Lag0027216 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027216
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr10: 45919065 .. 45923395 (+)
RNA-Seq Expression	Lag0027216
Synteny	Lag0027216

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGAGCCCATTAAACCCAAACGGGTATTCGGTCCAATAAAAAGAAGTTGGGATCTGATCCAAGATTGGTGAACCCAAAGAGGCACCATCTTGAGGGGACATGTTGAGGATCCCACATCGAAAAGATTAGTGGAGACCTCACAATATATAACTTCAAGGGTCACTCCACTCATTGCCAATTGGTTTTGAGATGGAAGCCCATATAATATAATATGGTATCAGAGCTCTGACTCTTCACCAGTCGTCACCCCATCTACACCAATTACAACTCCGATTGTAACTCCCATTGCCCAGCAGCCTCGACAAAACCTAGCACCTCAACAGCCCCAAATTCGACCTAATACGCCTTCTTCCCAGACTCCTTTTAATCCCTATCAATCGCCCCCCCCCTTTACCCTACCTCACCAAATTTCTTCCAACCTTATTACCCATCTTCCTTTCCACGACCTCAGGCCCCTCAATTTTTTCAACCTCCTCAGCTTGCGAATCCGCTGCCCTTTACTCCTAATCCCTACCCGACACTACCTCAACCTCTGAATGTCAAATTGAATGATACGAACTTCCTATTGTGGAAGAACCAATTGCTCAATGCTGTCCTCGCCAATGGTCTCCATGGGTTTCTCGATGGCTCTGTTCCAGCGCCTCCAAAGTTTCTTGATGAACATCAGTCACAACCGAATCCTGAATTCACTACATGGGAAAGGTACAATCGCTTCATTATGTGTTGGATTTATTCATACCTTTCCGAAGAGAAGATGGGCGAAATTGTAAGTCTGAATACTGCTTCTGAAATCTGGTCTTCTTTAACTCGTGCGTATGATTCTAAAACTACAGCTCGAATTATGGGTCTTAAAACTCAACTCCACCGTATTAGAAAAGATGGTCTCACTGTTAGTCAGTATCTATCTCAGATTAAGGATATTGCGGATAAATTTTCAGCAATAGGGGAACCGATTTCTTATAGGGATCACTTAGCTCACATATTAGATGGCCTTGGGAGTGAATATAATGCTTTTGTGACATCTATACAAAATCGTTCTGATTGTCCTGCTTTAGAAGATGTGCGTAGTCTTTTGTTGGCATATGAAGCTCGGTTAGAAAAGCAAAATAGCGTAGACCAACTTAACCTCGCTCAGGCTAATTTTGCTACTCTTAATCTCAATAACACTGGCCGCTGCACCCCTTCTCGTGCTTCCTCTAATAACATAATTCGACCTCCCTTCAATCCATTCTCGGCTTTCCCTACCTCAAACAACAATGTTTCTTCTAGCATCCTAGGAAAACCTCAGTCACAACCCCTCCAAAAATGGCCTCAAAAATCAAATCCTAATCGCCCACAGTGCCAAATATGTGGCAAATTTGGGCACACAGCCCTTATTTGCCACCATCGCACCAATTTGGCTTACCACACAGCTCCTCCACAAGCCTTACTTTCCTCATCCAATGTCCATCTTCCTTCTCCTGACTCCATCTCCACTTTTTCCACGGATTCATATCACCCAGACGAAAATTGGTTCTTAGACTCCGGAGCCACGCATCATATGACCCCGGATGCTACATCTCTCACTCATTCCATACCTTATGTTGGTGGTGAACATGTTACTGTTGGGGATGGTAAGAATATTTCTATCTCTCTCATTGGTTCTCAATATTTACATTCTTTCTCTTCTAAACCAATTTATCTTGATTCCGTTCTTTATACTCCTGCTATTACTAAGAAATTATTGAGTGTTGCTCGGCTTTGCAAAGATAACCAAGCATTTGTTGAATTTTACTCTTCTTTTTTCCTTGTTAAGGACCTTCGAACCAAGCAAATTATGCTCAAGGGAATCCTTGAGGATGGTCTATATCGGTTGTCTGCTGTCTCTGCTTCTCCTGTTCAGCCACCTTCCTCCGCTGCTCTTTCATCTCCTTCCGTTTTTTTGGCATCTGTTAAGGCTCAACATTGGCATTTGAGGTTGGGGACATCCAGCTGCTTCAACTTTGGGCCAAGTTTTGTCTTTGTTTCGTTTGTCTTCTGGTCATTCCAATGTTTTTTGTAACTCTTGTAAAATGGCTAAAAGCCATCGGTTGCCTTTTTCTCTAGCTGATACTAAGTCTTCTAAACCTTTTGAACTCGTGCACTCTGATGTATGGGGGCCTTCCCCTATTGTCTCTATTAATGGAGCCCGTTATTTTCTCTTATTTGTTGATGATTTTACACCTTAAAAAAACAAAGGGTGCGTTTGGAATACTTTTTAATTTAAGTGTTTTTAAAGAATGCATTTTATTATAAACATTTTGCATAAAAATGATTTAAAATTTAAACACTCATATGTTTGATTTTTGTTCATAAGTGTTTTTATACCCAAATTACTATATGCTTAACAACTCTTTTTTTTTTAAAAAAAAGTTGCTTTAAAGTGTTTCTCTCAAAATGTATTATTTTTCAATTTCATTTTTTAATAAGTCATTTTTAGTGGTTGCCAAACACTATAATTTTTTTCAAAATGATTTTTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCAAAGATACATGCAAATACCTTATTTTTCGTTTATAAATTTAACGAAAAAAGCCTTTGAGAGTTGATTTAAAACAAACTTCAAATTTCAAAGTTTAAAATAAAACTTTTCAAAGTTTGTGGTATAATTAAAATCAATCTTACAGTTCATGGGTATTTTTAACAAGTTAACAAAAGAAAAAATCGATTTGATTTATTTAATTTATTTACTAACTTTTTAAAATGTTTTTTTTTCCCCTCTTTCTCAAAGAGAAATTTCACACTTTGATTTTATCTAATTGAATGCACACTTCTTTGAACTAAAATCTATCAAAAATGAAAATTACAACAATTTAAGGTGTAATTTGTTAAAACTATAAGTCCATGATTAAAAGTCAAAGCGAGCCTAACTCAGCGGTAATTGACATATACCCTCGACCATGAGGTCAGAGGTTCGAATCTCCCCACCCCCAAATGTTGATGTACTCAAACACAAAAAAAAAAAAAAAAAAAAAAAAAAACCTTATTAAACTCAATGTAAAAAATAAATTATCTTTCATTTAAAAAATCTTCAATATTTTATATTTCTGTACTTTTAAAAGGTTGTTAAATGGAGTGTGAAAGAAAATGATGGATGAATAAACAAATTCAAAATGAACTTAATCTAGATATGTGAACTCTAACTCCTTCTAAACCAAAGAGGAAATCCAATATGATAAAGCATTTTGCCGACAGAAAGAATACTCTTCCAACATGGAAGAGGGGAAAAGCTCAAAACGATCGACACTCCTATCAACTACATCGGACAATCGGGACTCCATTGTGCTTTAAAAAGTTGATATACATTCATAGTCCTTCCCCATCTAGAGTTGTTTGGCAACGATGAGTGGATTAAAAGAGTACGTATTTAGAGTGTAGAGTTGTTTAGTATTTGTCAAAGTTCCTAGTGGATTTAAAAACTAAATCAACTTAAAAATTCAAATCCAAAAACCAGATTCAAAACCTTGGGGCGATCCATTTGCAGCAAAGTCGTCGTGGATGAACAAAAGCCACAAACTCCTTCTCAAACCACCGCCACTTATTCCATGGCTGAACTTCCCAATTGCAAATCCAACCCCCTTCTTCAAGCAACCGCCTTTCTTCTCAACGTATAAATCAGCAGCAACCCCTGAATCTTCGTCATTATCGACATCTAAGTTTCCTGAAGATGGGTTTGATTTTTGGGAAGATCACTGTCGAAACCCCCAAATTTGAGCTGATTCAATCCACCAACGACTACGAAATCCGCAAATACGAGCCATCGGTGGTGGCCGAAGTCACCTACGATCCGACCCAGTTCAGAGGCAACAGAGACGGTGGCTTCACTGTATTGGCCAAGTACATTGGCGCCATCGGCGAGCCACAGAACATCAAGTCCGAGAAAGTGGCCATGACGGCGCCGGTGATCACCAAATCGGAGAAGATTTCGATGACAGCTCCGGTGGTAACGGCTGGCGGCGGCGGCAGCGAGGGGAAGCCAGTGACGATGCAGTTTGTGCTGCCGAGCAAGTACAAGAAGGCAGAGGAAGCTCCAAAGCCGGCTGATGAAAGTGTTGTGATAAGGGAAGAAGGGGAGAGGAAACTCGCCGTCGTGAGATTCAGTGGAATTGCGACGGAGGGAGTGGTGGCGCAGAAGGTGGAGAATCTGAAGAAAAGCTTGGAGAAAGATGGGTATAAAGTGATTGGGGATTTTGTGTTGGCTAGATATAACCCACCATGGACATTGCCTTCTTTGAGAACCAATGAAGTCATGATACCAGTAGAATGA

