Lag0027111 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0027111
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RING-type domain-containing protein
Location	chr10: 45127059 .. 45127943 (-)
RNA-Seq Expression	Lag0027111
Synteny	Lag0027111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAATTATTAGAACCCCCTGCTGTCATCATGGCCGCCCTCTCCGCCCTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATCTTCTCCGACATCCACCACCGCCGCCGCCGCCTCACCTTCATCCTCTCCTCCCCAACCCTCTTCTCCCTCACTCTCCGCCACCTCAATTCACTCTCCCTCTCCCACAAATCTCTCCTCATCGCCCGCTTCCTTCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGCCGCCGTCCAAGTCCCTCCCCCACCACCCCTCCACCGCCGCCGTCACCCCCCGGGACCTCGACGCCGCCGTCCTTCTCCTCCTCCTCTGCGAGGTCCGACAGCACAGTCCTGCCGCCCTCCAAACTCCGATCACAAAATGGCGATCGACCCTCTGCAGAATCTACTCCGATTCCCTCTTGACGGTCTCCGGCGTCGCCACCGGCGGCCCCGGGGTTCTTATTCCGTACATTGAGACGGTGGCGAGGTGCTGGAAGTTCGTGGGGTTCGTCGGGAGCTGCAGCGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCGGTGGCGGTGGTGGAGCTGCCGTCGGTGGCGGTGGGCGGCGGGGCGGCGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGGACGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAACACTTATTCCATTGGCTCTGTATTCTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCAACCGATGACATTTTCGGCGAGATCCAACGGCTCTGGGAGATCCTCGTCAAGGTGGGCTCCACGTCTGATGGAGATCAACGTCCAGGATTGAATGGTCGCATGGAATTAGGATAG

mRNA sequence

ATGGAAGAATTATTAGAACCCCCTGCTGTCATCATGGCCGCCCTCTCCGCCCTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATCTTCTCCGACATCCACCACCGCCGCCGCCGCCTCACCTTCATCCTCTCCTCCCCAACCCTCTTCTCCCTCACTCTCCGCCACCTCAATTCACTCTCCCTCTCCCACAAATCTCTCCTCATCGCCCGCTTCCTTCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGCCGCCGTCCAAGTCCCTCCCCCACCACCCCTCCACCGCCGCCGTCACCCCCCGGGACCTCGACGCCGCCGTCCTTCTCCTCCTCCTCTGCGAGGTCCGACAGCACAGTCCTGCCGCCCTCCAAACTCCGATCACAAAATGGCGATCGACCCTCTGCAGAATCTACTCCGATTCCCTCTTGACGGTCTCCGGCGTCGCCACCGGCGGCCCCGGGGTTCTTATTCCGTACATTGAGACGGTGGCGAGGTGCTGGAAGTTCGTGGGGTTCGTCGGGAGCTGCAGCGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCGGTGGCGGTGGTGGAGCTGCCGTCGGTGGCGGTGGGCGGCGGGGCGGCGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGGACGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAACACTTATTCCATTGGCTCTGTATTCTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCAACCGATGACATTTTCGGCGAGATCCAACGGCTCTGGGAGATCCTCGTCAAGGTGGGCTCCACGTCTGATGGAGATCAACGTCCAGGATTGAATGGTCGCATGGAATTAGGATAG

Coding sequence (CDS)

ATGGAAGAATTATTAGAACCCCCTGCTGTCATCATGGCCGCCCTCTCCGCCCTCTCTCCGCCGCATCTCTCCGATCTCTCCCACTCCATCTTCTCCGACATCCACCACCGCCGCCGCCGCCTCACCTTCATCCTCTCCTCCCCAACCCTCTTCTCCCTCACTCTCCGCCACCTCAATTCACTCTCCCTCTCCCACAAATCTCTCCTCATCGCCCGCTTCCTTCTCTCCGCCCTCCGCCGCCTCTCCCGCCCCTTCCAGCCGCCGTCCAAGTCCCTCCCCCACCACCCCTCCACCGCCGCCGTCACCCCCCGGGACCTCGACGCCGCCGTCCTTCTCCTCCTCCTCTGCGAGGTCCGACAGCACAGTCCTGCCGCCCTCCAAACTCCGATCACAAAATGGCGATCGACCCTCTGCAGAATCTACTCCGATTCCCTCTTGACGGTCTCCGGCGTCGCCACCGGCGGCCCCGGGGTTCTTATTCCGTACATTGAGACGGTGGCGAGGTGCTGGAAGTTCGTGGGGTTCGTCGGGAGCTGCAGCGGCGGGAAGGCCCGGAGAGAGGTGGCGGCGTCGCCGGTGGCGGTGGTGGAGCTGCCGTCGGTGGCGGTGGGCGGCGGGGCGGCGGCGGTGGAATGTGTGATTTGTAAAGAGGAGATGGACGAAGGGAGAGACGCGTGTCAATTGCCTTGTGAACACTTATTCCATTGGCTCTGTATTCTGCCATGGCTGAGGAAGAGGAACACGTGTCCCTGTTGCAGGTTTCAGCTTCCAACCGATGACATTTTCGGCGAGATCCAACGGCTCTGGGAGATCCTCGTCAAGGTGGGCTCCACGTCTGATGGAGATCAACGTCCAGGATTGAATGGTCGCATGGAATTAGGATAG

