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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGCGCCGTTTGTTCAACGAAGCACTGCATCAGCACCGCCGGCAGTGGCCGTCCGCCGCGCGCCGCCTACATCAACCTCTACAACTGGACGGATTCCGACGGCGAGATCGTCAAATCGGCGATTCCGAGAGCGAGCCGGCGAGTTCCGGTGGCCGATGGAATTTCTTGCAGGCAAATGTACTTGCGGAGCTATAAATTCTCGACGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTATTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAAACAGAGGAGAAGATCGAGCGATAAGAGGAATAATCAGAATCTGAATCGGAAGAGGAAGAGGAAGTGCTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCAGTTTCATTCTGTTTGGGATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTTGTGGAGCAGAGTAGTGGAAGAAATGGTAATCGATTCTGA mRNA sequence ATGAGCGCCGTTTGTTCAACGAAGCACTGCATCAGCACCGCCGGCAGTGGCCGTCCGCCGCGCGCCGCCTACATCAACCTCTACAACTGGACGGATTCCGACGGCGAGATCGTCAAATCGGCGATTCCGAGAGCGAGCCGGCGAGTTCCGGTGGCCGATGGAATTTCTTGCAGGCAAATGTACTTGCGGAGCTATAAATTCTCGACGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTATTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAAACAGAGGAGAAGATCGAGCGATAAGAGGAATAATCAGAATCTGAATCGGAAGAGGAAGAGGAAGTGCTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCAGTTTCATTCTGTTTGGGATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTTGTGGAGCAGAGTAGTGGAAGAAATGGTAATCGATTCTGA Coding sequence (CDS) ATGAGCGCCGTTTGTTCAACGAAGCACTGCATCAGCACCGCCGGCAGTGGCCGTCCGCCGCGCGCCGCCTACATCAACCTCTACAACTGGACGGATTCCGACGGCGAGATCGTCAAATCGGCGATTCCGAGAGCGAGCCGGCGAGTTCCGGTGGCCGATGGAATTTCTTGCAGGCAAATGTACTTGCGGAGCTATAAATTCTCGACGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTATTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAAACAGAGGAGAAGATCGAGCGATAAGAGGAATAATCAGAATCTGAATCGGAAGAGGAAGAGGAAGTGCTTGATTTGGAGGAAGATGAAGGAATTTTCGTGCAGTTTCATTCTGTTTGGGATTTTTCGAAGGATTTTGTCATGTGCTGCGAGTATTGATGTTGTGGAGCAGAGTAGTGGAAGAAATGGTAATCGATTCTGA Protein sequence MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQMYLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRNNQNLNRKRKRKCLIWRKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGNRF
Homology
BLAST of Lag0027116 vs. NCBI nr
Match: XP_023528009.1 (uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 240.7 bits (613), Expect = 8.2e-60 Identity = 123/155 (79.35%), Postives = 134/155 (86.45%), Query Frame = 0
Query: 1 MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQM 60
MSAVC+T +CIST SGRPPRAAYINL NWTDSD E KSAIPR RRVPV DG+SCRQM
Sbjct: 1 MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60
Query: 61 YLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRN-NQNLNRKRKRKCLIWRKM 120
YLRSYKFSTKESV EKTRR L KVKEKLGQ++RR+S DKRN NQN NR RKRKC IWRKM
Sbjct: 61 YLRSYKFSTKESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRKM 120
Query: 121 KEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
K+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Sbjct: 121 KKFSCSFVLFRIFRRILTCSASVDVVEQRSGSNGN 155
BLAST of Lag0027116 vs. NCBI nr
Match: XP_022983914.1 (uncharacterized protein LOC111482393 [Cucurbita maxima]) HSP 1 Score: 239.2 bits (609), Expect = 2.4e-59 Identity = 122/155 (78.71%), Postives = 134/155 (86.45%), Query Frame = 0
Query: 1 MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQM 60
MSAVC+T +CIST SGRPPRAAYINL NWTDSD E KSAIPR RRVPV DG+SCRQM
Sbjct: 1 MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60
Query: 61 YLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRN-NQNLNRKRKRKCLIWRKM 120
YLRSYKFSTKESV EKTRR L KVKEKLGQ++RR+S DKRN N+N NR RKRKC IWRKM
Sbjct: 61 YLRSYKFSTKESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNRNRNRNRKRKCFIWRKM 120
Query: 121 KEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
K+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Sbjct: 121 KKFSCSFVLFRIFRRILTCSASVDVVEQRSGSNGN 155
BLAST of Lag0027116 vs. NCBI nr
Match: XP_022934190.1 (uncharacterized protein LOC111441435 [Cucurbita moschata]) HSP 1 Score: 238.8 bits (608), Expect = 3.1e-59 Identity = 122/155 (78.71%), Postives = 133/155 (85.81%), Query Frame = 0
Query: 1 MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQM 60
MSAVC+T +CIST SGRPPRAAYINL NWTDSD E KSAIPR RRVPV DG+SCRQM
Sbjct: 1 MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQM 60
Query: 61 YLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRN-NQNLNRKRKRKCLIWRKM 120
YLRSYKFSTKESV EKTRR L KVKEKLGQ++RR+S DKRN NQN NR RKRKC IWRKM
Sbjct: 61 YLRSYKFSTKESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRKM 120
Query: 121 KEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
K+FSCSF+LF IFRRIL+C+AS+DVVE SG NGN
Sbjct: 121 KKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155
BLAST of Lag0027116 vs. NCBI nr
Match: KAG7017326.1 (hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.3 bits (604), Expect = 9.1e-59 Identity = 121/155 (78.06%), Postives = 133/155 (85.81%), Query Frame = 0
Query: 1 MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQM 60
MSAVC+T +CIST SGRPPRAAYINL NWTDSD E KSAIPR RRVPV DG+SCRQ+
Sbjct: 1 MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDSDNETDKSAIPRTRRRVPVVDGVSCRQI 60
Query: 61 YLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRN-NQNLNRKRKRKCLIWRKM 120
YLRSYKFSTKESV EKTRR L KVKEKLGQ++RR+S DKRN NQN NR RKRKC IWRKM
Sbjct: 61 YLRSYKFSTKESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRKM 120
Query: 121 KEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
K+FSCSF+LF IFRRIL+C+AS+DVVE SG NGN
Sbjct: 121 KKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155
BLAST of Lag0027116 vs. NCBI nr
Match: KAG6580574.1 (hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.5 bits (602), Expect = 1.6e-58 Identity = 121/155 (78.06%), Postives = 132/155 (85.16%), Query Frame = 0
Query: 1 MSAVCSTKHCISTAGSGRPPRAAYINLYNWTDSDGEIVKSAIPRASRRVPVADGISCRQM 60
MSAVC+T +CIST SGRPPRAAYINL NWTD D E KSAIPR RRVPV DG+SCRQM
Sbjct: 1 MSAVCTTNYCISTVDSGRPPRAAYINLSNWTDLDNETDKSAIPRTRRRVPVVDGVSCRQM 60
Query: 61 YLRSYKFSTKESVPEKTRRYLGKVKEKLGQKQRRRSSDKRN-NQNLNRKRKRKCLIWRKM 120
YLRSYKFSTKESV EKTRR L KVKEKLGQ++RR+S DKRN NQN NR RKRKC IWRKM
Sbjct: 61 YLRSYKFSTKESVREKTRRCLWKVKEKLGQRKRRKSGDKRNQNQNRNRNRKRKCFIWRKM 120
Query: 121 KEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN 155
K+FSCSF+LF IFRRIL+C+AS+DVVE SG NGN
Sbjct: 121 KKFSCSFVLFRIFRRILTCSASVDVVEHRSGSNGN 155
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_023528009.1 | 8.2e-60 | 79.35 | uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022983914.1 | 2.4e-59 | 78.71 | uncharacterized protein LOC111482393 [Cucurbita maxima] | [more] |
| XP_022934190.1 | 3.1e-59 | 78.71 | uncharacterized protein LOC111441435 [Cucurbita moschata] | [more] |
| KAG7017326.1 | 9.1e-59 | 78.06 | hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6580574.1 | 1.6e-58 | 78.06 | hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..104 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 70..103 |
| None | No IPR available | PANTHER | PTHR35304 | OS05G0120300 PROTEIN-RELATED | coord: 1..148 |
| None | No IPR available | PANTHER | PTHR35304:SF1 | OS05G0120300 PROTEIN | coord: 1..148 |
Relationships
The following mRNA feature(s) are a part of this gene:
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