mRNA sequence

ATGGTATCAGAGCCCATTAAACCCAAACGGGCCCCTCAATTTTTTCAACCTCCTCAGCTTGCGAATCCGCTGCCCTTTACTCCTAATCCCTACCCGACACTACCTCAACCTCTGAATGTCAAATTGAATGATACGAACTTCCTATTGTGGAAGAACCAATTGCTCAATGCTGTCCTCGCCAATGGTCTCCATGGGTTTCTCGATGGCTCTGTTCCAGCGCCTCCAAAGTTTCTTGATGAACATCAGTCACAACCGAATCCTGAATTCACTACATGGGAAAGGTACAATCGCTTCATTATGTGTTGGATTTATTCATACCTTTCCGAAGAGAAGATGGGCGAAATTGTAAGTCTGAATACTGCTTCTGAAATCTGGTCTTCTTTAACTCGTGCGTATGATTCTAAAACTACAGCTCGAATTATGGGTCTTAAAACTCAACTCCACCGTATTAGAAAAGATGGTCTCACTGTTAGTCAGTATCTATCTCAGATTAAGGATATTGCGGATAAATTTTCAGCAATAGGGGAACCGATTTCTTATAGGGATCACTTAGCTCACATATTAGATGGCCTTGGGAGTGAATATAATGCTTTTGTGACATCTATACAAAATCGTTCTGATTGTCCTGCTTTAGAAGATGTGCGTAGTCTTTTGTTGGCATATGAAGCTCGGTTAGAAAAGCAAAATAGCGTAGACCAACTTAACCTCGCTCAGGCTAATTTTGCTACTCTTAATCTCAATAACACTGGCCGCTGCACCCCTTCTCGTGCTTCCTCTAATAACATAATTCGACCTCCCTTCAATCCATTCTCGGCTTTCCCTACCTCAAACAACAATGTTTCTTCTAGCATCCTAGGAAAACCTCAGTCACAACCCCTCCAAAAATGGCCTCAAAAATCAAATCCTAATCGCCCACAGTGCCAAATATGTGGCAAATTTGGGCACACAGCCCTTATTTGCCACCATCGCACCAATTTGGCTTACCACACAGCTCCTCCACAAGCCTTACTTTCCTCATCCAATGTCCATCTTCCTTCTCCTGACTCCATCTCCACTTTTTCCACGGATTCATATCACCCAGACGAAAATTGGTTCTTAGACTCCGGAGCCACGCATCATATGACCCCGGATGCTACATCTCTCACTCATTCCATACCTTATGTTGGTGGTGAACATGTTACTGTTGGGGATGGTAAGAATATTTCTATCTCTCTCATTGGTTCTCAATATTTACATTCTTTCTCTTCTAAACCAATTTATCTTGATTCCGTTCTTTATACTCCTGCTATTACTAAGAAATTATTGAGTGTTGCTCGGCTTTGCAAAGATAACCAAGCATTTGTTGAATTTTACTCTTCTTTTTTCCTTGTTAAGGACCTTCGAACCAAGCAAATTATGCTCAAGGGAATCCTTGAGGATGGTCTATATCGGTTGTCTGCTGTCTCTGCTTCTCCTGTTCAGCCACCTTCCTCCGCTGCTCTTTCATCTCCTTCCGTTTTTTTGGCATCTGTTAAGGCTCAACATTGGCATTTGAGGTTGGGGACATCCAGCTGCTTCAACTTTGGGCCAAGTTTTGTCTTTGTTTCGTTTGTCTTCTGCAAAGTCGTCGTGGATGAACAAAAGCCACAAACTCCTTCTCAAACCACCGCCACTTATTCCATGGCTGAACTTCCCAATTGCAAATCCAACCCCCTTCTTCAAGCAACCGCCTTTCTTCTCAACATCACTGTCGAAACCCCCAAATTTGAGCTGATTCAATCCACCAACGACTACGAAATCCGCAAATACGAGCCATCGGTGGTGGCCGAAGTCACCTACGATCCGACCCAGTTCAGAGGCAACAGAGACGGTGGCTTCACTGTATTGGCCAAGTACATTGGCGCCATCGGCGAGCCACAGAACATCAAGTCCGAGAAAGTGGCCATGACGGCGCCGGTGATCACCAAATCGGAGAAGATTTCGATGACAGCTCCGGTGGTAACGGCTGGCGGCGGCGGCAGCGAGGGGAAGCCAGTGACGATGCAGTTTGTGCTGCCGAGCAAGTACAAGAAGGCAGAGGAAGCTCCAAAGCCGGCTGATGAAAGTGTTGTGATAAGGGAAGAAGGGGAGAGGAAACTCGCCGTCGTGAGATTCAGTGGAATTGCGACGGAGGGAGTGGTGGCGCAGAAGGTGGAGAATCTGAAGAAAAGCTTGGAGAAAGATGGGTATAAAGTGATTGGGGATTTTGTGTTGGCTAGATATAACCCACCATGGACATTGCCTTCTTTGAGAACCAATGAAGTCATGATACCAGTAGAATGA