Protein sequence

MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSLSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQHSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCSGGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGDQRPGLNGRMELG

Homology

[Close]

BLAST of Lag0027111 vs. NCBI nr
Match: KAG6596438.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504.2 bits (1297), Expect = 7.5e-139
Identity = 253/282 (89.72%), Postives = 265/282 (93.97%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LSPPHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLLIARFLLSALRRLSRPFQ PSKS PHHPSTAAVTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT+WRSTLCRIYSDSLLT+SG+ATGG G  IPYIETVARCWKFVGFV S +
Sbjct: 121 HNPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS+SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of Lag0027111 vs. NCBI nr
Match: XP_023538929.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 501.1 bits (1289), Expect = 6.4e-138
Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LSPPHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLS+KSLLIARFLLSALRRLSRPFQ PSKS PHHPSTAAVTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSNKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT+WRSTLCRIYSDSLLT+SG+ATGG G  IPYIETVARCWKFVGFV S +
Sbjct: 121 HNPAALETPITRWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of Lag0027111 vs. NCBI nr
Match: XP_022935892.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita moschata])

HSP 1 Score: 501.1 bits (1289), Expect = 6.4e-138
Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LS PHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSSPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLLIARFLLSALRRLSRPFQ PSKS PHHPSTAAVTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT+WRSTLCRIYSDSLLT+SG+ATGG G  IPYIETVARCWKFVGFV S +
Sbjct: 121 HNPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS+SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of Lag0027111 vs. NCBI nr
Match: XP_023005737.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita maxima])

HSP 1 Score: 499.2 bits (1284), Expect = 2.4e-137
Identity = 250/282 (88.65%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LSPPHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLL+ARFLLSALRRLSRPFQ PSKS PHHPSTA VTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT WRSTLCRIYSDSLLT+SG+ATGG G +IPYIETV RCWKFVGFV S +
Sbjct: 121 HNPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of Lag0027111 vs. NCBI nr
Match: XP_038905798.1 (E3 ubiquitin-protein ligase SGR9, amyloplastic [Benincasa hispida])

HSP 1 Score: 495.4 bits (1274), Expect = 3.5e-136
Identity = 249/283 (87.99%), Postives = 261/283 (92.23%), Query Frame = 0


Query: 3   ELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSLS 62
           E LEPP VIMAALSALSPP LSDLSHSIFSDIH  RRRLTFILSSPTLFSLTLRHLNSLS
Sbjct: 2   EKLEPPTVIMAALSALSPPSLSDLSHSIFSDIHLHRRRLTFILSSPTLFSLTLRHLNSLS 61

Query: 63  LSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQHS 122
           LSHKSLL+ARFLLS LRRLS PFQ  SK  PHHPSTA ++P+DLDAAVLLLLLCEVRQH+
Sbjct: 62  LSHKSLLLARFLLSTLRRLSCPFQSQSKLFPHHPSTATISPQDLDAAVLLLLLCEVRQHN 121

Query: 123 PAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCSGG 182
           PAAL+TPITKWR+TLCRIYSDSLLT+SG+ATGG G LIPYIETV RCWKFVGFVGSC GG
Sbjct: 122 PAALRTPITKWRATLCRIYSDSLLTISGIATGGGGALIPYIETVVRCWKFVGFVGSC-GG 181

Query: 183 KARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPW 242
           KARREVAASPVAVVELPSVAVGGG A VECVICKEEM EGRDAC+LPC+HLFHWLCILPW
Sbjct: 182 KARREVAASPVAVVELPSVAVGGGGALVECVICKEEMVEGRDACKLPCDHLFHWLCILPW 241

