAATTGACTTCATAATTCTTTGTTGATACAAGTGGGGGAATAGATCATGCCAATGTTCTTCATGGAGTAAATATTTTGTCTTCGCTTTATTGTATCAAAGAAACATCTGATAGGCACCAATTAGAAGTGTTGGTTATCATGTCAAAACCTGCCGGCAGTTTGAACTTTGATATGTGTTAAAGAGATTCTTTTCCTCCCCTACTAATAGGAAATGTTCAGAAGTTTTGCGCATGCATTTTTGATCCATACGTTTTGGGGTTTGCTCTTTGAGATGTAGTTGTGCCTTCATGTTATCTCAATTTGTGGCAGTGCTTGATGTGAAATAATTTTACACTTCTTGTGGCAGAGGTACTGCTATAAACATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCACCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTAAGATTCCTTTGAAAGCTCATTTTGTTTTTTTTTGGTGAGATGATTGTTTACTGATAGTATTCATTTTCTGTGAAGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTCTTAGGGCTTCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGACGGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGTACTGCTATAAACATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCACCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTCTTAGGGCTTCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACTCCTCCGCCTCCGAAACCTGCCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAATCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGACGGGAATCGGAGGAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTACAGAGGTACTGCTATAAACATGAAAAATATGCTGGAGTCATCATTTCCTGGAGTTGAGGTTATTTTGGCAAATTACCCCCCACCGCTTCCAAAGCGCCTTCTTAGTAAAGTAGTACCTGTCGTTCAATTTGGTATTATTGGAACAATAATGGCGGGGGAACAGATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTATTATTCCTTGCGGGCAAATAGGTTTGGAAGCATTGCTAGCACTTGGCTGTTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCCGGAGCCTTCGAAGTGTATTGCAATGGTGAAATGGTCTTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACGCTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACTCTGGAGTTTGGTCATAG MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPANHPPPRVHYQPKSQSVIQEPLEFPTEKRTGIGGIGQGSVININFCVSCSYRGTAINMKNMLESSFPGVEVILANYPPPLPKRLLSKVVPVVQFGIIGTIMAGEQIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDAIGRKLSGSRFVDNSGVWS Homology
BLAST of Lag0027276 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437.2 bits (1123), Expect = 8.7e-119 Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of Lag0027276 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida]) HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118 Identity = 218/227 (96.04%), Postives = 220/227 (96.92%), Query Frame = 0
BLAST of Lag0027276 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima]) HSP 1 Score: 434.1 bits (1115), Expect = 7.3e-118 Identity = 213/226 (94.25%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Lag0027276 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 433.7 bits (1114), Expect = 9.6e-118 Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of Lag0027276 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus]) HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114 Identity = 211/227 (92.95%), Postives = 213/227 (93.83%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2) HSP 1 Score: 287.0 bits (733), Expect = 1.9e-76 Identity = 140/209 (66.99%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.6e-21 Identity = 48/142 (33.80%), Postives = 81/142 (57.04%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 1.6e-14 Identity = 40/145 (27.59%), Postives = 72/145 (49.66%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 4.6e-14 Identity = 46/144 (31.94%), Postives = 74/144 (51.39%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 38/142 (26.76%), Postives = 68/142 (47.89%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 4.2e-119 Identity = 214/226 (94.69%), Postives = 218/226 (96.46%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy TrEMBL
Match: A0A6J1IZR1 (selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482133 PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 3.5e-118 Identity = 213/226 (94.25%), Postives = 217/226 (96.02%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118 Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118 Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of Lag0027276 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 4.6e-118 Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0
BLAST of Lag0027276 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type ) HSP 1 Score: 300.8 bits (769), Expect = 9.0e-82 Identity = 143/218 (65.60%), Postives = 180/218 (82.57%), Query Frame = 0
BLAST of Lag0027276 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type ) HSP 1 Score: 294.3 bits (752), Expect = 8.4e-80 Identity = 142/218 (65.14%), Postives = 179/218 (82.11%), Query Frame = 0
BLAST of Lag0027276 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor ) HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77 Identity = 140/209 (66.99%), Postives = 167/209 (79.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|