Lag0027208 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027208
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Nuclear transport factor 2 (NTF2) family protein
Location	chr10: 45864696 .. 45865911 (-)
RNA-Seq Expression	Lag0027208
Synteny	Lag0027208

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTCCATACATCTAATCTATGCTGCAATGTGAGTACTGCTTCTCTTAGTTGATTTTCTCATACCGTTAATATCAATTGATTTTGTTCTTCTCTTTCTACCTTTTATCATTATTGCTATTTCAAGTGCATTTGTTGCTGTAATTGATTTATATGCGTTCTTCATTGTAGTGAAGTGTCTCTGGGTTTAATTCTTCTTTTATAAGCTTCATCTGGAATCTGGACGTCAATTTTGAAATAGTTCAGTGATATTGTGATTTTCTAGGGTTATGTTACATTTATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATATTCCTTCAGCTGTCCCTAAGCAATTTGATATTGGCTTGGTTAAAGCGTCCGGAGGGGGATATGGAAATTTCAGTAAGTTTCCTTGAGTTTTTACCATTTCCAGGAGCTCTAATCTACTCCTCTATCTACTGCTTTTGAAGTTTGTTTTAGCTTTCATTACCTTTGTGAAATCTGAACTTTCGAGTCAGTACAATGTAGATATCTTATATAAAGATGGATAGACTGATATAGATATACACAGGGTTCTGTATAATTGAACTTTGGATCTTGCTCCAATTTCTTCAGTAAATCAGCATTTTGTTAATATCTAGTGCAGGGCCCTGTAAACAAACTTCCAGGATGCTATCATTCCAACCTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAGAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACATTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACATTCAAGTTCATGCCAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAG

mRNA sequence

ATGGCGCTCCATACATCTAATCTATGCTGCAATGGTTATGTTACATTTATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATATTCCTTCAGCTGTCCCTAAGCAATTTGATATTGGCTTGGTTAAAGCGTCCGGAGGGGGATATGGAAATTTCAGGCCCTGTAAACAAACTTCCAGGATGCTATCATTCCAACCTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAGAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACATTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACATTCAAGTTCATGCCAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAG

Coding sequence (CDS)

ATGGCGCTCCATACATCTAATCTATGCTGCAATGGTTATGTTACATTTATTGGCAATCGGAAGAGTGTACGTTGTTTCCAGAGTTTTGAGGTGTTTCGTCATATTCCTTCAGCTGTCCCTAAGCAATTTGATATTGGCTTGGTTAAAGCGTCCGGAGGGGGATATGGAAATTTCAGGCCCTGTAAACAAACTTCCAGGATGCTATCATTCCAACCTTGCCGACTGAAAGCTGAGAACTCGAGCGGTGAAAGCGTTACACTTGATGCAGAAACTTTGGAGCAGGACCTGCAAAATGCCATTGCAGATGAAGATTACGCCAGAGCTGCACAAATCAGAGATACCTTGAAAGCTCTTCAAGAGGATAGCAAAACTTCAGTATTGGCAGCCAATGCTAAGTTTTACGAAGCGTTTCGGACTGGGGATCTTGCTGCAATGCAAACTCTTTGGGCACGAGGAGATAGTGTCTGCTGCGTGCACCCGGGCATGAGGGGGATATCGGGGTACGACGACATTATGACCAGCTGGGAGTATGTATGGGCGAACTATGAGTTCCCACTGGAGATTCAACTCAAGGACATTCAAGTTCATGCCAGAGGGGAAGTTGGCTATGTTACATGTGTGGAATTGGTGAAGACGAAAGGTAGCAGTTGGGGGGGACAGTTTGTTACCAACGTGTTTGAGAGAATTAATGGTCAATGGTTCATCTGTATTCACCATGCCTCACCTATAGATTTGTAG

Protein sequence

MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGYGNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHASPIDL

Homology

[Close]