Query: 243 LRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGS---TSDGD 283
           LRKRNTCPCCRFQLPTDDIFGEIQRLWEIL+KVGS   TSDGD
Sbjct: 242 LRKRNTCPCCRFQLPTDDIFGEIQRLWEILLKVGSTMCTSDGD 283

[Close]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot
Match: Q8GXF8 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SGR9 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-70
Identity = 153/280 (54.64%), Postives = 181/280 (64.64%), Query Frame = 0


Query: 6   EPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSLSLSH 65
           E   +IMA+LSALSP HL++L+HSI S  HH RRRL  +LSSPTLFSLTLRHL SLSL  
Sbjct: 4   ENTTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSLPD 63

Query: 66  KSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTP-RDLDAAVLLLLLCEVRQHSPA 125
           K+ LIA  LLS L        P      HH S A     RDLDA VLLL LCE  Q  P 
Sbjct: 64  KTHLIANHLLSLL-------HPLLIHRKHHSSYAVTMKLRDLDAVVLLLFLCETHQLHPD 123

Query: 126 ALQTPITKWRSTLCRIYSDSLLT-VSGVATGGPGVLIPYIETVARCWKFVGFVGSCSGGK 185
            L+     WR  L   YS+++L+  SG+ T   G+L+PYIET+ RC +FV  +G  +  +
Sbjct: 124 VLEASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYNHLR 183

Query: 186 AR-----REVAASPVAVVELPSVAV----GGGAAAVECVICKEEMDEGRDACQLPCEHLF 245
            R      +V A+  AVV L +V V       A  VECVICKEEM EGRD C++PC+H F
Sbjct: 184 RRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQHFF 243

Query: 246 HWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVK 275
           HW CILPWL K+NTCP CRFQLPTDD+F EIQRLWEILVK
Sbjct: 244 HWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot
Match: Q9P0P0 (E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.1e-15
Identity = 34/71 (47.89%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 190 ASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRNTC 249
           A+   V  LP   + G  A ++C +C  E +E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNSC 113

Query: 250 PCCRFQLPTDD 261
           P CR++LPTDD
Sbjct: 114 PLCRYELPTDD 124

[Close]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.3e-15
Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 190 ASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRNTC 249
           A+  AV  LP   + G  A ++C +C  E +E   A ++PC HLFH  CILPWL K N+C
Sbjct: 54  AAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNSC 113

Query: 250 PCCRFQLPTDD 261
           P CR +LPTDD
Sbjct: 114 PLCRHELPTDD 124

[Close]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot
Match: Q6GPV5 (E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.0e-14
Identity = 39/72 (54.17%), Postives = 45/72 (62.50%), Query Frame = 0


Query: 190 ASPVAVVELPSVAV--GGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRN 249
           AS   V  LP V V      AA++C +C  E +EG    QLPCEHLFH  CILPWL K N
Sbjct: 55  ASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKTN 114

Query: 250 TCPCCRFQLPTD 260
           +CP CR +LPTD
Sbjct: 115 SCPLCRHELPTD 126

[Close]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 190 ASPVAVVELPSVAVGGGAAAVE---CVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKR 249
           AS  A+  LP+V V       E   C +C +E ++G D  Q+PC+H+FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 250 NTCPCCRFQLPTDD 261
           N+CP CRF+LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of Lag0027111 vs. ExPASy TrEMBL
Match: A0A6J1F6V7 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=LOC111442657 PE=4 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 3.1e-138
Identity = 252/282 (89.36%), Postives = 264/282 (93.62%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LS PHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSSPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLLIARFLLSALRRLSRPFQ PSKS PHHPSTAAVTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSHKSLLIARFLLSALRRLSRPFQTPSKSFPHHPSTAAVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT+WRSTLCRIYSDSLLT+SG+ATGG G  IPYIETVARCWKFVGFV S +
Sbjct: 121 HNPAALETPITQWRSTLCRIYSDSLLTISGIATGGAGAFIPYIETVARCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS+SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSSSDGD 280

[Close]