Coding sequence (CDS)

ATGGTATCAGAGCCCATTAAACCCAAACGGGCCCCTCAATTTTTTCAACCTCCTCAGCTTGCGAATCCGCTGCCCTTTACTCCTAATCCCTACCCGACACTACCTCAACCTCTGAATGTCAAATTGAATGATACGAACTTCCTATTGTGGAAGAACCAATTGCTCAATGCTGTCCTCGCCAATGGTCTCCATGGGTTTCTCGATGGCTCTGTTCCAGCGCCTCCAAAGTTTCTTGATGAACATCAGTCACAACCGAATCCTGAATTCACTACATGGGAAAGGTACAATCGCTTCATTATGTGTTGGATTTATTCATACCTTTCCGAAGAGAAGATGGGCGAAATTGTAAGTCTGAATACTGCTTCTGAAATCTGGTCTTCTTTAACTCGTGCGTATGATTCTAAAACTACAGCTCGAATTATGGGTCTTAAAACTCAACTCCACCGTATTAGAAAAGATGGTCTCACTGTTAGTCAGTATCTATCTCAGATTAAGGATATTGCGGATAAATTTTCAGCAATAGGGGAACCGATTTCTTATAGGGATCACTTAGCTCACATATTAGATGGCCTTGGGAGTGAATATAATGCTTTTGTGACATCTATACAAAATCGTTCTGATTGTCCTGCTTTAGAAGATGTGCGTAGTCTTTTGTTGGCATATGAAGCTCGGTTAGAAAAGCAAAATAGCGTAGACCAACTTAACCTCGCTCAGGCTAATTTTGCTACTCTTAATCTCAATAACACTGGCCGCTGCACCCCTTCTCGTGCTTCCTCTAATAACATAATTCGACCTCCCTTCAATCCATTCTCGGCTTTCCCTACCTCAAACAACAATGTTTCTTCTAGCATCCTAGGAAAACCTCAGTCACAACCCCTCCAAAAATGGCCTCAAAAATCAAATCCTAATCGCCCACAGTGCCAAATATGTGGCAAATTTGGGCACACAGCCCTTATTTGCCACCATCGCACCAATTTGGCTTACCACACAGCTCCTCCACAAGCCTTACTTTCCTCATCCAATGTCCATCTTCCTTCTCCTGACTCCATCTCCACTTTTTCCACGGATTCATATCACCCAGACGAAAATTGGTTCTTAGACTCCGGAGCCACGCATCATATGACCCCGGATGCTACATCTCTCACTCATTCCATACCTTATGTTGGTGGTGAACATGTTACTGTTGGGGATGGTAAGAATATTTCTATCTCTCTCATTGGTTCTCAATATTTACATTCTTTCTCTTCTAAACCAATTTATCTTGATTCCGTTCTTTATACTCCTGCTATTACTAAGAAATTATTGAGTGTTGCTCGGCTTTGCAAAGATAACCAAGCATTTGTTGAATTTTACTCTTCTTTTTTCCTTGTTAAGGACCTTCGAACCAAGCAAATTATGCTCAAGGGAATCCTTGAGGATGGTCTATATCGGTTGTCTGCTGTCTCTGCTTCTCCTGTTCAGCCACCTTCCTCCGCTGCTCTTTCATCTCCTTCCGTTTTTTTGGCATCTGTTAAGGCTCAACATTGGCATTTGAGGTTGGGGACATCCAGCTGCTTCAACTTTGGGCCAAGTTTTGTCTTTGTTTCGTTTGTCTTCTGCAAAGTCGTCGTGGATGAACAAAAGCCACAAACTCCTTCTCAAACCACCGCCACTTATTCCATGGCTGAACTTCCCAATTGCAAATCCAACCCCCTTCTTCAAGCAACCGCCTTTCTTCTCAACATCACTGTCGAAACCCCCAAATTTGAGCTGATTCAATCCACCAACGACTACGAAATCCGCAAATACGAGCCATCGGTGGTGGCCGAAGTCACCTACGATCCGACCCAGTTCAGAGGCAACAGAGACGGTGGCTTCACTGTATTGGCCAAGTACATTGGCGCCATCGGCGAGCCACAGAACATCAAGTCCGAGAAAGTGGCCATGACGGCGCCGGTGATCACCAAATCGGAGAAGATTTCGATGACAGCTCCGGTGGTAACGGCTGGCGGCGGCGGCAGCGAGGGGAAGCCAGTGACGATGCAGTTTGTGCTGCCGAGCAAGTACAAGAAGGCAGAGGAAGCTCCAAAGCCGGCTGATGAAAGTGTTGTGATAAGGGAAGAAGGGGAGAGGAAACTCGCCGTCGTGAGATTCAGTGGAATTGCGACGGAGGGAGTGGTGGCGCAGAAGGTGGAGAATCTGAAGAAAAGCTTGGAGAAAGATGGGTATAAAGTGATTGGGGATTTTGTGTTGGCTAGATATAACCCACCATGGACATTGCCTTCTTTGAGAACCAATGAAGTCATGATACCAGTAGAATGA

Protein sequence

MVSEPIKPKRAPQFFQPPQLANPLPFTPNPYPTLPQPLNVKLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFLDEHQSQPNPEFTTWERYNRFIMCWIYSYLSEEKMGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHRIRKDGLTVSQYLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCPALEDVRSLLLAYEARLEKQNSVDQLNLAQANFATLNLNNTGRCTPSRASSNNIIRPPFNPFSAFPTSNNNVSSSILGKPQSQPLQKWPQKSNPNRPQCQICGKFGHTALICHHRTNLAYHTAPPQALLSSSNVHLPSPDSISTFSTDSYHPDENWFLDSGATHHMTPDATSLTHSIPYVGGEHVTVGDGKNISISLIGSQYLHSFSSKPIYLDSVLYTPAITKKLLSVARLCKDNQAFVEFYSSFFLVKDLRTKQIMLKGILEDGLYRLSAVSASPVQPPSSAALSSPSVFLASVKAQHWHLRLGTSSCFNFGPSFVFVSFVFCKVVVDEQKPQTPSQTTATYSMAELPNCKSNPLLQATAFLLNITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQNIKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADESVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLPSLRTNEVMIPVE

Homology

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BLAST of Lag0027216 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 493.4 bits (1269), Expect = 3.5e-135
Identity = 251/396 (63.38%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 8   PKRAPQFFQPPQLANPLPFTPNPYPTLPQPLNVKLNDTNFLLWKNQLLNAVLANGLHGFL 67
           P   P F   P    P PF+ NP+PTLPQPLNVKLND NFLLWKNQLLNAV+ANGL G+L
Sbjct: 4   PPPTPNFLAQP----PNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYL 63

Query: 68  DGSVPAPPKFLDEHQSQPNPEFTTWERYNRFIMCWIYSYLSEEKMGEIVSLNTASEIWSS 127
           DG++  PP+FLD HQ QPNP +  WERYNR +MCWIYS LSEEKMGE+VSL T  +IWSS
Sbjct: 64  DGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSS 123

Query: 128 LTRAYDSKTTARIMGLKTQLHRIRKDGLTVSQYLSQIKDIADKFSAIGEPISYRDHLAHI 187
           LTR YDSKTTARIMGLKT+L  +RKDG +VSQYL++IK+IADKF+A+GEP+SYRDHLAH+
Sbjct: 124 LTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHV 183

Query: 188 LDGLGSEYNAFVTSIQNRSDCPALEDVRSLLLAYEARLEKQNSVDQLNLAQANFATLNLN 247
           LDGLGSEYNAFVTSI NR+D P+LEDVRSLLLAYEARL+KQN+VDQLN+AQAN   L+L 
Sbjct: 184 LDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQ 243

Query: 248 NTGRCTPSRASSNNIIRPPF--NPFSAFPTSNNNVSSSILGKPQSQPLQKWPQKSNPNRP 307
           +  +  P + S  N  +  F  +P SA        S SILGKPQS  + KWP K + ++ 
Sbjct: 244 HNSKRPPPKFSFPNHYKHSFPNSPISAAQ------SQSILGKPQS--VHKWPPKPSSSKI 303

Query: 308 QCQICGKFGHTALICHHRTNLAYHTAPPQALLSSSNVHLPSPDSISTFSTDSYHPDENWF 367
           QCQICGK GH+A +C+HRTN+AYH A PQAL        PSP   S+   +  HPDE+WF
Sbjct: 304 QCQICGKLGHSAAVCYHRTNIAYHNASPQALYHHVQ---PSPTHPSS-GHEFQHPDESWF 363

Query: 368 LDSGATHHMTPDATSLTHSIPYVGGEHVTVGDGKNI 402
           +DSGATHHMTPD++ L +  PY GGE VTVG+G ++
Sbjct: 364 MDSGATHHMTPDSSILCNPTPYSGGEQVTVGNGSSV 383

[Close]

BLAST of Lag0027216 vs. NCBI nr
Match: RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])

HSP 1 Score: 365.2 bits (936), Expect = 1.4e-96
Identity = 220/505 (43.56%), Postives = 290/505 (57.43%), Query Frame = 0


Query: 30  PYPTLPQPLNVKLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFLDEHQSQPNPEF 89
           P P+L Q L++KL++TN LL K+QLLN ++ANGL  F+D    +PPK+LD    Q NPEF
Sbjct: 32  PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91

Query: 90  TTWERYNRFIMCWIYSYLSEEKMGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHR 149
             W+R N+ +M WIYS L+   +G+IV  +TA +IW+SL   Y+S + A +M L +QL R
Sbjct: 92  VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151

Query: 150 IRKDGLTVSQYLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCP 209
           I+K  + +S+YLS++K + D+F+ IGEP+SYRD L  IL+GL  EY+ FVTSI NRSD P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211

Query: 210 ALEDVRSLLLAYEARLEKQNSVDQLNLAQANFATLNLNNTGRCTPSRASSNNIIRPPFNP 269
           +L++V SLL  YE RL +++    LN  QAN             P +   NN I      
Sbjct: 212 SLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN-------------PRQPGYNNSI------ 271

Query: 270 FSAFPTSNNNVSSSILGKPQSQPLQKWPQKSNPNRPQCQICGKFGHTALICHHRTNLAYH 329
                                              PQCQICGK GH AL  +HRTNL YH
Sbjct: 272 -----------------------------------PQCQICGKSGHIALNGYHRTNLTYH 331

Query: 330 TAP-PQALLSSSNVHLPSPDSISTFSTDSYHP--------DENWFLDSGATHHMTPDATS 389
               P A   + N    +   IS   T S  P        D +W++DSGATHH TP+   
Sbjct: 332 PPVFPNAAAFNPNGPGQTSSPISAMLTTSAAPTGLSSQSSDNSWYMDSGATHHFTPEFGH 391

Query: 390 LTHSIPYVGGEHVTVGDGKNISISLIGSQYLHSFSSKPIYLDSVLYTPAITKKLLSVARL 449
           +T ++ Y  G+H  VG+ K I IS IG   LHS S KPI+L+ VL+TP I+K+L+SV RL
Sbjct: 392 MTDAMQYSSGDHALVGNDKQIGISHIGHALLHS-SVKPIHLNHVLHTPEISKQLISVTRL 451

Query: 450 CKDNQAFVEFYSSFFLVKDLRTKQIMLKGILEDGLYRLSAVSASPVQPPSSAALSSPSV- 509
             DN+AFVEFY +FFLVKD +TKQ++L+G LE GLY+L    A P    SS+  SSPS  
Sbjct: 452 GADNKAFVEFYPTFFLVKDQQTKQLLLQGHLERGLYKL----AQPTTLTSSSVSSSPSTQ 477

Query: 510 FLASVKAQH----------WHLRLG 515
           F  +  AQ           WH RLG
Sbjct: 512 FFPAPPAQAFLSQQNQVVLWHNRLG 477

[Close]

BLAST of Lag0027216 vs. NCBI nr
Match: XP_016899693.1 (PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Cucumis melo] >KAA0044140.1 heme-binding-like protein [Cucumis melo var. makuwa] >TYK24997.1 heme-binding-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 353.2 bits (905), Expect = 5.6e-93
Identity = 180/192 (93.75%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST+DYEIRKYEPSVVAEV YDPTQFRGN+DGGFTVLAKYIGAIGEPQN
Sbjct: 8   ISVETPKYELIQSTSDYEIRKYEPSVVAEVAYDPTQFRGNKDGGFTVLAKYIGAIGEPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKISMTAPVVT GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE
Sbjct: 68  IKSEKVAMTAPVITKSEKISMTAPVVT-GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
            VVI+EEGERKLAVVRFSGIATEGVVA+KVE LKKSLEKDG+KVIGD+VLARYNPPWTLP
Sbjct: 128 RVVIKEEGERKLAVVRFSGIATEGVVAEKVEQLKKSLEKDGHKVIGDYVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPVE 767
           SLRTNEVMIPVE
Sbjct: 188 SLRTNEVMIPVE 198

[Close]

BLAST of Lag0027216 vs. NCBI nr
Match: XP_038906231.1 (heme-binding-like protein At3g10130, chloroplastic [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 1.2e-92
Identity = 179/192 (93.23%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST DYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIG+PQN
Sbjct: 8   ISVETPKYELIQSTADYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGQPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKI MTAPVVT GGGG EGKP+TMQFVLPSKYKKAEEAPKP DE
Sbjct: 68  IKSEKVAMTAPVITKSEKIPMTAPVVT-GGGGGEGKPMTMQFVLPSKYKKAEEAPKPVDE 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
           +VVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDG+K+IGD+VLARYNPPWTLP
Sbjct: 128 NVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGHKMIGDYVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPVE 767
           SLRTNEVMIPVE
Sbjct: 188 SLRTNEVMIPVE 198

[Close]

BLAST of Lag0027216 vs. NCBI nr
Match: KAG7017250.1 (Heme-binding-like protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.1 bits (902), Expect = 1.2e-92
Identity = 181/191 (94.76%), Postives = 186/191 (97.38%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST DYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN
Sbjct: 8   ISVETPKYELIQSTADYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKISMTAPVVT GGGG EGKPVTMQFVLPSKYKKAEEAPKPAD 
Sbjct: 68  IKSEKVAMTAPVITKSEKISMTAPVVT-GGGGGEGKPVTMQFVLPSKYKKAEEAPKPADG 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
           SV IREEGERK+AVVRFSGIATEGVVAQKVENLKKSLEKDG+KVIGDFVLARYNPPWTLP
Sbjct: 128 SVSIREEGERKVAVVRFSGIATEGVVAQKVENLKKSLEKDGFKVIGDFVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPV 766
           SLRTNEVMIP+
Sbjct: 188 SLRTNEVMIPL 197

[Close]

BLAST of Lag0027216 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-53
Identity = 165/539 (30.61%), Postives = 248/539 (46.01%), Query Frame = 0


Query: 41  KLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFL-DEHQSQPNPEFTTWERYNRFI 100
           KL  TN+L+W  Q+        L GFLDGS   PP  +  +   + NP++T W+R ++ I
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 101 MCWIYSYLSEEKMGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHRIRKDGLTVSQ 160
              +   +S      +    TA++IW +L + Y + +   +  L+TQL +  K   T+  
Sbjct: 85  YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 161 YLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCPALEDVRSLLL 220
           Y+  +    D+ + +G+P+ + + +  +L+ L  EY   +  I  +   P L ++   LL
Sbjct: 145 YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 221 AYEARLEKQNSVDQLNL-----AQANFATLNLNNTGRCTPSRASSNNIIRPPFNPFSAFP 280
            +E+++   +S   + +     +  N  T N NN G                 N  + + 
Sbjct: 205 NHESKILAVSSATVIPITANAVSHRNTTTTNNNNNG-----------------NRNNRYD 264

Query: 281 TSNNNVSSSILGKPQSQPLQKWPQKSNPNRP---QCQICGKFGHTALICHHRTNLAYHTA 340
             NNN +S    KP  Q    +   +N ++P   +CQICG  GH+A  C          +
Sbjct: 265 NRNNNNNS----KPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRC----------S 324

Query: 341 PPQALLSSSNVHL-PSP----DSISTFSTDSYHPDENWFLDSGATHHMTPDATSLTHSIP 400
             Q  LSS N    PSP       +  +  S +   NW LDSGATHH+T D  +L+   P
Sbjct: 325 QLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQP 384

Query: 401 YVGGEHVTVGDGKNISISLIGSQYLHSFSSKPIYLDSVLYTPAITKKLLSVARLCKDNQA 460
           Y GG+ V V DG  I IS  GS  L S  S+P+ L ++LY P I K L+SV RLC  N  
Sbjct: 385 YTGGDDVMVADGSTIPISHTGSTSL-STKSRPLNLHNILYVPNIHKNLISVYRLCNANGV 444

Query: 461 FVEFYSSFFLVKDLRTKQIMLKGILEDGLYRLSAVSASPVQPPSSAALSSPSVFLASVKA 520
            VEF+ + F VKDL T   +L+G  +D LY     S+ PV     +  +SP     S KA
Sbjct: 445 SVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQPV-----SLFASP-----SSKA 504

Query: 521 QH--WHLRLG--TSSCFN----------FGPSFVFVSFVFCKVVVDEQKPQTPSQTTAT 552
            H  WH RLG    S  N            PS  F+S   C +    + P + S   +T
Sbjct: 505 THSSWHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINST 521

[Close]

BLAST of Lag0027216 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.2e-47
Identity = 147/486 (30.25%), Postives = 223/486 (45.88%), Query Frame = 0


Query: 41  KLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFL-DEHQSQPNPEFTTWERYNRFI 100
           KL  TN+L+W  Q+        L GFLDGS P PP  +  +   + NP++T W R ++ I
Sbjct: 25  KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 101 MCWIYSYLSEEKMGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHRIRKDGLTVSQ 160
              I   +S      +    TA++IW +L + Y + +   +    TQL  I +       
Sbjct: 85  YSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHV----TQLRFITR------- 144

Query: 161 YLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCPALEDVRSLLL 220
                    D+ + +G+P+ + + +  +L+ L  +Y   +  I  +   P+L ++   L+
Sbjct: 145 --------FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLI 204

Query: 221 AYEARLEKQNSVDQLNLAQANFATLNLNNTGRCTPSRASSNNIIRPPFNPFSAFPTSNNN 280
             E++L   NS + + +  AN  T    NT R   +R  + N               NNN
Sbjct: 205 NRESKLLALNSAEVVPIT-ANVVTHRNTNTNRNQNNRGDNRNY--------------NNN 264

Query: 281 VSSSILGKPQSQPLQKWPQKSNPNRPQCQICGKFGHTALIC------HHRTNLAYHTAPP 340
            + S   +P S   +   ++  P   +CQIC   GH+A  C         TN    T+P 
Sbjct: 265 NNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPF 324

Query: 341 QALLSSSNVHLPSPDSISTFSTDSYHPDENWFLDSGATHHMTPDATSLTHSIPYVGGEHV 400
                 +N+ + SP           +   NW LDSGATHH+T D  +L+   PY GG+ V
Sbjct: 325 TPWQPRANLAVNSP-----------YNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDV 384

Query: 401 TVGDGKNISISLIGSQYLHSFSSKPIYLDSVLYTPAITKKLLSVARLCKDNQAFVEFYSS 460
            + DG  I I+  GS  L + SS+ + L+ VLY P I K L+SV RLC  N+  VEF+ +
Sbjct: 385 MIADGSTIPITHTGSASLPT-SSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPA 444