BLAST of Lag0027208 vs. NCBI nr
Match: XP_022941815.1 (uncharacterized protein LOC111447066 [Cucurbita moschata])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 219/260 (84.23%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCCNGYVTFI NRKSVRC QS EVF H+PSA+PKQ+DIGLVKAS GGY     
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFYHVPSALPKQYDIGLVKASIGGYGFVSP 67

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ+SRMLSF+PC+LKAENSSGES+TLDAE L+QDLQNAIADEDY
Sbjct: 68  SIPRCLGSTIGNFRPCKQSSRMLSFRPCQLKAENSSGESITLDAEALKQDLQNAIADEDY 127

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+++TSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]

BLAST of Lag0027208 vs. NCBI nr
Match: KAG6596375.1 (F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458.8 bits (1179), Expect = 3.0e-125
Identity = 218/260 (83.85%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCCNGYVTFI NRKSVRC QS EVF H+P A+PKQ+DIGLVKAS GGY     
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFHHVPLALPKQYDIGLVKASIGGYGFVSP 67

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ++RMLSF+PC+LKAENSSGES+TLDAETL+QDLQNAIADEDY
Sbjct: 68  SIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 127

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+++TSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]

BLAST of Lag0027208 vs. NCBI nr
Match: KAG7027924.1 (F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 217/260 (83.46%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCC+GYVTFI NRKSVRC QS EVF H+P A+PKQ+DIGLVKAS GGY     
Sbjct: 8   MALHTSSLCCHGYVTFISNRKSVRCSQSCEVFHHVPLALPKQYDIGLVKASIGGYGFVSP 67

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ++RMLSF+PC+LKAENSSGES+TLDAETL+QDLQNAIADEDY
Sbjct: 68  SIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 127

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+++TSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]

BLAST of Lag0027208 vs. NCBI nr
Match: XP_022971333.1 (uncharacterized protein LOC111470086 [Cucurbita maxima])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 216/260 (83.08%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCCNGYVTFI NRK+VRC QS EVF H+PSA+PKQ+DIG VK S GGY     
Sbjct: 1   MALHTSSLCCNGYVTFISNRKNVRCSQSCEVFHHVPSALPKQYDIGFVKESTGGYGFLFP 60

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ++RMLSF+PC+LKAENSSGES+TLDAETL+QDLQNAIADEDY
Sbjct: 61  SIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 120

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 180

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
            GYD++MTSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 LGYDNVMTSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]

BLAST of Lag0027208 vs. NCBI nr
Match: XP_023539336.1 (uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.5 bits (1168), Expect = 5.7e-124
Identity = 217/260 (83.46%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGG------ 60
           MALHTS+LCCNGYVTFI NRKSVRC QS EVF H+PSA PKQ+DIGLVKAS GG      
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFHHVPSARPKQYDIGLVKASTGGCGFLFP 67

Query: 61  ---------YGNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCK ++RMLSF+PC+LKAENSSGES+TLDAETL+QDLQNAIADEDY
Sbjct: 68  SIPRCLGSTIGNFRPCKLSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 127

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+++TSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]

BLAST of Lag0027208 vs. ExPASy Swiss-Prot
Match: Q93YV9 (F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.1e-12
Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 125 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEF 184
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++++ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 185 PLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 242
             + Q+  ++     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]

BLAST of Lag0027208 vs. ExPASy TrEMBL
Match: A0A6J1FUV2 (uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC111447066 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.6e-126
Identity = 219/260 (84.23%), Postives = 236/260 (90.77%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCCNGYVTFI NRKSVRC QS EVF H+PSA+PKQ+DIGLVKAS GGY     
Sbjct: 8   MALHTSSLCCNGYVTFISNRKSVRCSQSCEVFYHVPSALPKQYDIGLVKASIGGYGFVSP 67

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ+SRMLSF+PC+LKAENSSGES+TLDAE L+QDLQNAIADEDY
Sbjct: 68  SIPRCLGSTIGNFRPCKQSSRMLSFRPCQLKAENSSGESITLDAEALKQDLQNAIADEDY 127

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 128 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 187

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYD+++TSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 188 SGYDNVITSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 247

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 248 FERINGQWFICIHHASPIDL 267