BLAST of Lag0027111 vs. ExPASy TrEMBL
Match: A0A6J1KTZ6 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita maxima OX=3661 GN=LOC111498644 PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 1.2e-137
Identity = 250/282 (88.65%), Postives = 262/282 (92.91%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE L+P  VIMAALS LSPPHLSDLSHSIFSD+H  RRRLTFILSSPTLFS TLRHLNS
Sbjct: 1   MEE-LKPSTVIMAALSTLSPPHLSDLSHSIFSDVHTSRRRLTFILSSPTLFSFTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLL+ARFLLSALRRLSRPFQ PSKS PHHPSTA VTPRDLDAAVLLLLLC+VRQ
Sbjct: 61  LSLSHKSLLVARFLLSALRRLSRPFQTPSKSFPHHPSTAFVTPRDLDAAVLLLLLCDVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPIT WRSTLCRIYSDSLLT+SG+ATGG G +IPYIETV RCWKFVGFV S +
Sbjct: 121 HNPAALETPITHWRSTLCRIYSDSLLTISGIATGGSGAIIPYIETVGRCWKFVGFVVSRN 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGKARREVAASPVAVVELPSVAV GG  AVECVICKEEM+EGRDACQLPCEHLFHWLCIL
Sbjct: 181 GGKARREVAASPVAVVELPSVAV-GGCMAVECVICKEEMNEGRDACQLPCEHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGSTSDGD 283
           PWLRKRNTCPCCRFQLPTDDIFGEIQRLW+ILVKVGS SDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWDILVKVGSPSDGD 280

[Close]

BLAST of Lag0027111 vs. ExPASy TrEMBL
Match: A0A1S4DUS9 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103486430 PE=4 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.4e-136
Identity = 244/286 (85.31%), Postives = 266/286 (93.01%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE LEPP+VIMAAL+ LSPP L+DLSHSIFS++H  RRRLTFILSSPTLFSLTLRHLNS
Sbjct: 1   MEE-LEPPSVIMAALATLSPPRLTDLSHSIFSEVHQHRRRLTFILSSPTLFSLTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLL+ARFLLSALRRLSRPFQ PSK LP+HPSTAA++P+DLDAAVLLLLLCEVRQ
Sbjct: 61  LSLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPITKWR+TLCRIYS+SLLT+SG+ATGG G LIPYI+TV RCWKFVGFVGSC 
Sbjct: 121 HNPAALRTPITKWRATLCRIYSESLLTISGLATGGGGALIPYIDTVVRCWKFVGFVGSC- 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGK RREVAASP+AVVELPSVAVGGG   VECVICKEEM EGRDAC+LPC+HLFHWLCIL
Sbjct: 181 GGKVRREVAASPMAVVELPSVAVGGGGGTVECVICKEEMGEGRDACKLPCDHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGS---TSDGDQ 284
           PWLRKRNTCPCCRFQLPTDD+FGEIQRLWEIL KVGS   TSDGD+
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDVFGEIQRLWEILFKVGSTMCTSDGDE 284

[Close]

BLAST of Lag0027111 vs. ExPASy TrEMBL
Match: A0A0A0LAQ3 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.4e-135
Identity = 246/285 (86.32%), Postives = 265/285 (92.98%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE LEPP+VI AAL+ LSPP L+DLSHSIFS+IH  RRRLTFILSSPTLFSLTLRHLNS
Sbjct: 1   MEE-LEPPSVITAALATLSPPRLADLSHSIFSEIHQHRRRLTFILSSPTLFSLTLRHLNS 60

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLL+ARFLLSALRRLSRPFQ PSK LP+HPSTAA++P+DLDAAVLLLLLCEVRQ
Sbjct: 61  LSLSHKSLLLARFLLSALRRLSRPFQSPSKLLPYHPSTAAISPQDLDAAVLLLLLCEVRQ 120

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TPITKWR+TLC+IYSDSLLTVSG+ATGG G LIPYI+TV RCWKFVGFVGSC 
Sbjct: 121 HNPAALRTPITKWRATLCKIYSDSLLTVSGLATGGGGALIPYIDTVVRCWKFVGFVGSC- 180

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGK RREVAASP+AVVELPSVAVGGG AAVECVICKEEM EGRDAC+LPC+HLFHWLCIL
Sbjct: 181 GGKVRREVAASPMAVVELPSVAVGGGGAAVECVICKEEMGEGRDACKLPCDHLFHWLCIL 240

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGS---TSDGD 283
           PWLRKRNTCPCCRFQLPTDD+ GEIQRLWEIL KVGS   TSDGD
Sbjct: 241 PWLRKRNTCPCCRFQLPTDDVLGEIQRLWEILFKVGSTMCTSDGD 283

[Close]

