Lag0026615 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026615
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr10: 39679318 .. 39680738 (+)
RNA-Seq Expression	Lag0026615
Synteny	Lag0026615

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGAGTCAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAACAAACCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTTAGTGAAGATAATGGAGAAAGAGAGAGAGTAGAGCGGAGTGTGAACCGAGACAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAATAAATCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGTGTCTAGTCAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGACACATTGGCAATGAAGAAGGCGAAGTTCTTGATTACAGAACAAACCAAAATGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTAAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGGAGTGTGAACCGAGACAATGACAATGAAGTAGGTGAAGTTCTTGATTACAGAACAACTAATGACCTAGCTTCCACGTAAGCTAAATCCGTTGAGTCGTTAACGCCACGTATATTTCCCATTGTGGCATTATTTATCGGTGGAGAAAAATTACAAAATAGACCACCAAATGATCTTTTAAACAATTCTTCCTAATAATCTATTAACTATTCAAATAGAGGGTGTTTTTTCCATTGATAACCAATTTGGTGTTTTATTTTTTGATTTAAGCCAAATTCTAAAACTAAAAAGAAGTTTTTGAATGCGGGTGAAAATTTATTTGCTAGAACTGAAAAGAAGTTTTTTGAAGTTCCCTTCCGTGTGAAGGTTTTTCTCTCAATATGAGAGCTTCCCTTCCATGTGAAGGTTTTTAGGGTTTATCGGCGGCGCGGCGGGCGTTTCCGAGCAGAGGCTGGGGTTCGGTCTAGCATTTGATAGGAACGTTGCAAGAGTGGTCTTGTTGTTTCCCTTCAGGAGTGCAGGTGAGGTTAGTAGTTTACTAGATATCGACAGAGGCAATCAGAGGGAGCATAGATCTGGGTATCGCGGGGTCTTTCTGATTCGGTGGACGACGACGGGGGCTAATCTTCTTTGCGGTCTTCTCTTTCTGTGCAACCGAGGTGAGGTTGGTCGGAATTGAGGGGCGCTGATCGGAGGGAGTGTTGGTTTCGGTTTTGGTTTTGCAGGTATCATTTTGTCTAGGTTTCGGTTTTGGTTTTGCAGGTATCATTTTGTCTAAGTTTCGGTGATTGGAATTGATGGAGCGGTTTTTGTGAAACTGGTGGTTTCGTGTGGTTGTGGACAAAGGTTTGTGCGGTTGATTGAGTCCTGGTCCTGTAATTTGTTGTTGTTTGTGGTTTCTCGGTTGTGTTTGTGCTTTGTGTTTTGGTAGTGGGTTGTGCGCTGGCAGTGGTTTGGTAGTGGGTGTGCGCTGA

mRNA sequence

ATGAAGAAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGAGTCAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAACAAACCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTTAGTGAAGATAATGGAGAAAGAGAGAGAGTAGAGCGGAGTGTGAACCGAGACAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAATAAATCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGTGTCTAGTCAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGACACATTGGCAATGAAGAAGGCGAAGTTCTTGATTACAGAACAAACCAAAATGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTAAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGGAGTGTGAACCGAGACAATGACAATGAAGTAGGTGAAGTTCTTGATTACAGAACAACTAATGACCTAGCTTCCACGTTTTTAGGGTTTATCGGCGGCGCGGCGGGCGTTTCCGAGCAGAGGCTGGGGTTCGGTCTAGCATTTGATAGGAACGTTGCAAGAGTGGTCTTGTTGTTTCCCTTCAGGAGTGCAGGTGAGGTTAGTAGTTTACTAGATATCGACAGAGGCAATCAGAGGGAGCATAGATCTGGGTATCGCGGGGTCTTTCTGATTCGGTGGACGACGACGGGGGCTAATCTTCTTTGCGGTCTTCTCTTTCTGTGCAACCGAGTTTCGGTGATTGGAATTGATGGAGCGGTTTTTGTGAAACTGGTGGTTTCGTGTGGTTGTGGACAAAGTGGGTTGTGCGCTGGCAGTGGTTTGGTAGTGGGTGTGCGCTGA

Coding sequence (CDS)

ATGAAGAAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGAGTCAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAACAAACCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTTAGTGAAGATAATGGAGAAAGAGAGAGAGTAGAGCGGAGTGTGAACCGAGACAATGGCAATGAAGGAGGCGAAGTTCTTGATTACAGAATAAATCAAAACGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGTGTCTAGTCAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGAAGTGTGAACCGACACATTGGCAATGAAGAAGGCGAAGTTCTTGATTACAGAACAAACCAAAATGTCAAAAGGTCCAAGAAATTAGAGAAGAAAAGGCGTCGAGTAAGTGAAGATAATGGAGAAAGAGAGAGAGCAGAGCGGAGTGTGAACCGAGACAATGACAATGAAGTAGGTGAAGTTCTTGATTACAGAACAACTAATGACCTAGCTTCCACGTTTTTAGGGTTTATCGGCGGCGCGGCGGGCGTTTCCGAGCAGAGGCTGGGGTTCGGTCTAGCATTTGATAGGAACGTTGCAAGAGTGGTCTTGTTGTTTCCCTTCAGGAGTGCAGGTGAGGTTAGTAGTTTACTAGATATCGACAGAGGCAATCAGAGGGAGCATAGATCTGGGTATCGCGGGGTCTTTCTGATTCGGTGGACGACGACGGGGGCTAATCTTCTTTGCGGTCTTCTCTTTCTGTGCAACCGAGTTTCGGTGATTGGAATTGATGGAGCGGTTTTTGTGAAACTGGTGGTTTCGTGTGGTTGTGGACAAAGTGGGTTGTGCGCTGGCAGTGGTTTGGTAGTGGGTGTGCGCTGA

Protein sequence

MKKRERAERSVNRVNGNEGGEVLDYRTNQNVKRSKKLEKKRRRVSEDNGERERVERSVNRDNGNEGGEVLDYRINQNVKRSKKLEKKRCLVSEDNGERERAERSVNRHIGNEEGEVLDYRTNQNVKRSKKLEKKRRRVSEDNGERERAERSVNRDNDNEVGEVLDYRTTNDLASTFLGFIGGAAGVSEQRLGFGLAFDRNVARVVLLFPFRSAGEVSSLLDIDRGNQREHRSGYRGVFLIRWTTTGANLLCGLLFLCNRVSVIGIDGAVFVKLVVSCGCGQSGLCAGSGLVVGVR

Homology

The following BLAST results are available for this feature:

BLAST of Lag0026615 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026615 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026615 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0026615 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026615.1	Lag0026615.1	mRNA