[Close]

BLAST of Lag0027208 vs. ExPASy TrEMBL
Match: A0A6J1I6J4 (uncharacterized protein LOC111470086 OS=Cucurbita maxima OX=3661 GN=LOC111470086 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.3e-125
Identity = 216/260 (83.08%), Postives = 234/260 (90.00%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MALHTS+LCCNGYVTFI NRK+VRC QS EVF H+PSA+PKQ+DIG VK S GGY     
Sbjct: 1   MALHTSSLCCNGYVTFISNRKNVRCSQSCEVFHHVPSALPKQYDIGFVKESTGGYGFLFP 60

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ++RMLSF+PC+LKAENSSGES+TLDAETL+QDLQNAIADEDY
Sbjct: 61  SIPRCLGSTIGNFRPCKQSTRMLSFRPCQLKAENSSGESITLDAETLKQDLQNAIADEDY 120

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSK SV AANAKFYE+FR GDLAAMQTLWARGDSVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKASVFAANAKFYESFRNGDLAAMQTLWARGDSVCCVHPGMRGI 180

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
            GYD++MTSWEYVWANYEFPLEIQLKD++VHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 LGYDNVMTSWEYVWANYEFPLEIQLKDVEVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]

BLAST of Lag0027208 vs. ExPASy TrEMBL
Match: A0A0A0LA11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 2.6e-122
Identity = 216/260 (83.08%), Postives = 229/260 (88.08%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGG------ 60
           MALHT NLCCN YVTFI +RKSVRC QSF VF H+PSA PKQ +I LV +S GG      
Sbjct: 1   MALHTFNLCCNDYVTFISSRKSVRCSQSFSVFHHVPSAFPKQCEIRLVNSSSGGSGFLLP 60

Query: 61  ---------YGNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ SR LSF+PC+LKAENSSGES+TLDAETLEQDLQNAIADEDY
Sbjct: 61  SNFRHVGSRNGNFRPCKQASRKLSFRPCQLKAENSSGESITLDAETLEQDLQNAIADEDY 120

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDD++TSWEYVWANYEFPLEIQLKDIQVHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDIQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]

BLAST of Lag0027208 vs. ExPASy TrEMBL
Match: A0A5A7TRW4 (F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G004880 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.4e-120
Identity = 214/260 (82.31%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MAL TSNLCCN YVTFI N KSVRC QSF VF H+PSA+PKQ +I LVK+S GG      
Sbjct: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ SR LSF P +LKAENSSGES+TLDAETLEQDLQNAIA+EDY
Sbjct: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDD++TSWEYVWANYEFPLEIQLKD+QVHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]

BLAST of Lag0027208 vs. ExPASy TrEMBL
Match: A0A1S3B5S8 (uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.4e-120
Identity = 214/260 (82.31%), Postives = 228/260 (87.69%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRCFQSFEVFRHIPSAVPKQFDIGLVKASGGGY----- 60
           MAL TSNLCCN YVTFI N KSVRC QSF VF H+PSA+PKQ +I LVK+S GG      
Sbjct: 1   MALRTSNLCCNDYVTFISNWKSVRCSQSFSVFHHVPSALPKQCEIRLVKSSNGGSGFLLP 60

Query: 61  ----------GNFRPCKQTSRMLSFQPCRLKAENSSGESVTLDAETLEQDLQNAIADEDY 120
                     GNFRPCKQ SR LSF P +LKAENSSGES+TLDAETLEQDLQNAIA+EDY
Sbjct: 61  TNLRHVVSRDGNFRPCKQASRKLSFGPYQLKAENSSGESITLDAETLEQDLQNAIANEDY 120

Query: 121 ARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGI 180
           ARAA+IRDTLKALQEDSKT VL ANAKFYE+FRTGDLAAMQTLWARG+SVCCVHPGMRGI
Sbjct: 121 ARAAEIRDTLKALQEDSKTLVLTANAKFYESFRTGDLAAMQTLWARGNSVCCVHPGMRGI 180