BLAST of Lag0027111 vs. ExPASy TrEMBL
Match: A0A6J1CX45 (E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN=LOC111015097 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.2e-134
Identity = 245/285 (85.96%), Postives = 263/285 (92.28%), Query Frame = 0


Query: 1   MEELLEPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 60
           MEE LEPP VIMAALSALSP HLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS
Sbjct: 30  MEE-LEPPTVIMAALSALSPLHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNS 89

Query: 61  LSLSHKSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTPRDLDAAVLLLLLCEVRQ 120
           LSLSHKSLLIARFLLSALRRL  PFQPP+KSLP HPSTAA+TPRDLDAAVLLLLLCEVRQ
Sbjct: 90  LSLSHKSLLIARFLLSALRRLCHPFQPPAKSLPQHPSTAAITPRDLDAAVLLLLLCEVRQ 149

Query: 121 HSPAALQTPITKWRSTLCRIYSDSLLTVSGVATGGPGVLIPYIETVARCWKFVGFVGSCS 180
           H+PAAL+TP+ KWR+ LCRIYSDS+L++SG+ +GG  V++PY+ETVARCWKFVGFVGSC 
Sbjct: 150 HNPAALETPLPKWRAALCRIYSDSILSISGIISGGGAVMVPYVETVARCWKFVGFVGSC- 209

Query: 181 GGKARREVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCIL 240
           GGK +REVAASPVAVVELPSVA    AAAVECVICKEEM EGRDACQLPCEHLFHWLCIL
Sbjct: 210 GGKGKREVAASPVAVVELPSVA---AAAAVECVICKEEMGEGRDACQLPCEHLFHWLCIL 269

Query: 241 PWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVKVGS---TSDGD 283
           PWLRKRNTCPCCRFQLPTDD+F EIQRLWEIL+K+GS   TSDGD
Sbjct: 270 PWLRKRNTCPCCRFQLPTDDVFAEIQRLWEILLKLGSTITTSDGD 309

[Close]

BLAST of Lag0027111 vs. TAIR 10
Match: AT5G02750.1 (RING/U-box superfamily protein )

HSP 1 Score: 266.9 bits (681), Expect = 1.9e-71
Identity = 153/280 (54.64%), Postives = 181/280 (64.64%), Query Frame = 0


Query: 6   EPPAVIMAALSALSPPHLSDLSHSIFSDIHHRRRRLTFILSSPTLFSLTLRHLNSLSLSH 65
           E   +IMA+LSALSP HL++L+HSI S  HH RRRL  +LSSPTLFSLTLRHL SLSL  
Sbjct: 4   ENTTIIMASLSALSPSHLTNLTHSILSISHHHRRRLGAVLSSPTLFSLTLRHLLSLSLPD 63

Query: 66  KSLLIARFLLSALRRLSRPFQPPSKSLPHHPSTAAVTP-RDLDAAVLLLLLCEVRQHSPA 125
           K+ LIA  LLS L        P      HH S A     RDLDA VLLL LCE  Q  P 
Sbjct: 64  KTHLIANHLLSLL-------HPLLIHRKHHSSYAVTMKLRDLDAVVLLLFLCETHQLHPD 123

Query: 126 ALQTPITKWRSTLCRIYSDSLLT-VSGVATGGPGVLIPYIETVARCWKFVGFVGSCSGGK 185
            L+     WR  L   YS+++L+  SG+ T   G+L+PYIET+ RC +FV  +G  +  +
Sbjct: 124 VLEASADNWREILGNTYSNNMLSNNSGLWTCDAGILMPYIETLVRCKRFVDIMGGYNHLR 183

Query: 186 AR-----REVAASPVAVVELPSVAV----GGGAAAVECVICKEEMDEGRDACQLPCEHLF 245
            R      +V A+  AVV L +V V       A  VECVICKEEM EGRD C++PC+H F
Sbjct: 184 RRDQKEGYQVPAARAAVVALRAVEVFNVAASNAGEVECVICKEEMSEGRDVCEMPCQHFF 243

Query: 246 HWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQRLWEILVK 275
           HW CILPWL K+NTCP CRFQLPTDD+F EIQRLWEILVK
Sbjct: 244 HWKCILPWLSKKNTCPFCRFQLPTDDVFSEIQRLWEILVK 276

[Close]

BLAST of Lag0027111 vs. TAIR 10
Match: AT5G08139.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-15
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 192 PVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRNTCPC 251
           PV ++E  +   GG    + C +CK+EM+ G  A QLPC H +H  CI+PWL+ RNTCP 
Sbjct: 293 PVVLLEGENDDDGG----LVCAVCKDEMNIGNKAVQLPCNHKYHSECIVPWLKVRNTCPV 352