Query: 461 FFLVKDLRTKQIMLKGILEDGLYRLSAVSASPVQPPSSAALSSPSVFLASVKAQH--WHL 518
            F VKDL T   +L+G  +D LY     S+  V     +  +SP       KA H  WH 
Sbjct: 445 SFQVKDLNTGVPLLQGKTKDELYEWPIASSQAV-----SMFASP-----CSKATHSSWHS 454

[Close]

BLAST of Lag0027216 vs. ExPASy Swiss-Prot
Match: Q9SR77 (Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g10130 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-21
Identity = 77/208 (37.02%), Postives = 114/208 (54.81%), Query Frame = 0


Query: 570 AFLLNITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDG---GFTVLAKYI 629
           AF+    +ET  F ++  T+ YEIR+ EP  VAE T  P +   +  G    F VLA+Y+
Sbjct: 107 AFMSVPDLETMNFRVLFRTDKYEIRQVEPYFVAE-TIMPGETGFDSYGASKSFNVLAEYL 166

Query: 630 GAIGEPQNIKSEKVAMTAPVITK-----SEKISMTAPVVTAGGGGSEGKPVTMQFVLPSK 689
                 +N   EK+ MT PV+T+      EK+ MT PV+T+     +     M FV+PSK
Sbjct: 167 FG----KNTIKEKMEMTTPVVTRKVQSVGEKMEMTTPVITS--KAKDQNQWRMSFVMPSK 226

Query: 690 YKKAEEAPKPADESVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGD 749
           Y      P P D SV I++   + +AVV FSG  T+  + ++   L+++L+ D    + D
Sbjct: 227 Y--GSNLPLPKDPSVKIQQVPRKIVAVVAFSGYVTDEEIERRERELRRALQNDKKFRVRD 286

Query: 750 ---FVLARYNPPWTLPSLRTNEVMIPVE 767
              F +A+YNPP+TLP +R NEV + VE
Sbjct: 287 GVSFEVAQYNPPFTLPFMRRNEVSLEVE 305

[Close]

BLAST of Lag0027216 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 1.7e-135
Identity = 251/396 (63.38%), Postives = 301/396 (76.01%), Query Frame = 0


Query: 8   PKRAPQFFQPPQLANPLPFTPNPYPTLPQPLNVKLNDTNFLLWKNQLLNAVLANGLHGFL 67
           P   P F   P    P PF+ NP+PTLPQPLNVKLND NFLLWKNQLLNAV+ANGL G+L
Sbjct: 4   PPPTPNFLAQP----PNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYL 63

Query: 68  DGSVPAPPKFLDEHQSQPNPEFTTWERYNRFIMCWIYSYLSEEKMGEIVSLNTASEIWSS 127
           DG++  PP+FLD HQ QPNP +  WERYNR +MCWIYS LSEEKMGE+VSL T  +IWSS
Sbjct: 64  DGTIMPPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSS 123

Query: 128 LTRAYDSKTTARIMGLKTQLHRIRKDGLTVSQYLSQIKDIADKFSAIGEPISYRDHLAHI 187
           LTR YDSKTTARIMGLKT+L  +RKDG +VSQYL++IK+IADKF+A+GEP+SYRDHLAH+
Sbjct: 124 LTRVYDSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHV 183

Query: 188 LDGLGSEYNAFVTSIQNRSDCPALEDVRSLLLAYEARLEKQNSVDQLNLAQANFATLNLN 247
           LDGLGSEYNAFVTSI NR+D P+LEDVRSLLLAYEARL+KQN+VDQLN+AQAN   L+L 
Sbjct: 184 LDGLGSEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQ 243

Query: 248 NTGRCTPSRASSNNIIRPPF--NPFSAFPTSNNNVSSSILGKPQSQPLQKWPQKSNPNRP 307
           +  +  P + S  N  +  F  +P SA        S SILGKPQS  + KWP K + ++ 
Sbjct: 244 HNSKRPPPKFSFPNHYKHSFPNSPISAAQ------SQSILGKPQS--VHKWPPKPSSSKI 303

Query: 308 QCQICGKFGHTALICHHRTNLAYHTAPPQALLSSSNVHLPSPDSISTFSTDSYHPDENWF 367
           QCQICGK GH+A +C+HRTN+AYH A PQAL        PSP   S+   +  HPDE+WF
Sbjct: 304 QCQICGKLGHSAAVCYHRTNIAYHNASPQALYHHVQ---PSPTHPSS-GHEFQHPDESWF 363

Query: 368 LDSGATHHMTPDATSLTHSIPYVGGEHVTVGDGKNI 402
           +DSGATHHMTPD++ L +  PY GGE VTVG+G ++
Sbjct: 364 MDSGATHHMTPDSSILCNPTPYSGGEQVTVGNGSSV 383

[Close]

BLAST of Lag0027216 vs. ExPASy TrEMBL
Match: A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-97
Identity = 220/505 (43.56%), Postives = 290/505 (57.43%), Query Frame = 0


Query: 30  PYPTLPQPLNVKLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFLDEHQSQPNPEF 89
           P P+L Q L++KL++TN LL K+QLLN ++ANGL  F+D    +PPK+LD    Q NPEF
Sbjct: 32  PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91

Query: 90  TTWERYNRFIMCWIYSYLSEEKMGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHR 149
             W+R N+ +M WIYS L+   +G+IV  +TA +IW+SL   Y+S + A +M L +QL R
Sbjct: 92  VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151

Query: 150 IRKDGLTVSQYLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCP 209
           I+K  + +S+YLS++K + D+F+ IGEP+SYRD L  IL+GL  EY+ FVTSI NRSD P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211

Query: 210 ALEDVRSLLLAYEARLEKQNSVDQLNLAQANFATLNLNNTGRCTPSRASSNNIIRPPFNP 269
           +L++V SLL  YE RL +++    LN  QAN             P +   NN I      
Sbjct: 212 SLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN-------------PRQPGYNNSI------ 271

Query: 270 FSAFPTSNNNVSSSILGKPQSQPLQKWPQKSNPNRPQCQICGKFGHTALICHHRTNLAYH 329
                                              PQCQICGK GH AL  +HRTNL YH
Sbjct: 272 -----------------------------------PQCQICGKSGHIALNGYHRTNLTYH 331

Query: 330 TAP-PQALLSSSNVHLPSPDSISTFSTDSYHP--------DENWFLDSGATHHMTPDATS 389
               P A   + N    +   IS   T S  P        D +W++DSGATHH TP+   
Sbjct: 332 PPVFPNAAAFNPNGPGQTSSPISAMLTTSAAPTGLSSQSSDNSWYMDSGATHHFTPEFGH 391

Query: 390 LTHSIPYVGGEHVTVGDGKNISISLIGSQYLHSFSSKPIYLDSVLYTPAITKKLLSVARL 449
           +T ++ Y  G+H  VG+ K I IS IG   LHS S KPI+L+ VL+TP I+K+L+SV RL
Sbjct: 392 MTDAMQYSSGDHALVGNDKQIGISHIGHALLHS-SVKPIHLNHVLHTPEISKQLISVTRL 451

Query: 450 CKDNQAFVEFYSSFFLVKDLRTKQIMLKGILEDGLYRLSAVSASPVQPPSSAALSSPSV- 509
             DN+AFVEFY +FFLVKD +TKQ++L+G LE GLY+L    A P    SS+  SSPS  
Sbjct: 452 GADNKAFVEFYPTFFLVKDQQTKQLLLQGHLERGLYKL----AQPTTLTSSSVSSSPSTQ 477

Query: 510 FLASVKAQH----------WHLRLG 515
           F  +  AQ           WH RLG
Sbjct: 512 FFPAPPAQAFLSQQNQVVLWHNRLG 477

[Close]

BLAST of Lag0027216 vs. ExPASy TrEMBL
Match: A0A5A7TLQ2 (Heme-binding-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001150 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.7e-93
Identity = 180/192 (93.75%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST+DYEIRKYEPSVVAEV YDPTQFRGN+DGGFTVLAKYIGAIGEPQN
Sbjct: 8   ISVETPKYELIQSTSDYEIRKYEPSVVAEVAYDPTQFRGNKDGGFTVLAKYIGAIGEPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKISMTAPVVT GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE
Sbjct: 68  IKSEKVAMTAPVITKSEKISMTAPVVT-GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
            VVI+EEGERKLAVVRFSGIATEGVVA+KVE LKKSLEKDG+KVIGD+VLARYNPPWTLP
Sbjct: 128 RVVIKEEGERKLAVVRFSGIATEGVVAEKVEQLKKSLEKDGHKVIGDYVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPVE 767
           SLRTNEVMIPVE
Sbjct: 188 SLRTNEVMIPVE 198

[Close]

BLAST of Lag0027216 vs. ExPASy TrEMBL
Match: A0A1S4DUQ0 (heme-binding-like protein At3g10130, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107990617 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 2.7e-93
Identity = 180/192 (93.75%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST+DYEIRKYEPSVVAEV YDPTQFRGN+DGGFTVLAKYIGAIGEPQN
Sbjct: 8   ISVETPKYELIQSTSDYEIRKYEPSVVAEVAYDPTQFRGNKDGGFTVLAKYIGAIGEPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKISMTAPVVT GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE
Sbjct: 68  IKSEKVAMTAPVITKSEKISMTAPVVT-GGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
            VVI+EEGERKLAVVRFSGIATEGVVA+KVE LKKSLEKDG+KVIGD+VLARYNPPWTLP
Sbjct: 128 RVVIKEEGERKLAVVRFSGIATEGVVAEKVEQLKKSLEKDGHKVIGDYVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPVE 767
           SLRTNEVMIPVE
Sbjct: 188 SLRTNEVMIPVE 198

[Close]

BLAST of Lag0027216 vs. ExPASy TrEMBL
Match: A0A6J1F979 (heme-binding-like protein At3g10130, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441968 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 7.9e-93
Identity = 182/192 (94.79%), Postives = 185/192 (96.35%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I+VETPK+ELIQST DYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN
Sbjct: 8   ISVETPKYELIQSTADYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 67

Query: 635 IKSEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADE 694
           IKSEKVAMTAPVITKSEKISMTAPVVT GGGG EGKPVTMQFVLPSKYKKAEEAPKPAD 
Sbjct: 68  IKSEKVAMTAPVITKSEKISMTAPVVT-GGGGGEGKPVTMQFVLPSKYKKAEEAPKPADG 127

Query: 695 SVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPWTLP 754
           SV IREEGERK+AVVRFSGIATEGVVAQKVE LKKSLEKDG KVIGDFVLARYNPPWTLP
Sbjct: 128 SVSIREEGERKVAVVRFSGIATEGVVAQKVEKLKKSLEKDGIKVIGDFVLARYNPPWTLP 187

Query: 755 SLRTNEVMIPVE 767
           SLRTNEVMIPVE
Sbjct: 188 SLRTNEVMIPVE 198

[Close]

BLAST of Lag0027216 vs. TAIR 10
Match: AT2G37970.1 (SOUL heme-binding family protein )

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-67
Identity = 131/208 (62.98%), Postives = 158/208 (75.96%), Query Frame = 0


Query: 575 ITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQN 634
           I VETPK+ + +S + YEIR+Y P+V AEVTYD ++F+G++DGGF +LAKYIG  G+P+N
Sbjct: 18  IAVETPKYTVTKSGDGYEIREYPPAVAAEVTYDASEFKGDKDGGFQLLAKYIGVFGKPEN 77

Query: 635 IKSEKVAMTAPVITK---------------SEKISMTAPVVT-AGGGGSEGKPVTMQFVL 694
            K EK+AMTAPVITK               SEKI MT+PVVT  GGG    K VTMQF+L
Sbjct: 78  EKPEKIAMTAPVITKEGEKIAMTAPVITKESEKIEMTSPVVTKEGGGEGRKKLVTMQFLL 137

Query: 695 PSKYKKAEEAPKPADESVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKV 754
           PS YKKAEEAP+P DE VVI+EEG RK  V++FSGIA+E VV++KV+ L   LEKDG+K+
Sbjct: 138 PSMYKKAEEAPRPTDERVVIKEEGGRKYGVIKFSGIASESVVSEKVKKLSSHLEKDGFKI 197

Query: 755 IGDFVLARYNPPWTLPSLRTNEVMIPVE 767
            GDFVLARYNPPWTLP  RTNEVMIPVE
Sbjct: 198 TGDFVLARYNPPWTLPPFRTNEVMIPVE 225

[Close]

BLAST of Lag0027216 vs. TAIR 10
Match: AT3G10130.1 (SOUL heme-binding family protein )

HSP 1 Score: 106.3 bits (264), Expect = 1.1e-22
Identity = 77/208 (37.02%), Postives = 114/208 (54.81%), Query Frame = 0


Query: 570 AFLLNITVETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDG---GFTVLAKYI 629
           AF+    +ET  F ++  T+ YEIR+ EP  VAE T  P +   +  G    F VLA+Y+
Sbjct: 107 AFMSVPDLETMNFRVLFRTDKYEIRQVEPYFVAE-TIMPGETGFDSYGASKSFNVLAEYL 166

Query: 630 GAIGEPQNIKSEKVAMTAPVITK-----SEKISMTAPVVTAGGGGSEGKPVTMQFVLPSK 689
                 +N   EK+ MT PV+T+      EK+ MT PV+T+     +     M FV+PSK
Sbjct: 167 FG----KNTIKEKMEMTTPVVTRKVQSVGEKMEMTTPVITS--KAKDQNQWRMSFVMPSK 226

Query: 690 YKKAEEAPKPADESVVIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGD 749
           Y      P P D SV I++   + +AVV FSG  T+  + ++   L+++L+ D    + D
Sbjct: 227 Y--GSNLPLPKDPSVKIQQVPRKIVAVVAFSGYVTDEEIERRERELRRALQNDKKFRVRD 286

Query: 750 ---FVLARYNPPWTLPSLRTNEVMIPVE 767
              F +A+YNPP+TLP +R NEV + VE
Sbjct: 287 GVSFEVAQYNPPFTLPFMRRNEVSLEVE 305

[Close]

BLAST of Lag0027216 vs. TAIR 10
Match: AT5G20140.1 (SOUL heme-binding family protein )

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-17
Identity = 65/191 (34.03%), Postives = 98/191 (51.31%), Query Frame = 0


Query: 577 VETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQNIK 636
           +ETPK+++++ T +YE+R YEP +V E   D    + +   GF  +A YI      +N  
Sbjct: 205 LETPKYQILKRTANYEVRNYEPFIVVETIGD----KLSGSSGFNNVAGYIFG----KNST 264

Query: 637 SEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADESV 696
            EK+ MT PV T++    +++              V++Q V+PS  K     P P +E V
Sbjct: 265 MEKIPMTTPVFTQTTDTQLSS-------------DVSVQIVIPSG-KDLSSLPMPNEEKV 324

Query: 697 VIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPPW-TLPS 756
            +++      A V+FSG  TE VV  K   L+ SL KDG +     +LARYN P  T   
Sbjct: 325 NLKKLEGGFAAAVKFSGKPTEDVVQAKENELRSSLSKDGLRAKKGCMLARYNDPGRTWNF 373

Query: 757 LRTNEVMIPVE 767
           +  NEV+I +E
Sbjct: 385 IMRNEVIIWLE 373

[Close]

BLAST of Lag0027216 vs. TAIR 10
Match: AT5G20140.2 (SOUL heme-binding family protein )

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-16
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 0


Query: 577 VETPKFELIQSTNDYEIRKYEPSVVAEVTYDPTQFRGNRDGGFTVLAKYIGAIGEPQNIK 636
           +ETPK+++++ T +YE+R YEP +V E   D    + +   GF  +A YI      +N  
Sbjct: 205 LETPKYQILKRTANYEVRNYEPFIVVETIGD----KLSGSSGFNNVAGYIFG----KNST 264

Query: 637 SEKVAMTAPVITKSEKISMTAPVVTAGGGGSEGKPVTMQFVLPSKYKKAEEAPKPADESV 696
            EK+ MT PV T++    +++              V++Q V+PS  K     P P +E V
Sbjct: 265 MEKIPMTTPVFTQTTDTQLSS-------------DVSVQIVIPSG-KDLSSLPMPNEEKV 324

Query: 697 VIREEGERKLAVVRFSGIATEGVVAQKVENLKKSLEKDGYKVIGDFVLARYNPP 751
            +++      A V+FSG  TE VV  K   L+ SL KDG +     +LARYN P
Sbjct: 325 NLKKLEGGFAAAVKFSGKPTEDVVQAKENELRSSLSKDGLRAKKGCMLARYNDP 356

[Close]

BLAST of Lag0027216 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 4.4e-11
Identity = 52/258 (20.16%), Postives = 117/258 (45.35%), Query Frame = 0


Query: 37  PLNVKLNDTNFLLWKNQLLNAVLANGLHGFLDGSVPAPPKFLDEHQSQPNPEFTTWERYN 96
           P+ + + ++N+  W+   L   L+  + G +DG++              N     W++ +
Sbjct: 21  PVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTL-----------LPTNANDVNWQKRD 80

Query: 97  RFIMCWIYSYLSEEK-MGEIVSLNTASEIWSSLTRAYDSKTTARIMGLKTQLHRIRKDGL 156
             +   +Y  L+ ++  G  V+ +T+ +IW  +   + +   AR + L ++L       +
Sbjct: 81  GIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDM 140

Query: 157 TVSQYLSQIKDIADKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNRSDCPALEDVR 216
            V+ Y  ++K +AD    +  P++ R+ + ++L+GL  +++  +  I++R   P+ +D  
Sbjct: 141 RVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAA 200

Query: 217 SLLLAYEARLEKQNSVDQLNLAQANFATL----------NLNNTG---RCTPSRASSNNI 276
           ++L   E RL++    +  ++  ++ +T+          N   +G        R   NNI
Sbjct: 201 TMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGRGRGNNI 260

Query: 277 IRPPFNPFSAF--PTSNN 279
            R     FS +  PT N+
Sbjct: 261 FRGRGGRFSYYNMPTFNS 267

The following BLAST results are available for this feature:

BLAST of Lag0027216 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155181.1	3.5e-135	63.38	uncharacterized protein LOC111022315 [Momordica charantia]	[more]
RVW69807.1	1.4e-96	43.56	Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]	[more]
XP_016899693.1	5.6e-93	93.75	PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Cucumis melo] >KA...	[more]
XP_038906231.1	1.2e-92	93.23	heme-binding-like protein At3g10130, chloroplastic [Benincasa hispida]	[more]
KAG7017250.1	1.2e-92	94.76	Heme-binding-like protein, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Lag0027216 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.5e-53	30.61	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.2e-47	30.25	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q9SR77	1.6e-21	37.02	Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Lag0027216 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQX7	1.7e-135	63.38	uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A438GC62	6.9e-97	43.56	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A5A7TLQ2	2.7e-93	93.75	Heme-binding-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S4DUQ0	2.7e-93	93.75	heme-binding-like protein At3g10130, chloroplastic OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1F979	7.9e-93	94.79	heme-binding-like protein At3g10130, chloroplastic OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lag0027216 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37970.1	1.5e-67	62.98	SOUL heme-binding family protein	[more]
AT3G10130.1	1.1e-22	37.02	SOUL heme-binding family protein	[more]
AT5G20140.1	1.8e-17	34.03	SOUL heme-binding family protein	[more]
AT5G20140.2	2.0e-16	33.91	SOUL heme-binding family protein	[more]
AT1G34070.1	4.4e-11	20.16	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 94..227 e-value: 7.2E-23 score: 80.9
None	No IPR available	PANTHER	PTHR11220:SF67	SUBFAMILY NOT NAMED	coord: 574..766
IPR011256	Regulatory factor, effector binding domain superfamily	GENE3D	3.20.80.10	Regulatory factor, effector binding domain	coord: 576..766 e-value: 5.0E-52 score: 178.2
IPR011256	Regulatory factor, effector binding domain superfamily	SUPERFAMILY	55136	Probable bacterial effector-binding domain	coord: 569..766
IPR006917	SOUL haem-binding protein	PFAM	PF04832	SOUL	coord: 577..764 e-value: 8.3E-53 score: 179.0
IPR006917	SOUL haem-binding protein	PANTHER	PTHR11220	HEME-BINDING PROTEIN-RELATED	coord: 574..766

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027216.1	Lag0027216.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0005488	binding