Query: 181 SGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNV 240
           SGYDD++TSWEYVWANYEFPLEIQLKD+QVHARG+VGYVTCVELVKTKGSSWGGQFVTNV
Sbjct: 181 SGYDDVITSWEYVWANYEFPLEIQLKDMQVHARGDVGYVTCVELVKTKGSSWGGQFVTNV 240

Query: 241 FERINGQWFICIHHASPIDL 246
           FERINGQWFICIHHASPIDL
Sbjct: 241 FERINGQWFICIHHASPIDL 260

[Close]

BLAST of Lag0027208 vs. TAIR 10
Match: AT3G09250.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-70
Identity = 133/254 (52.36%), Postives = 177/254 (69.69%), Query Frame = 0


Query: 1   MALHTSNLCCNGYVTFIGNRKSVRC-FQSFEVFRHIPSAVPKQFDIGLVKAS---GGGYG 60
           MALH S + C      + N   +   F       H+P + P      +V AS   G  + 
Sbjct: 1   MALHGSGVFCK-----VSNMVEITSPFGGSMRLLHLPKSYP--IHCNMVSASNTFGSAHL 60

Query: 61  NFRPCKQTSRMLSFQPCRLKAENSSG----ESVTLDAETLEQDLQNAIADEDYARAAQIR 120
             +  +  SR+   +PCR+K E ++     ES+++D  TL+QDL+ A+ +E+Y  AA+IR
Sbjct: 61  KLQNKEPCSRL---RPCRVKREENNQTADVESISMDENTLKQDLETAVQEENYVEAAKIR 120

Query: 121 DTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIM 180
           D LK LQED+K SVL+AN++FY++FR GDLAAMQ+LW++  + CCVHPG +GI+GYD +M
Sbjct: 121 DKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKSGNPCCVHPGAKGITGYDYVM 180

Query: 181 TSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTCVELVKTKG-SSWGGQFVTNVFERING 240
            SWE VW NYEFPL I+LKD++VH RGEVGYVTC+E VKTKG SSWG QFV+NVFERI+G
Sbjct: 181 ESWELVWMNYEFPLLIELKDVEVHVRGEVGYVTCMEFVKTKGSSSWGAQFVSNVFERIDG 240

Query: 241 QWFICIHHASPIDL 246
           QWFICIHHASP+D+
Sbjct: 241 QWFICIHHASPVDI 244

[Close]

BLAST of Lag0027208 vs. TAIR 10
Match: AT3G09250.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 235.3 bits (599), Expect = 5.1e-62
Identity = 115/208 (55.29%), Postives = 154/208 (74.04%), Query Frame = 0


Query: 34  HIPSAVPKQFDIGLVKAS---GGGYGNFRPCKQTSRMLSFQPCRLKAENSSG----ESVT 93
           H+P + P      +V AS   G  +   +  +  SR+   +PCR+K E ++     ES++
Sbjct: 16  HLPKSYP--IHCNMVSASNTFGSAHLKLQNKEPCSRL---RPCRVKREENNQTADVESIS 75

Query: 94  LDAETLEQDLQNAIADEDYARAAQIRDTLKALQEDSKTSVLAANAKFYEAFRTGDLAAMQ 153
           +D  TL+QDL+ A+ +E+Y  AA+IRD LK LQED+K SVL+AN++FY++FR GDLAAMQ
Sbjct: 76  MDENTLKQDLETAVQEENYVEAAKIRDKLKELQEDNKASVLSANSRFYQSFRNGDLAAMQ 135

Query: 154 TLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEFPLEIQLKDIQVHARGEVGYVTC 213
           +LW++  + CCVHPG +GI+GYD +M SWE VW NYEFPL I+LKD++VH RGEVGYVTC
Sbjct: 136 SLWSKSGNPCCVHPGAKGITGYDYVMESWELVWMNYEFPLLIELKDVEVHVRGEVGYVTC 195

Query: 214 VELVKTKG-SSWGGQFVTNVFERINGQW 234
           +E VKTKG SSWG QFV+NVFERI+GQW
Sbjct: 196 MEFVKTKGSSSWGAQFVSNVFERIDGQW 218