Query: 252 CRFQLPTDD 261
           CR++LPTDD
Sbjct: 353 CRYELPTDD 357

[Close]

BLAST of Lag0027111 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 7.3e-15
Identity = 35/74 (47.30%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 190 ASPVAVVELPSVAVGGGAAAVE---CVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKR 249
           AS  A+  LP+V V       E   C +C +E ++G D  Q+PC+H+FH  C+LPWL   
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 250 NTCPCCRFQLPTDD 261
           N+CP CRF+LPTDD
Sbjct: 251 NSCPVCRFELPTDD 264

[Close]

BLAST of Lag0027111 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-14
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 209 AVECVICKEEMDEGRDACQLPCEHLFHWLCILPWLRKRNTCPCCRFQLPTD 260
           AV C +CKEEM  G++  +LPC H +H  CI+PWL  RNTCP CRF+LP+D
Sbjct: 369 AVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPSD 419

[Close]

BLAST of Lag0027111 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 76.6 bits (187), Expect = 3.6e-14
Identity = 39/94 (41.49%), Postives = 50/94 (53.19%), Query Frame = 0


Query: 177 GSCSGGKARR---EVAASPVAVVELPSVAVGGGAAAVECVICKEEMDEGRDACQLPCEHL 236
           G   GG  RR     A S +  +E   V+   G   + C +CK+ M  G    +LPC H 
Sbjct: 219 GDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHC 278

Query: 237 FHWLCILPWLRKRNTCPCCRFQLPTDDIFGEIQR 268
           +H  CI+PWL  RN+CP CRFQL TDD   E +R
Sbjct: 279 YHGDCIVPWLGTRNSCPVCRFQLETDDAEYEEER 312

The following BLAST results are available for this feature:

BLAST of Lag0027111 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596438.1	7.5e-139	89.72	E3 ubiquitin-protein ligase SGR9, amyloplastic, partial [Cucurbita argyrosperma ...	[more]
XP_023538929.1	6.4e-138	89.36	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022935892.1	6.4e-138	89.36	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita moschata]	[more]
XP_023005737.1	2.4e-137	88.65	E3 ubiquitin-protein ligase SGR9, amyloplastic [Cucurbita maxima]	[more]
XP_038905798.1	3.5e-136	87.99	E3 ubiquitin-protein ligase SGR9, amyloplastic [Benincasa hispida]	[more]

BLAST of Lag0027111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GXF8	2.7e-70	54.64	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9P0P0	7.1e-15	47.89	E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens OX=9606 GN=RNF181 PE=1 SV=1	[more]
Q3T0W3	9.3e-15	49.30	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1	[more]
Q6GPV5	6.0e-14	54.17	E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis OX=8355 GN=rnf181 PE=2 SV=1	[more]
Q8LPN7	1.0e-13	47.30	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]

BLAST of Lag0027111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6V7	3.1e-138	89.36	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KTZ6	1.2e-137	88.65	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A1S4DUS9	6.4e-136	85.31	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LAQ3	1.4e-135	86.32	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G736610 P...	[more]
A0A6J1CX45	1.2e-134	85.96	E3 ubiquitin-protein ligase SGR9, amyloplastic OS=Momordica charantia OX=3673 GN...	[more]

BLAST of Lag0027111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02750.1	1.9e-71	54.64	RING/U-box superfamily protein	[more]
AT5G08139.1	2.5e-15	50.72	RING/U-box superfamily protein	[more]
AT3G19950.1	7.3e-15	47.30	RING/U-box superfamily protein	[more]
AT5G60820.1	2.1e-14	58.82	RING/U-box superfamily protein	[more]
AT5G64920.1	3.6e-14	41.49	COP1-interacting protein 8	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 212..252 e-value: 6.4E-6 score: 35.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 211..253 e-value: 3.9E-11 score: 43.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 212..253 score: 12.1057
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 205..263 e-value: 1.9E-17 score: 64.2
None	No IPR available	PANTHER	PTHR15710:SF67	E3 UBIQUITIN-PROTEIN LIGASE SGR9, AMYLOPLASTIC	coord: 3..278
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 3..278
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 206..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0027111.1	Lag0027111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0009501	amyloplast
molecular_function	GO:0061630	ubiquitin protein ligase activity