[Close]

BLAST of Lag0027208 vs. TAIR 10
Match: AT4G10925.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 125 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEF 184
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++++ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 185 PLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 242
             + Q+  ++     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]

BLAST of Lag0027208 vs. TAIR 10
Match: AT4G10925.2 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 125 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEF 184
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++++ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 185 PLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 242
             + Q+  ++     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

[Close]

BLAST of Lag0027208 vs. TAIR 10
Match: AT4G10925.3 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 35/117 (29.91%), Postives = 61/117 (52.14%), Query Frame = 0


Query: 125 SVLAANAKFYEAFRTGDLAAMQTLWARGDSVCCVHPGMRGISGYDDIMTSWEYVWANYEF 184
           ++++ N +F+   R   L AM  LW   D V C+H      SGY++++ SW+  + N+E 
Sbjct: 107 AIISVNTEFFTIIRDRALQAMARLWLNSDYVKCIHASGELFSGYNEVIQSWQLCF-NWEQ 166

Query: 185 PLEIQLKDIQVHARGEVGYVTCVELVKTKGSSWGGQFVTNVFERINGQWFICIHHAS 242
             + Q+  ++     ++ +VT    +   G   G   +TNVFE  NG+W +  HH+S
Sbjct: 167 GFDFQVHTVRTRILTDMAWVTMKAYLNVDG---GPFLITNVFEFHNGRWHMVHHHSS 219

The following BLAST results are available for this feature:

BLAST of Lag0027208 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941815.1	1.8e-125	84.23	uncharacterized protein LOC111447066 [Cucurbita moschata]	[more]
KAG6596375.1	3.0e-125	83.85	F-box protein SKIP8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027924.1	1.1e-124	83.46	F-box protein SKIP8 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971333.1	1.5e-124	83.08	uncharacterized protein LOC111470086 [Cucurbita maxima]	[more]
XP_023539336.1	5.7e-124	83.46	uncharacterized protein LOC111799999 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0027208 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93YV9	6.1e-12	29.91	F-box protein SKIP8 OS=Arabidopsis thaliana OX=3702 GN=SKIP8 PE=1 SV=1	[more]

BLAST of Lag0027208 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUV2	8.6e-126	84.23	uncharacterized protein LOC111447066 OS=Cucurbita moschata OX=3662 GN=LOC1114470...	[more]
A0A6J1I6J4	7.3e-125	83.08	uncharacterized protein LOC111470086 OS=Cucurbita maxima OX=3661 GN=LOC111470086...	[more]
A0A0A0LA11	2.6e-122	83.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733200 PE=4 SV=1	[more]
A0A5A7TRW4	5.4e-120	82.31	F-box protein SKIP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G...	[more]
A0A1S3B5S8	5.4e-120	82.31	uncharacterized protein LOC103486341 OS=Cucumis melo OX=3656 GN=LOC103486341 PE=...	[more]

BLAST of Lag0027208 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09250.1	1.0e-70	52.36	Nuclear transport factor 2 (NTF2) family protein	[more]
AT3G09250.2	5.1e-62	55.29	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.1	4.3e-13	29.91	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.2	4.3e-13	29.91	Nuclear transport factor 2 (NTF2) family protein	[more]
AT4G10925.3	4.3e-13	29.91	Nuclear transport factor 2 (NTF2) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037401	SnoaL-like domain	PFAM	PF13474	SnoaL_3	coord: 126..242 e-value: 3.1E-24 score: 85.7
None	No IPR available	GENE3D	3.10.450.50		coord: 115..244 e-value: 2.0E-42 score: 146.6
None	No IPR available	PANTHER	PTHR34957	NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEIN	coord: 57..244
IPR001943	UVR domain	PFAM	PF02151	UVR	coord: 90..120 e-value: 1.0E-6 score: 28.3
IPR001943	UVR domain	PROSITE	PS50151	UVR	coord: 86..121 score: 8.313559
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 121..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027208.1	Lag0027208.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding