Lag0026521 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026521
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DNA topoisomerase
Location	chr10: 38356875 .. 38375478 (-)
RNA-Seq Expression	Lag0026521
Synteny	Lag0026521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTGCCTTCTTTTTTCCCTTCCCTCCATAAAAGCTTGGAAATATTTGCAGGCAAGGTTGAATAAGCTAAAACTTCTTGAAGCCATGGGGGTTTTCTTTGAGAGGTGTTTTTATATTAACTTATCAAATGTTGTTTTTGTATTTTTTATTGTCTGTTGATGCGTCTTTTTTCACTTCTGCAGATCTCATGGTTCTGGTGGGGATGAAAATCATGCAGCAGCTAGAGAGGTTGTTCGACGATGTGGACTGTGTCAGGACTCAGATATGGTGCTTAAAAGAAACAGGGTAATGATTTATAAGTTCATGTTCATGGAAAATTAGTTATTTTAGGGCAATAAATCATAAACCCTTTGAAATTAAAGTGAATTTGTCTAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAGGAAACAAACTTTTCATTGAAGAAATGAAAAGAGACTAATGCTCAAAATACAATGAAACAAGAAACGAAAATACAGCCAAACAAAGGAAACAACATAATAATGATAAATACAGCCAATAAGAGACTACAAACGGCTAAGAAACAATTGCAAAAACAGCCCATACGGAAGAACAAACAAGACTTGGGCTTGAAAAATGAAGGCATCCCAATTAAGACAAATATCCTGAATAGAGAAGGTCGAAAAGAGCTTGGACAACGAGCTCCATGACGAGGCTTTGAGACGAGCTGAGTTGAAACGATCCAACCAAGGAAGAGAAGTGTCCTGAAAAACTCTCTGATTTCTTTCAAACCAAATTTCTGATAAAATAGCTTTAACACCATTCAACCATAATAATTTAGGAGCCGGCTAAATAATTGGACCAAATAAAAGTTGTAGCACGTTTTCTTTAAATAACTGATCGAAAACCCAATGAAGCTTGAAGATAGACATAAACTTCCCCCAACAATGGCAAGAAAAAACACACTCAAAGAAAAGGTGCTGCAAGGATTCACTGGCACTTGAACATAAAGGGCAAATGGAAGGAGATAAAACATGAGACGGAAGCCGCCTTTGAAGAACCTCCGAGCTGTTTAAAGAACCAAAGATCATGATCCAACAAAGAATTGTCACAATAAATTCGAATAGGCTTAGTCTGAGAAAACTTGAATTCTTCAAGTATTCTTTTGATCTATATCCCTTCACAAATTCCATGGGCTAAGGCTCTAAACTCTGCTTCAGCACTACTCCTAGCCACTACATTTTGCTTTTTGCTTCGCCATGTAACTAGATTTCCTCCAACAAAGAAACAATAGGCAGAGGTAGATCTTCTATCAGTAGTGCTTCCAGCCCAATCTGCATTTGTATAGATTGTACTTGGAAGTGATTATTCTTTTTGAATAAAATGCCTTTTCCAGGAGCTCCTTTTAAATATCTTAAAATCCTATAGGCAGCTTCGAAATGAGTTGGTCCAGGTGCATGCATAAACTGACTTACCATACTTATATCAAAAGCAATGTCCGGACATGTATGAGACAGATAAATTAGTCTCCCCACAAGTCTTTGGTATCTCTCCTTATCCTTTATTTCTTCTTTTGCTGCTTCTAATTTCAAATTGGGCTCAACCATCATGGGTTGGCTCTAATGGTCAAAAAGGACTATAGAAAAAATAAAGGGCTTAGAGGGCATGGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTACGAGTTTCCTTGGCAACCAAATGTAGTAGGGTCAGGCGGTTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCAGACACTCACGGATATCAAAAAAAAAAAAAAAAAATTCAAATTGGGCTCAATAGGAGTTTCAGCAACTCTGCATCCAAGTAATCCTGTTTCTTCAAGTAAGTCAAGTACATATTTTCTTTGATTTACAAAGATACCTTTCCTTGATCTTGCAAATTCCATCCCAAGGAAATATATTAACGTTCTCAAGTCCTAGATTTGAAATTCAGTTGCAAGGTTTTTCTTGAGATCAGCTAGACCTGCTTCATCATCACCTGTGAGAATAATATCATCTACATAGACAATCAAAATAAAAATTTATTATTCTCAGAGTGTTTATAAAATATAGTATGGTCAGCTTGACTTTGAAGAAACCCAAACCCAGACACAACTTTTCCATACCGTTTGAACCAAGCTCTTGGAGACTGTTTAAGGCCATATAGAGATTTCTTAAATTTGCAAATTTTATTACTTCCAAGTTCCTTTCCAAAACCACCCATAAAAACTTCTTCCTCAAGGTCGCCATTGAGTTTAACATTTTTCACATCAAGTTGGTAGAGAGGCCACTCTGAATTAGCTGCAAGAGACAACAACACTCGAATAGAGTTAATTTTAGCAACTGGGGCAAACGTTTCTTGATAATCAATCCTATATGTTTGAGTGAAGCCTTTAGCTACTAGTCTAGCCTTATATCTCTCAATACTACCATCTGCATTGCATTTTATGGTAAACACCCATTTACAACCCACTGGTTTCTTATCTTTTGGCAACTCTACTATTTCCCAAATCCCATTTTGTTTTAGAGCATTCATCTCCATAACTGCTACTTTCCAATTTTGATCTTCAAAAGCCTCGTGTATATTCTTTGGAACAAACAAGTCATTTATCCTAGAGGTGAAGACTTTATGACTATGTGACAAATTTTGATATGCCATGTAGTTTGCAATAGGATATTTGGTACAACTTCGAGTACCTTTTCTAATGGCTATGGGCATAACAAAATCAGAAATAACTGGCAAAGTATTTTGAATAGTAGAAGTAGGAATGGAAGAAGGATTACCAGATTTTCCAGTTTCAATCGTCAGAGTCTCAGATTGGTTCTGTGAAAGATCAACTATTTGGTCTTGGTTCCTCTGATTGAATTTTCTTCTAGTATAAAACCTAAACTCAGGAACTTGATCAATATAATCATTATGTAGTATTTCTCCCCCTGATTGAGAAGTTTCTATACTTGGCACCAAATGACTAGTAATATAAGGAAAAATAAGGTTAGGCAAAGGAGTAGAAACATCCCAAAAGTTATCTTCCAAATTTGGTTTCTCCCTCTGAAGAGAATTTTGGGTAAAATATGGTTGATTTTCTAAAAAAGACACATCCATGCTCACAAAACATTTTTTTTGTCTGAGGATCAAAACATTTATAGCCTTTTTGATTTGAAGAGGATCAAGTTTTGATCAAAAGTGACTAGGGATGTGAACATAAGTAGTACACCCAAAAATTTAGAGAGGTAAATCAGAATATAGGCGAGATTTTGGAAAAACATTTTTAAAGCAATCAATGGGAGTTTTAAAATTCAAGTTCCTACTAGGCATTCTATTTATTAGATAAGTAGCTGTGAGAATTGCTTTGCCCCATAAATGTTTCGGAACATGCATGGAAAACATTATAGCACGAGCTACACCAAGTAAATGCCTATTTTTTTCTTTCAGCAACACCATTCTGTTGAGGAGTATCTCGACAAGTAGACTGATGAACAATACCTTTATCTTTTAAAAACTCACCAAAAGATTCATTAAAATATTCATTCCATTATCAGAGTGTAAAATGCAAATTTTGGTTTGAAATTGGGTTTCAATCATATTGTAAAAATTTCTAAAAATGTCTTTCACCTCAGATTTCTTTTCCATTAAGTACACATAAGATAGACGAGTATGGTCATCAATAAAAGTAACAAACCATTTTTTCCCACTATGAGTCCTAATTTTAGAAGCACCCCAAACATCACTATGAACTAAATAAAAAGGTTTGGAAGCTTTGTAAGGTTTAGGTAAATACGTGGAACGATGATTTTTTGCTAAAACGCAACTTTCACAATTAAATGAGGTGCAATCAAATCCCTTAAATAAATTTGGAAATAAATGTTTGAGATAAGGAAAACTATGATGTCCTAACCTAAGATGCCAAAGCATAATTTGTTCTTTACCAGAAAAAGAACTAATACTACTGAAACCCTGAGTTATTTTATTACTAAAAGAACCTTCATCAAAGTAGTAAAGGCCATCAAGCATCCTAGCACTCCCAATCATCTTCTCCGATTCCTGATCTTGAAGAATACAGTGAGATTCAAAGAATATAACACGACAATTAGAATCTCTAGAAAGTTTGCTGACAGATAAAAGAATACAAGCTAGTTTTGGAACATGTATGACAGATTGTAAAGAAATGTTTGCAGTCAATTTAATAGTTCCTTTTCCTGCAATGGAAGAAAAACTGCCATCTGCAATTCGATTTTTTTCATTAGAATAGGAAGGAGTGAGTTAAAAAAGTGAGAGGTACTAGTCATATGGTCAGAAGCTCTGGAATCGATAATCCACGGAGAAGAAGTGCCACAAGAGAAGAATTGAGGATAATTACCTGGTTTTGTAAATTGTGAGGTCTCCACTTACCTTTTCAATGTGGGATCCTCAACATGCCCCCTCAAGATGGTGCCTTTTTTGGGTTCATCATTCTTGAATCAGATCCATTTTTTTTTCTTGGACCGAATACCCGTTTGGATTTAATGGGCTTTGATACCATCTTAAATTTAGGAGAATGATTCTTTGTTATTCAAATATGTGCAACCCAGGTCTTCTTATATAGGAGAAAGACCCACTACAATATTAGGAAAGAATAAAACCAATAATGACTAAATATTGACAAATAATATTTACACAATTGTAAAGACTAGAAATTCCAATATTTCAAAAAAAAAAAAAAAAAGACTAGAAATTCCAACATAATGATATCTTGAAATGCTTACATGCCTCAGTGTACTAAAAAAACTACATACATGGCATCTCAATTCTCACATTACTCAAAATATGCATCTTCTTTCTTAATTTCTTTTGATGTAATTCATTACGTCAATGAAATTGCTTCCCATAAAATAATAATAAAAATAAAATCTTCTGATTGACATTAAATTGATATATTAGGTTATGGCATCTCATGTGACCCAAATTAGGTTATGTGAATGTCATGTTAGCAATTTAACTAAATGGACCATTGCATAAAACCTTTTATGGTCCCAAACCAAAACTATTTTTAAATATTGAGTTGTATAATAGAAGTTTGAAATTGCTAAGTGTATTGAGGAATATTGGTTGCTTGTTTTGCCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTAAATAGAAAATCGACATGAATTTAAAACTAGGCCGTTAGGCTAGTTTGACTCCTTTTGGGATGTCTTTATAGACTTGTCTTTCGGTTTTGGTTCTCTAGCTTTTGCAAGCCCTCTTGTCTTCTTTCATTTTTTCAATTAAAAAACATTTTTCCATCATCATCATCCTTTTCTTCCTCTTTGTTTTGAGAAAAAAATTTTGGTTTTAGAAACTTTAAACTCTAAAGCTGATCAAAATTATCATAGCTGCAAATAAAAATATTTAGGCTAAATAACCAAATGGTCCCTAATTTTTTAGGTAATTTTCGATTTGATCCATCTTCTAAAATTCTGTATTCAGTCAGTTGAAGCTAACTTTGTTCTAATATTTTAATTGTTATTCCATTCATTTTTATTATTTAGAGTAACCATCGTGAATAGTTTACTTTGACAATCTGCAGGAGGGAAATTACATGGTTGGATGTTTGGGCTTTCCTCAGGTGTGATCATTTTCCATGATGGGTGCCGCTTATTATAAATAGCATGTTGGTATTTTAATGTTGCATGATGAATTAGAAATTTGATTGTTATTTTGTGCATCCCACCATCCCTTTCCTTCTTTTTGACACACACCCACACCACAAATACATGCGTTAGTTATTTTCTTAATCTAAAATTGATATCTTACAGTCAAGAAGTCCCTTAAGCCAAGCAGTAGTAGCTCTGTTAATTGAATGTCTTTGTGTTTAGATTCTTTTTTTTTTCCACATTATGTATGTGTTTTTGGTTGCTTCTATTTTAGAGCAGTCGATTTATATTTCCATCTTACAGAAGATTTTACTTTCGAATAAAGCTTAAAGATGGTAAAGGCTCCTAAATTACATGCATTACTAGAATATGTGCTGCTAGAAGGTACACATAACTAGAGGGCTCGTACTACTATCGTTACCAACACTTATTTCAAATGTTCAAGAGGCATTGGCGCACATGTCTTAGGGAACTTTATGCCAAAATCTCAATTTTCCCTTTACATCAAATTCAAAAAAGGTTGGAACATTTTCAATGCTAATTCACAGAGATGTTCTTGGAGTTATTTTAGAATGGAACTGCAATGTCAAAGAGGCCTTATGTTTCATCCCAAAGAAAGTTGACGCTACTAATGCTTCCGAGTATTGTCACATCAGTGCAGTCTTTTTTTTTTTTTTTTTTTTGATATCCATGAGTGTCCGGGCCAGCTTACGCGCACCTCGACTAATCTCACGGGACAACCGCCTGACCCTACTACATTTGGTTGCCAAGGAAACTCGTAGGATATTAAATCCTAGGTAGTTGACCACCATGGATTGAAACATCAGTGCAGTCTTATAAAATTATGGTTAAAGGCATTCTTGGAAGGTCAAATAAGTTCTCTTGCATGGTATTTTTTACCACCAATCAACTTTTGCAAATTGCTAGATTGCTGATTTTTTTATTTTTTATTTTATTTTTATTTTTTTATCACACCCAATTGCTAGATTGCCGATTGATGAAGAATGGGTGAATGGAGATGTAAGAAGATGATATTCGATCATGTATATAATTTGTGTATTACAATAAATTTCATAGTTATTGATTATGAGGCTTATGTGCCATTGTAAGCTTTTGACATCAACCCCATGCTTTGGTACGTGAGAGAGTGTATATGGCAAAAATCTCTTCCAGTCTTCATGCTTTGACTTACTTGCTTGTCCTTGTTCTATCTAATATCCTCAGCTCACTTAGAATTTGTATGTTCATGCAATTGTTATCAAGTGGGTCAGCTTTCCTGGTTTGTATTCTTGTCTAGATCTGATTTTGTAGTGTTGTGCCTTCAATCGAGTTTAATATTATGCATTCTGTTCAGATTTCGATAATATGGCTGAAAAGAAGCCTGTTGTCATGTCCAATTTCTCTTGATGTAAAAAAACCAATAAAATAACTTAATGAAGCTAACTATTACAATTGGCTCCAGTGTTTTGTAAAGTGTGCCTCCTACGCCTACTGAAGACACCTTGTTTCTTCTCACTAAAGCATGTGCTGTACTCAGTTTTTGATTTTAGTTTTTTTTTTTTATTATTATTTTTCAGTAAAGAGATTAAGAAACTTGGAAGTTTCCTATATTCAGATTATTATGTGGTTTTCATGCGTGCATGCATAACACATTAATTTTTAACTTGCAAGCTTGTTCTAGTTAACACTTGTATTGAATACATAGTTCCAACGTGTTATGAGTGCCAAATCATTTTTAATGAGAAAATATATTGATTGTTGTGTTTACAGCTACCATTACCCCTGTTTGTGTTGGATAGTTATTTGACGTTATATTATCTACAAATTTCCAGTGTAGAAATGTCGTCTGGCTCCCTGGATCCATTGCAGAAGCTGCAGTAACCTCTAATTGTTGCAACTCATGCACTCCAGGTTTGTCTTTGCCTAGCTTCATTTTCACTTCTGTATTTTTCCTAAAAGGATCAGAAATCAAATAACCCTAGTTTAAAAATCATTACATGTTTGCATCTATGGTTGGATTGGAGGCCTTGTTAGAAAATGAATGACAAAGTTATGTGCGACCACATTGCACATATGACATGTCAGATTCCAATTTTTTAACGTAAAAGATATATAGAACCAGAAAATGAGTTTTGTTTTAGGATATTACATGATGCTGTTATATTAATTGTCTTTGCCAGGCTGTTTTACAAAATTATATGTTCTTGTACTGTCATTTATATGTCTAATGTTCATGTCCTATCCAAAGTTATTAGCTAGAGTTGCCATTACTTTGAGAATTAATTAATGTCCTTTTCTATTTTCTGATAGCGTGGCCAACAACCAGTACTGTTTCTATGATTTTTCTCTGTAGAGTTCGGAAATAATGTATTTCTTCTATTTTCTGAAAAATTTTCAAATAGGTCCTGTTTACTTGATCCAGTTTAAGTTTCGTCAGCTGGAAATACCACCAAACTACAATGCTAACCACTTAGGTACGTACTACTCTTGTAATCATGAGACGTCATTTGAAGTTTTGTTAAGCATCAGCTGTGTTGTCGTTCTGATATAATAATTTTGTACTGCAAATATTTTTGAGGTTATCTTTTTACCTGCACTATGGATATCACATGGGAGTTGCGCAGCTATTCATATATGCGTTAAGAGATTGCATGTCTATTCTCCCGTGAAAATGATGAAAGATATGTGTATGCCTTTTTCTGCTTTACATATTAAGCTTGAAGAATCTAAATATTTTTTATTCTTGTTCATGCTTTATCATTGTCAAGAAAGGACAGCTACTATTATGGAGAATCAGTCGATCTGGTTAACACGGAGTTGTTAAGACTAGAACATCTTTACGTGCTTTGAGTTCTGCAATAAATACAACTTTTGTAATTCACTCGGTTGTAATGTTAGTGCAGCCTAAAATTATCACTCTTGTTAACAACCAGAGAATGAAAGATAATATGTAGTTTGTCTTGTTCAATAGAAGAATGCAACCCTAAATCGTATAGGTTTCATTGATTACATAAGAGCTTAGAAAGAATAGGAAGTAATTATACTGTATACAGACACAGAAACTCAATTGCACTAGTTTACACAGATTAAAAGTAAAAGAAAGAAAAACCACCTCAGGTTAATCTCATAGTCAGTAAATAATAAAGAACTTAGAGGGAATAGGTTCAACTCATGGCGGTCAGCTACTTAGGATTTAATATCCCAGTTACCTTGGCAACCAAATGTAGTAGGGTCAAATTATTGTCTCGTGAGAATAGTTGAGGGTCGTGTAAGCTAGCTTAGACACTCATGAATTAGAAAAAAATAGTAAAGAAAGAAAATGAATAAGGGCCTAATTAGCCAGCAAAGAATGATGTAACTGCCAATCTCCTGGTTAATCTGAACATAGCTTAACTAGTTAAGAAAATTGGTGTAGCTTATTTATAAGATTCTTGTTGTAAGGGTAGTTTAGTCCAAACATGTAGTTCTTGCCACAGTCTTCCATTACTATCATCACCCGGGCGTTCTTGCTGTGTTCTACCCAAATTAGGCTATGCAATTGGATTGGGGTTTTGTTGTACATTTGAGCTGCCCATCTTTTCATAGATCATTTCCAAAATTTTCTTGATCTCACCCACATCGTTCTTCATATCTTGTTCAACTGGCAACAAGCGTACGGTCATCGGTCGTGGTGAGAGGACGGTGGTAAGCTCCGCCTCTTTTCCAACCGAAGATGAGTCTCCCACAACATTGTAAGAAACTCTCTTGGTTGCCATAAAAAAAAAGAGCCCAAAACCTTTGGTTGCTTCTCTGATACCAAATATGGTGTAGCCACCAGGAAGGAAATTGATGAAAAATACGCTGCTTGCCTTTCTTATTGATCAACAAGCCTTTAAATAGGCTTCCACAAATACAAGAGTAATGCTAACAAAGGGGGTGTGCTACACACATGAGGGTTTTAATTAAAAGAACTACATGTTCTGACTAAACTACCCTTACAACAAGAATCTTATAAATAAGCTACACCAGACATTATACATTTGGCCTAAAAGTTTGATCTTTGAGCCTCACCCCATTGTTGGGATTGTGGAGCAAAATTAGTTAGAAGATTGAAGAGGACATCGTTGACATGTTGTTGAAGAGCATTGCGACACTGTCGCAAGTGACGGAAAGAAGCTCGCTATAAAAGTCATTGCATTGAGACATTGGGAGTAGTGCCTTGATTCTAGGAGTGGTGTTTCAATGCTTCCGCAAACAGCTCCCAATCGCCGCACACAAGCTTGTTCAATGCTGCATGTGTAGCATTGTGATGCTACATCGTCTTTGTATAAAATCCCCTTGGTTTTTTAGGGTTTTCTTTGTGAAGGTGAAAATGATTACTTGTGTGCGGCAGTGGGTGAGGAAAGTTCTATAGAACTTGTTGATAGCCAATCCTAGTTGGGTTTTGAGGGTTTATTCTTTGTTTATCCTATGCATTCATTGTTGTGGCGCTTACTACTTAGAGGTCAAGGTAGCGTGAGGTAAGGGTCATTTGTAATCTCCACAGTAGAATCTGCACTTGCAGAAAACTAGACGTAGTCCCAAGTTTGGAACAAATCAATATATTTCTGGTGTTGTTTTCTCTTTTTCAACTCTATTTAGTTTATTGTTATTATTGACTTGATTTGTTGTGCTTGTGGAAGGGGAGATTTATCTATACACTATTACTGTCTTGTTGGATTGCTCTATGTAGTAGAAGTTTTAATATAGGGTTAACACCCCATACAATTGAACTAAAAAAACAGCTCTCCATGTTCAGAAATATCTCTTAAATATCAAAAGAGATTATGTTTACGAAGGGAAAGCAACCCATTTGTAGGAACTGCAATTAACCAATTAACCACTTACAGCATTTAGCTAACTCAGTAAAATGTAGTAATTGCACACAACAAGACAGTAGAATACCAAAGTAAATTATGATGTTTGAACTTTCTAACTTACCACGTCAAATTTGTTGTTATAATCTTGTTGCCATTTGGATAATATCATAAACATATTATTGATATTTGAGGAAAAGTGCAAGTGAGAGCCTACTCCATATATTTTCATAATATCAACGAAGGTTTGCAGGCCTACAAATATAAAGTACAATCAGCTAGACTAGGAAAGTACCCAGCTGTAAATAAAATAAAACAACCTGAAAAGGATAAAAATATTTTAGGAGCTAATTACACAAGTCGGTAGAAAATAAAACAATAAAGAAAAAAGAACAGCGGTGACTAATTAAAAAAAAATCTCGTAGATTACCCACTTTGGTATATTTTATCTATATTAGGAGAAGAATTGGCAGGTGGTTATGTTGATTAATGGCTACTTAACATACTCACTTTGGCCTTTCCCTTAAGTAGAACTTAACTCTTGTATTACCATTTATGGTACTATTCTTTTGTATAGTTTTTCCTTTTCTTCCCTTGATCTGTTTACCAAAATCTTGGTTCTTCGATTCTATGAACAGGATGTATAGGTGGTTGCGATGATATTCTTAGGCAATTGACAGAAATCTGTGGTACTGGATCCCGCATATCAGGCATGTATTTTTGCTGCCGTTATTTCAAAATATTTGAGGTGTGCAGTGTTGTAAATTATTTTCAAAGTTAGGGTAGTCTTGTAATTATCAAATCCTCTAGGTCTTTTAAATTTTGTATTGGGATAGTATTTTTCCTTTTCCTTTTAGGCTAGTAACAAATTGTTTTGTACTTATTCTGGTGTTTAGTTGAAATAAAAATATCTAAGAAACATTAGAAAACTACATGGCCAACTCTTAGCAAAGCTTTCTCTGAAGTAAGGCGAGAAGAAAGTAGGAAAAGTGTAATGATAGAAAAATCAAAGTCAGTCTCTACATTCTTGGAAACTTCTGCACTTGCTGCCTGCAGTTTTAACCCAACAATACCACGTGTGAGTATATATAGAGACGAGAGAGACCTTGGTGTGAACATTGCAAAATGGTAGGTCATATAAAAGACACATGTTGGAAGTCCAACAAAACCTTTTGATTGAAAACCTGGGGATCGCAATGATCATGATGATACAGCAAGCTAATGTAGCTTCTGATAAGGAAAATACTTGGCTACATACTGGTATGTAGAGATCTCCCTGCATACCACCATTAAAATGTTGATAATTAAGAGAGATAAAAAAGTTCTCATTTTCTATTTTTCTCTTAGTTGTCAAGATTTTAATGGGGTATGTAGGGAGATTCCTACATATCGGTATACAACCAAGTATTATTCTCCTGATAATTCTGTCACTTCAGAGCCAAATCCTTTTAGCGAAGAACAAATAGATGTACTACAAAAAATCATTAGTTATTGACGTGAGCGCGACAAAGCACGTCTCTCGTTGAGTGCAAGTATACACTATCAATTAATAAAGTGGAGAGTACTCCAGATATCGTACCCAAGGGAGATGGTGACTAGTTGAAAAACACTCGGTTCAATAAAACAAGAACCTCCTCTAGTTTGCAACCGTTGATGGTAACCAAAGAAATAATTTGATGATTTTTGTAATTGAAGACAGAAAGATAAAAAAAAGCAAGTAAATATAAGCGATTAAAGATATATGAGATCAACGAGGAATTCAAATAAGTTTCAACCAATAGCATTAAAATGTGCTCACCTTTGTGCTAGCAACTCACTAAGGCACTAGGGGTGTTCATCGGTCGGTCGGCATCGGTTTTGAGCTCAAACCGACGCCGAAAACCGACAGATCGGTTTATGTCGGTCGGTGATACTCGGTTTTAGGTGGGTTTGTAGCGCCAACCGACCGATTAGTCGGACGGTCGGTCGATATTAGTCGGTTTGAGACGCATGAGACTGAGGGAGAGTGGTTGGAGAAGAGAGTAAGAAAAAAAGGGAAAAGAATCCATGGCGGAGGTGTGAGAAGAAGAAGAAGAAGAAAGAATGGAAAAAGAGAAGAGAGAAATGAAGAAATAAAGAAGACTTTTCAAAAAATAAATAAATAAAGAAGAAAACAGAAATACAAGGTAGAGAGAAATGAGTGAAAAAAAACAGAGGAAATAAAAAGATAAGAAATGGAGGAGAAAAACGGAAGAACGAGATTCGGAGAAGATGAAGAAATGAAAGAGAGAAGAAACGAAATGAACAAAAAAACAAAGAAAGAAAGTAGAGAAAAAAAATCGGATGAGAAGAGTGAGAGAGAGAAAAGAAGTAGAAAAGATGATTTGACTTGAAGTAATAATTACTTTCTATTTTTTTAATAATAAACAAGCCAAAACCACCTTGGAGAAAGTAAATAGTTGATGGTTTTCAAGGTGGTTTTACAAATTTGAAATTTCCAACGGGCTTTTAAAGTTTCAAGCGGGCTTTTAAAATTTTCAGCAGGTTTTTAATTGAGTTCGGTCGGTCGGTCGGTTTTTGAGTTTTTAAATTGTACCGACCGACCGACGGTCGATTTTTTTTAAAATATTAAACCGACTCCGACCGAACCATTTATCAAACCGACCAACCGACGTCGGTTCGGTCGGTTTTGGTCGGTCGGATCGGTTTTCGGTTTGATTTTGAACACCCCTATCAGGCACTGCATACAACTGGAGAATACTATCTTTAAGTGCCCACATAGACATGGTGCAGATAGGTTGCTACCAGTTTGCACCCGCAAATACCCTGACAACTAGATTGTGAATTAAGTCCTACTCCTATTTAGCTCCGTTGTAGGTGCCTTTAAAAGACTAAGCCAACTAGACATCTATTTCTAAGGCTAGCTGAAACTTAGATAATTATTGCACACGACTCCCAAAACTCTAGTGGTTCCAATCCTATTTCTAGGATGCAAGAAAACAAAGTCCTATTTCTAGGATCTTTTCCACTATTGTTTTTGTGAACCCGTGCATTCAACTACAACCTTTCAGCCACTAGCTGAACACAAACTATGCTAACTTAAGTGATCAGTTTAAGCTAACAATGAAACTTAAATTTTCAGCAAAAACAAACAATGCTAAAAGGAAGCAAGGTTGCCTTTGCATTGGTGGGGCTTTCTTCTACTCAAGGAATCCACATATTTGAACCCCCGAGAAGAAGCTTAGCTCATTGAGGAAATTAAAATGCAAGACATAAAGTAAAAAACACACAGAGTAAAGAAACAACTTGAATTCATATTGATAATTGAAAAGAGTACATAAAATAAAGAACTTACAACTGAAAATTAAATTAAAACAGAAAGTACAACAACTTACAAAAGAGAATAAACAGAAAGTAAAGACTCTTGACTCAACTAAAAGTTCTTTCTCCTCTCTATCTAATTTGCTCTTAACCTTTTTCAAGGGGAGACAGGTCTTTCTCTTATCCTCCTTTCGAATGGAAGAGCCGACAGAGGCTAGAAGAACCGAAACTCGGAGTGGTTACAAGATGAGAAGAGAGAAAAGCAATAAAACTATCCTAAGGACGAAAATCTAAACTCCTCTTGCTTCTTGCACCTTGGTCGCCTTATATAGACCTTAGAAGGTAGGGTTGACTGTCGAGATCAGTGTGAGAGGACTCTTGAAGGTAAAAATCCACGATCCTTTGAGATTTGATAAGAGATTTGAGATTTTCAGATGATTTTGTGAAGATCGCGCGAATCTCGGAATTCTGTCGGAAAGCCCAGTTGCGGCCGCAATTCGGATGCAAATTCCTCTGTGCACTACCTTGACAAATCTGTCTTCAGCTGGGGCTACTTTCCTTATTAGTTTGCGGGCATAATTCAAACGCAAATTCCACATCTTCAGGACCAAATGTGGGCGCAAATCTTCAACTTCGAACTTTTGCTCCGCTAACTCTATCTCCATTTGTGGGCGCATTTCCACAACAATTTGTCCTCTGCACAAAAACATTAACTTAGATAAATTCTTATAAAAGTAATCTCTTTTTGGACATTTTAAGCATAAGTTCTATATTTCTAAGATTTTCAACATGATTCTATGACTTTTGCTAATTTGACTCTAAAAGGTATGATTTTAAGCACAAAGTTCTTGCTTTCCTAGCAATAACCTAAGTTTTTAAGGTTAAATAACGCACATAAATGAGCATTATCAAATACACAATGCAGGGAGCAAGGTTGGTTGCACAAAAAATTGTGCCTACTGCCTAAACAACTAGTAAAGGAGGGATGCAACCTAGATTGTAGATACGGAAGAAAAGCTGTACAAGATGAGATTGACGCACTTAAGAAAAGTGATACATGACAGTGGCAGATCTACCTAGTGGAAAACGAACTGTTGGATGTAAGTTTTTTTTACAGTAAAACATAAGGCAGATGAGAACATTGAAAGATTGGGCCAGACCTTTTGCTAGAGGATTCACTCAGTCTTATGGAATTGGCTACCAAGTAACATTTGCAACGGTTGCTAAACTCAACACCATAAGAATTATCTTACCTCTCGCAGCTAATCTTGATTGGGGTCTTCAACAATTAGATATTAAAAATGTTTCTTTGAATGGAGATTTGGAAGTATACATGGATATTCCTCCTGGATATAAGGAGAAATTTGATCCAACAAAGGTTTGCAAGTTGAAGAAACCTCTCTGTGGACTTGAGCAATCTCCTTGTGTTTGGTTTGGTAGATTTGCAACTTTTGTTCTCAATCTTGGTATTCACAATGTCAGTTAGACCATACTCTATCAAAAGGTTTGGAAAATTTATTTGCCCTCTTAATAGTATATGTTGATGATGTTATTATTTATGAGAACGATGAATTAGAATTGCAAATGTTAAAAAAACACTTGGCTCAAGAGTTCGAACTCAAGGATCTAGGAAATCTCAAATATTTTCTAGGTATGGAAGTTGCTTGGTCGTAAAAGGGTATAATTGTATTCCAAAGGAAGTATGCGTTGGATCTTCTCAAAGAAATTGACATGTTAGGATGCAAACCAACAGAATCTCCTATGGACCCACAAAATAAACTTGGGCTCAACCATGATAGCACACCTGTGGATAGGGGGAGATACCGACGTCTTGTAAGGCATCTTATCTATCTTTTCCATACACATTCAGGTATTGGATTGGCTGTCAGCACGGTTAGTTGCATAATCCTAATGATGAACATATGGAAGCTTTATATCAAATCCTATGATATCTAAAGATGACTTCTTAAAAAGGATTTTTTTTTCGAAAACTAACCAGAGAAACATTGAAGTATGTCTGATGCAGATTGGGTTGGTGATGTTATAGATAGAAGATCTACCTTAGGTTACTGCTCCTTTGTATGGGGTAATCTTGTAACATAGAGAAGCAAAAAGCAGTCTGGTTGCAAGAAGTAGTGCAACAACTGAATTCTGAGCACTCGTTCATGTTCATGGCATGTGTGAAGGTAATATGGATCAAGAGAGTCCTAAGTGAATTAGGAAAACACTATTCATCACAAATATAGATGACATGTGACAATCAAGCTACCATAAGCATGGCAAAGAATCCAACACCATGATAGGACAAAACATGTTGAAATAGATCAATACTTTATCTTAAAAAAAGTCAATAATGAAGTAGTTCAACTCAACTATGTGCCTAGAAAACAACAATTAGCAGGTATCCTTACCAAACCTTTACCAAGGCCTAACTTTGAATATCTAAATAGAAAATTGGGATTGTATAATATTTACAACCCATCTTGAGGGGACTGTTGTAAATTATTTTCAAAATCAGGGCGGTCTTGTAATTATCAATTTAGGATTTATCATTTTCTTGGTCTTTTTAATTTTGTATTAGGACAATATTTTTCCTTTTCCTTTTAGGAGAGTAACAAATTATTTTGTATTCATTATGGTGTTTAGTTGAAATAAAATTATAGAAGAAATATTAGAAAATTACATGCAGGTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTTAATTATTATTATTATTTTGGAGTCTAGGATCAAAGAAACGGTATGAACTTGTATCATTATAAGCTTATTGCTAATAAATTGTCTACATTTATGTTGGAATTTCCGGTCTTTACAATTGTGTAAATATTAATTGTCAATATTTAGACATTATTGCTTTTATTCTTTCCTTATATTGGTTGCACATATTTGAATAACAAACCATTATTCTCCTAAATTTAAGAATTTACTATTTCATTAAGATGTTCAGGGATATGTATGGTTGTTCAAAGTGTCTTCTTTGTCGCATTTAAGCTAGAGAGTAATTTACCATCCAATCCTCTTCCTCCCCATACCCCGTTTTTACCTTGTCAAGTTTTGGGGGTAAAAACAACGGGTTATTGAATGTTGAATGCTGTTGATTGCGAAATCTAAGTAAGATGTGTATATTTATAAATTGGATTTTGAACTTGGGACAACCTCTCCTCCTTTAAGAAGAAGTATCGATCAATAGTCTCATTACGACATTAACCTGTTCGATAAAAGCATGATTTAGAAGGGAAATAATCCACATGACCCAAGAAATAAAAACAAAAAATCCTTTTGCAGATTTATATGATTTCAGCATCAAAGAAACACTCTTCTGTTTACTTTTCCTCCCATTTTACTTTTTGCACATTCAAATTATGTTTTCCAGCTAGAGGTCGAGGGACTTCATCATCCAGTGTGCAGCGAGGTAACACTGGGCAAAGTGTATGCATTTTCTGCCAACAAGTAGGCCATTCCTCAAATGATTGCCCATCCCAGGTTGTAGGTTCTAGAAGTGCTCGTCGTCGGCAAAGTGGTAAACGAGATTTTCGGTTGTCTATCATTATAAATAAACAGTTGATATATTTTAAATATTTTTTAGTGGCTTTTATATTTATTTTCTAGTATGGGTGTGTTCCAATGCTATTGTCAAATGCATACTTTTTCTTTGGGTCGTTTGCATATCCACAAGCTCACAGTTCATGAAGAAATTGATTTACCTTTTTTCTTTTTATTGTAATCGTGTTATTTTTGTGAAAGGGATCTAAGATGTTAGTCATCTACGAAAAGTTTGAACTTCTGAAATTGTGGATCATGTTTGCATGCTTTCAGATTCCTTTTGTTGCTGTTGATAAATTTCAAACCAAAAGATTATTATTTATTTATTTATTTTAATTTTAAAAATCTTGTTTTATGTTTTGTTAGCAGGTGAATCTTCAGTTTCGTGTAGTAACTGTGGCACACCGTGTGTCTTACGGACTGCAAATACTGCCAATAATAGGGGAAGAAAGTTCTACAAATGTCAATCTCAGGAGTGCAATTTCTTCGTGTACGCAGTCCCCTTTAAGTTTGTTTTGATCTCTTAGAATTTTTTTTTTTAATTGTTAACATGAAAACTCAAGGATTTGACAATAATTATAATCTACCATGATATTAGAATCAAAACTTCAATGTTTACATTTACTTATTCCATTTCCTTCTCGGAAAAAAACTGTTCATGCATAGATCCTATCTAATAATATAAATTAAAAACTTATATGACTCAACCAAATAGCTCAAAATTTTATTCTACCTTACTCTTGTACCCCAAAGAGGAAAAAACAATGTGGTATTGAACCCTTTTCAAAGTATTGTCGTTGCTTCACTTGAAATAGCAATGCTGAACTTTGGTTTGGCAATACCATAGTTCTGTTCGATAAGGAGAACATGTTTCATAGTAACTTAATTCCTTAGATTCCAATTCAAAATGTTGATATTGATTAAATACCTCTCTTGTTAACATAAATGTAAATAATGCATCCTTTTGCAGATGGGAAGATAACGTAGACAATGGCAATGCAGGAAATAGTGCTCCACGGTCAAATATCAGGAGCTCAGGCTCAGCAGCTTCTAATCCTAACCCTGGTCGAAACACTGTTCGTGGTCGTGGCCGTGGCCGTGGTCAGATTGCAGCAACATTCGTGTCAGCAACTGGTGAGCCAATATCTGATAGAAGATGTTTTGTTTGTGGCGATCCATCACACTTCGCAAATGTTTGCCCAAACCGTGGTGCTTGA

mRNA sequence

ATGCTGTGCCTTCTTTTTTCCCTTCCCTCCATAAAAGCTTGGAAATATTTGCAGGCAAGGTTGAATAAGCTAAAACTTCTTGAAGCCATGGGGGTTTTCTTTGAGAGATCTCATGGTTCTGGTGGGGATGAAAATCATGCAGCAGCTAGAGAGGTTGTTCGACGATGTGGACTGTGTCAGGACTCAGATATGGTGCTTAAAAGAAACAGGGAGGGAAATTACATGGTTGGATGTTTGGGCTTTCCTCAGTGTAGAAATGTCGTCTGGCTCCCTGGATCCATTGCAGAAGCTGCAGTAACCTCTAATTGTTGCAACTCATGCACTCCAGGTCCTGTTTACTTGATCCAGTTTAAGTTTCGTCAGCTGGAAATACCACCAAACTACAATGCTAACCACTTAGGATGTATAGGTGGTTGCGATGATATTCTTAGGCAATTGACAGAAATCTGTGGTACTGGATCCCGCATATCAGCTAGAGGTCGAGGGACTTCATCATCCAGTGTGCAGCGAGGTAACACTGGGCAAAGTGTATGCATTTTCTGCCAACAAGTAGGCCATTCCTCAAATGATTGCCCATCCCAGGTTGTAGGTTCTAGAAGTGCTCGTCGTCGGCAAAGTGGTGAATCTTCAGTTTCGTGTAGTAACTGTGGCACACCGTGTGTCTTACGGACTGCAAATACTGCCAATAATAGGGGAAGAAAGTTCTACAAATGTCAATCTCAGGAGTGCAATTTCTTCGTATGGGAAGATAACGTAGACAATGGCAATGCAGGAAATAGTGCTCCACGGTCAAATATCAGGAGCTCAGGCTCAGCAGCTTCTAATCCTAACCCTGGTCGAAACACTGTTCGTGGTCGTGGCCGTGGCCGTGGTCAGATTGCAGCAACATTCGTGTCAGCAACTGGTGAGCCAATATCTGATAGAAGATGTTTTGTTTGTGGCGATCCATCACACTTCGCAAATGTTTGCCCAAACCGTGGTGCTTGA

Coding sequence (CDS)

ATGCTGTGCCTTCTTTTTTCCCTTCCCTCCATAAAAGCTTGGAAATATTTGCAGGCAAGGTTGAATAAGCTAAAACTTCTTGAAGCCATGGGGGTTTTCTTTGAGAGATCTCATGGTTCTGGTGGGGATGAAAATCATGCAGCAGCTAGAGAGGTTGTTCGACGATGTGGACTGTGTCAGGACTCAGATATGGTGCTTAAAAGAAACAGGGAGGGAAATTACATGGTTGGATGTTTGGGCTTTCCTCAGTGTAGAAATGTCGTCTGGCTCCCTGGATCCATTGCAGAAGCTGCAGTAACCTCTAATTGTTGCAACTCATGCACTCCAGGTCCTGTTTACTTGATCCAGTTTAAGTTTCGTCAGCTGGAAATACCACCAAACTACAATGCTAACCACTTAGGATGTATAGGTGGTTGCGATGATATTCTTAGGCAATTGACAGAAATCTGTGGTACTGGATCCCGCATATCAGCTAGAGGTCGAGGGACTTCATCATCCAGTGTGCAGCGAGGTAACACTGGGCAAAGTGTATGCATTTTCTGCCAACAAGTAGGCCATTCCTCAAATGATTGCCCATCCCAGGTTGTAGGTTCTAGAAGTGCTCGTCGTCGGCAAAGTGGTGAATCTTCAGTTTCGTGTAGTAACTGTGGCACACCGTGTGTCTTACGGACTGCAAATACTGCCAATAATAGGGGAAGAAAGTTCTACAAATGTCAATCTCAGGAGTGCAATTTCTTCGTATGGGAAGATAACGTAGACAATGGCAATGCAGGAAATAGTGCTCCACGGTCAAATATCAGGAGCTCAGGCTCAGCAGCTTCTAATCCTAACCCTGGTCGAAACACTGTTCGTGGTCGTGGCCGTGGCCGTGGTCAGATTGCAGCAACATTCGTGTCAGCAACTGGTGAGCCAATATCTGATAGAAGATGTTTTGTTTGTGGCGATCCATCACACTTCGCAAATGTTTGCCCAAACCGTGGTGCTTGA

Protein sequence

MLCLLFSLPSIKAWKYLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYMVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGCIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGDPSHFANVCPNRGA

Homology

[Close]

BLAST of Lag0026521 vs. NCBI nr
Match: XP_022154286.1 (DNA topoisomerase 3-alpha [Momordica charantia])

HSP 1 Score: 582.8 bits (1501), Expect = 1.9e-162
Identity = 281/314 (89.49%), Postives = 291/314 (92.68%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L ARLNKLKLLEAM VFFERS+GSGGDE+H     VVRRCGLCQDSDMVLKRNR+GNYM
Sbjct: 601 FLDARLNKLKLLEAMEVFFERSNGSGGDEHHTVG-VVVRRCGLCQDSDMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVT +CCNSCTPGPVYLIQFKFR LEIPPNYNANHLGC
Sbjct: 661 VGCLGFPQCRNVVWLPGSIAEAAVTFDCCNSCTPGPVYLIQFKFRPLEIPPNYNANHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQ 195
           IGGCDDILRQLTEICGTGSR+S RGRG TSSSS QRGNTGQ VCI CQQVGHSSNDCPSQ
Sbjct: 721 IGGCDDILRQLTEICGTGSRMSGRGRGVTSSSSAQRGNTGQGVCIHCQQVGHSSNDCPSQ 780

Query: 196 VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDN 255
           VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFY CQSQ+CNFFVWEDN+D+
Sbjct: 781 VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYSCQSQDCNFFVWEDNIDS 840

Query: 256 GNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG 315
           GN GNSAPRSNIR S S ASNPNPG+NT  GRGRGRG IA TFVSATGEPISDRRCFVCG
Sbjct: 841 GNGGNSAPRSNIRGSASVASNPNPGQNTGHGRGRGRGNIAMTFVSATGEPISDRRCFVCG 900

Query: 316 DPSHFANVCPNRGA 329
           DPSHFANVCPNRGA
Sbjct: 901 DPSHFANVCPNRGA 913

[Close]

BLAST of Lag0026521 vs. NCBI nr
Match: XP_038904102.1 (DNA topoisomerase 3-alpha isoform X2 [Benincasa hispida])

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161
Identity = 281/313 (89.78%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYM
Sbjct: 576 FLDARVNKQKLLEAMEVFFERSNGSGGDENRAVG-EVVQRCGLCQDSNMVLKRNRDGNYM 635

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLIQFKFRQLEIPPNYNANHLGC
Sbjct: 636 VGCLAFPQCRNVVWLPGSIAEAAVTSDCCNLCTPGPVYLIQFKFRQLEIPPNYNANHLGC 695

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQV
Sbjct: 696 IGGCDDILRQLTEICGTGSRVSARGRGTSSSSVQRDNTRQSVCIFCQQVGHSSNDCPSQV 755

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSA RRQSGE SVSCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN 
Sbjct: 756 VGSRSAHRRQSGEYSVSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFVWEDNVDNS 815

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD 315
           N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Sbjct: 816 NGGNSASRSNIRTSGSAAPNPNPGRNTGRGRGRGWSRIAATFVSATGEPISDRRCFVCGD 875

Query: 316 PSHFANVCPNRGA 329
            SHFANVCPNRGA
Sbjct: 876 ASHFANVCPNRGA 887

[Close]

BLAST of Lag0026521 vs. NCBI nr
Match: XP_038904101.1 (DNA topoisomerase 3-alpha isoform X1 [Benincasa hispida])

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161
Identity = 281/313 (89.78%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYM
Sbjct: 601 FLDARVNKQKLLEAMEVFFERSNGSGGDENRAVG-EVVQRCGLCQDSNMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLIQFKFRQLEIPPNYNANHLGC
Sbjct: 661 VGCLAFPQCRNVVWLPGSIAEAAVTSDCCNLCTPGPVYLIQFKFRQLEIPPNYNANHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQV
Sbjct: 721 IGGCDDILRQLTEICGTGSRVSARGRGTSSSSVQRDNTRQSVCIFCQQVGHSSNDCPSQV 780

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSA RRQSGE SVSCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN 
Sbjct: 781 VGSRSAHRRQSGEYSVSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFVWEDNVDNS 840

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD 315
           N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Sbjct: 841 NGGNSASRSNIRTSGSAAPNPNPGRNTGRGRGRGWSRIAATFVSATGEPISDRRCFVCGD 900

Query: 316 PSHFANVCPNRGA 329
            SHFANVCPNRGA
Sbjct: 901 ASHFANVCPNRGA 912

[Close]

BLAST of Lag0026521 vs. NCBI nr
Match: XP_038904103.1 (DNA topoisomerase 3-alpha isoform X3 [Benincasa hispida] >XP_038904104.1 DNA topoisomerase 3-alpha isoform X3 [Benincasa hispida])

HSP 1 Score: 579.7 bits (1493), Expect = 1.6e-161
Identity = 281/313 (89.78%), Postives = 291/313 (92.97%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR+NK KLLEAM VFFERS+GSGGDEN A   EVV+RCGLCQDS+MVLKRNR+GNYM
Sbjct: 501 FLDARVNKQKLLEAMEVFFERSNGSGGDENRAVG-EVVQRCGLCQDSNMVLKRNRDGNYM 560

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCL FPQCRNVVWLPGSIAEAAVTS+CCN CTPGPVYLIQFKFRQLEIPPNYNANHLGC
Sbjct: 561 VGCLAFPQCRNVVWLPGSIAEAAVTSDCCNLCTPGPVYLIQFKFRQLEIPPNYNANHLGC 620

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSR+SARGRGTSSSSVQR NT QSVCIFCQQVGHSSNDCPSQV
Sbjct: 621 IGGCDDILRQLTEICGTGSRVSARGRGTSSSSVQRDNTRQSVCIFCQQVGHSSNDCPSQV 680

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSA RRQSGE SVSCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFFVWEDNVDN 
Sbjct: 681 VGSRSAHRRQSGEYSVSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFVWEDNVDNS 740

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCGD 315
           N GNSA RSNIR+SGSAA NPNPGRNT RGRGRG  +IAATFVSATGEPISDRRCFVCGD
Sbjct: 741 NGGNSASRSNIRTSGSAAPNPNPGRNTGRGRGRGWSRIAATFVSATGEPISDRRCFVCGD 800

Query: 316 PSHFANVCPNRGA 329
            SHFANVCPNRGA
Sbjct: 801 ASHFANVCPNRGA 812

[Close]

BLAST of Lag0026521 vs. NCBI nr
Match: XP_022934066.1 (DNA topoisomerase 3-alpha isoform X1 [Cucurbita moschata])

HSP 1 Score: 574.3 bits (1479), Expect = 6.6e-160
Identity = 281/317 (88.64%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYM
Sbjct: 601 FLDARFNKQKLFEAMEVFFERSNGSGGDENHAVG-EVVQRCRLCQDSDMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLIQFKFRQLEIPPNYN NHLGC
Sbjct: 661 VGCLGFPQCRNVVWLPGSIAEAAVTSNRCNSCTPGPVYLIQFKFRQLEIPPNYNPNHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQV
Sbjct: 721 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTAQSVCVFCQQLDHSSNDCPSQV 780

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSARRRQ+GESS SCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ 
Sbjct: 781 VGSRSARRRQTGESSFSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFAWEDSVDSV 840

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF 315
           N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Sbjct: 841 NGGNSAARSNIRSSGSAASNTNPGRNTGRGRGRGQGQGQGQIAATFVSAIGEPISDRRCF 900

Query: 316 VCGDPSHFANVCPNRGA 329
           VCGDPSHFANVCPNRGA
Sbjct: 901 VCGDPSHFANVCPNRGA 916

[Close]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot
Match: Q9LVP1 (DNA topoisomerase 3-alpha OS=Arabidopsis thaliana OX=3702 GN=TOP3A PE=1 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 3.4e-98
Identity = 186/327 (56.88%), Postives = 233/327 (71.25%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR+ K KLLEAM +FFERS+ +   E+  A  EVVRRC LC +SDM L++NR+GN+M
Sbjct: 603 FLDARVKKSKLLEAMTIFFERSNNTDESESQTAG-EVVRRCNLCNESDMALRKNRDGNFM 662

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGC+ +PQCRN VWLPG   EA+VT+N C SC PGPVY I FKFRQ+ IPP ++ NHLGC
Sbjct: 663 VGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNHLGC 722

Query: 136 IGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCP 195
           +GGCDDIL+QL +ICGTGSR  AR   GT+ S+++Q  NT QS VCI CQQ GH+S +CP
Sbjct: 723 VGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHASTNCP 782

Query: 196 SQVVGSRSAR----RRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVW 255
           S+V  SR++R      ++ ES+VSC+ CG+ CVLRTANT  NRGR+F+ C +Q C+FF W
Sbjct: 783 SRVPASRNSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAW 842

Query: 256 EDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS 315
           ED+++N ++GN+   SN  S GS       GR   RGRGR         GR     +FVS
Sbjct: 843 EDSINN-SSGNATTGSN--SGGS-------GRRGSRGRGRGGRGGQSSGGRRGSGTSFVS 902

Query: 316 ATGEPISDRRCFVCGDPSHFANVCPNR 327
           ATGEP+S  RCF CGDPSHFAN CPNR
Sbjct: 903 ATGEPVSGIRCFSCGDPSHFANACPNR 918

[Close]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot
Match: C7J0A2 (DNA topoisomerase 3-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=TOP3A PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.6e-78
Identity = 158/326 (48.47%), Postives = 204/326 (62.58%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK+KL +AMG FF RS     +  ++   E VR C  C +S+M LK+   G +M
Sbjct: 605 FLDARANKVKLFDAMGTFFARSSRPVNETQNSI--ETVRPCAACNESEMFLKQRPTGEFM 664

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGC GFPQCRNVVWLP S++ AAVT   C +C PGPVY IQFKFR+ +IPPN++ +HLGC
Sbjct: 665 VGCRGFPQCRNVVWLPRSLSGAAVTDQVCPTCAPGPVYKIQFKFRRRDIPPNFDVDHLGC 724

Query: 136 IGGCDDILRQLTEICGTGSR----ISARGRGTSSSSVQRGNTGQSV-CIFCQQVGHSSND 195
           IGGCDDIL++L E+   GS       AR +  ++S V++G++ Q +   F   V  ++  
Sbjct: 725 IGGCDDILKELMELSRFGSHSQTATPARNQSQTASGVRQGSSRQDLHTSFHPAVQFTNGQ 784

Query: 196 CP-SQVVGSRSARRRQSGESS--VSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFV 255
            P     G RS   + SG +S  V C++C  PCVLRTANT  NRGRKFYKCQ+  C FF 
Sbjct: 785 TPVVNPQGFRSTHTQSSGNASGQVQCTSCREPCVLRTANTEANRGRKFYKCQNLACGFFA 844

Query: 256 WEDNVDN------GNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSAT 315
           WED+V+N      G  G     S+ +SS SA++    G      RGRGR      FV+AT
Sbjct: 845 WEDDVENSAPRGRGGRGRGGRSSSRQSSASASAGRRGGTQGRGRRGRGRNADGMMFVAAT 904

Query: 316 GEPISDRRCFVCGDPSHFANVCPNRG 328
           GEP+    CF+CGDP+HFANVCPN G
Sbjct: 905 GEPVYG-SCFICGDPTHFANVCPNLG 927

[Close]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot
Match: Q13472 (DNA topoisomerase 3-alpha OS=Homo sapiens OX=9606 GN=TOP3A PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.9e-33
Identity = 99/317 (31.23%), Postives = 147/317 (46.37%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDEN-HAAAREVVRRCGLCQDSDMVLKRNREGNY 75
           +++A     KL EA+  +F         E+ + A  E +R+C  C + DMVLK  + G +
Sbjct: 617 FIEAVAKAKKLDEALAQYFGNGTELAQQEDIYPAMPEPIRKCPQC-NKDMVLKTKKNGGF 676

Query: 76  MVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLG 135
            + C+GFP+CR+ VWLP S+ EA+  S+ C  C P PVY ++ KF++  +PP      + 
Sbjct: 677 YLSCMGFPECRSAVWLPDSVLEASRDSSVCPVCQPHPVYRLKLKFKRGSLPPTMPLEFVC 736

Query: 136 CIGGCDDILRQLTEICGTGSRISA---RGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDC 195
           CIGGCDD LR++ ++  +G    A    GR  ++ S+ R +  Q       Q   S    
Sbjct: 737 CIGGCDDTLREILDLRFSGGPPRASQPSGRLQANQSLNRMDNSQH-----PQPADSRQTG 796

Query: 196 PSQVVGSRSARRRQSGESSVSCSNCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWED 255
            S+ +         +GES+    NCG   VL T      NRGR+F+KC    CNFF+W D
Sbjct: 797 SSKALAQTLPPPTAAGESNSVTCNCGQEAVLLTVRKEGPNRGRQFFKCNGGSCNFFLWAD 856

Query: 256 NVDNGNAGNSAPRSNIRSSGSAASNP-----------NPGRNTVRGRGRGRGQIAATFVS 315
           + + G  G   P    R  G++   P           NPG  +  G      Q + T   
Sbjct: 857 SPNPGAGG--PPALAYRPLGASLGCPPGPGIHLGGFGNPGDGSGSGTSCLCSQPSVTRTV 916

Query: 316 ATGEPISDRRCFVCGDP 317
               P   R+   C  P
Sbjct: 917 QKDGPNKGRQFHTCAKP 925

[Close]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot
Match: O70157 (DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.2e-31
Identity = 88/274 (32.12%), Postives = 139/274 (50.73%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFF-ERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNY 75
           +++A     KL EA+  +  ER+  +  +E + A  E VR+C  C + DMVLK  + G +
Sbjct: 617 FIEAVAKAKKLDEALSQYLGERTEMAQQEEIYPAMPEPVRKCPQC-NKDMVLKTKKSGGF 676

Query: 76  MVGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLG 135
            + C+GFP+CR+ VW P S+ EA+  ++ C+ C P PVY ++ KF++  +PP      +G
Sbjct: 677 YLSCMGFPECRSAVWFPDSVLEASRDNSVCSVCQPPPVYRLKLKFKRGSLPPAMPLEFVG 736

Query: 136 CIGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQ 195
           CIGGCD+ L+++  +    +   A        + Q  N   S      Q   + +  PS+
Sbjct: 737 CIGGCDETLKEIFGLRFPRALPRASQPSGHLQASQALNRMDSSQHNLSQPLVNRHTRPSK 796

Query: 196 VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTAN-NRGRKFYKCQSQECNFFVWEDNVD 255
            V         +GES+    NCG   VL T      N+GR FYKC + +CNFF+W D+  
Sbjct: 797 TVAQALLPPTTAGESNSVTCNCGREAVLLTVRKQGPNQGRHFYKCSNGDCNFFLWADS-- 856

Query: 256 NGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRG 288
           + + G   P S     GS+   P+   + + G G
Sbjct: 857 SHSTGGGTPTSASGPPGSSVGCPSSVGSHMDGFG 887

[Close]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot
Match: Q9NG98 (DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 6.1e-07
Identity = 25/74 (33.78%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 39  GSGGDENHAAAREVVRRCGLCQDSDMVL--KRNREGNYMVGCLGFPQCRNVVWLPGSIAE 98
           G+ G        + + +C  C ++ + L  K+N++G Y +GC  FP C+N VWLP    +
Sbjct: 641 GADGSAPSHGIIQSIFQCPKCNEAPLALKPKKNQQGWY-IGCNNFPDCKNAVWLPTECKD 700

Query: 99  AAVTSNCCNSCTPG 111
           A+V   CC +C  G
Sbjct: 701 ASVLDECCPTCGDG 713

[Close]

BLAST of Lag0026521 vs. ExPASy TrEMBL
Match: A0A6J1DNA0 (DNA topoisomerase OS=Momordica charantia OX=3673 GN=LOC111021577 PE=3 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 9.0e-163
Identity = 281/314 (89.49%), Postives = 291/314 (92.68%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L ARLNKLKLLEAM VFFERS+GSGGDE+H     VVRRCGLCQDSDMVLKRNR+GNYM
Sbjct: 601 FLDARLNKLKLLEAMEVFFERSNGSGGDEHHTVG-VVVRRCGLCQDSDMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVT +CCNSCTPGPVYLIQFKFR LEIPPNYNANHLGC
Sbjct: 661 VGCLGFPQCRNVVWLPGSIAEAAVTFDCCNSCTPGPVYLIQFKFRPLEIPPNYNANHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRG-TSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQ 195
           IGGCDDILRQLTEICGTGSR+S RGRG TSSSS QRGNTGQ VCI CQQVGHSSNDCPSQ
Sbjct: 721 IGGCDDILRQLTEICGTGSRMSGRGRGVTSSSSAQRGNTGQGVCIHCQQVGHSSNDCPSQ 780

Query: 196 VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDN 255
           VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFY CQSQ+CNFFVWEDN+D+
Sbjct: 781 VVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYSCQSQDCNFFVWEDNIDS 840

Query: 256 GNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGRGRGQIAATFVSATGEPISDRRCFVCG 315
           GN GNSAPRSNIR S S ASNPNPG+NT  GRGRGRG IA TFVSATGEPISDRRCFVCG
Sbjct: 841 GNGGNSAPRSNIRGSASVASNPNPGQNTGHGRGRGRGNIAMTFVSATGEPISDRRCFVCG 900

Query: 316 DPSHFANVCPNRGA 329
           DPSHFANVCPNRGA
Sbjct: 901 DPSHFANVCPNRGA 913

[Close]

BLAST of Lag0026521 vs. ExPASy TrEMBL
Match: A0A6J1F1M3 (DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111441350 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.2e-160
Identity = 281/317 (88.64%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYM
Sbjct: 585 FLDARFNKQKLFEAMEVFFERSNGSGGDENHAVG-EVVQRCRLCQDSDMVLKRNRDGNYM 644

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLIQFKFRQLEIPPNYN NHLGC
Sbjct: 645 VGCLGFPQCRNVVWLPGSIAEAAVTSNRCNSCTPGPVYLIQFKFRQLEIPPNYNPNHLGC 704

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQV
Sbjct: 705 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTAQSVCVFCQQLDHSSNDCPSQV 764

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSARRRQ+GESS SCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ 
Sbjct: 765 VGSRSARRRQTGESSFSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFAWEDSVDSV 824

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF 315
           N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Sbjct: 825 NGGNSAARSNIRSSGSAASNTNPGRNTGRGRGRGQGQGQGQIAATFVSAIGEPISDRRCF 884

Query: 316 VCGDPSHFANVCPNRGA 329
           VCGDPSHFANVCPNRGA
Sbjct: 885 VCGDPSHFANVCPNRGA 900

[Close]

BLAST of Lag0026521 vs. ExPASy TrEMBL
Match: A0A6J1F0T9 (DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111441350 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.2e-160
Identity = 281/317 (88.64%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYM
Sbjct: 601 FLDARFNKQKLFEAMEVFFERSNGSGGDENHAVG-EVVQRCRLCQDSDMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLIQFKFRQLEIPPNYN NHLGC
Sbjct: 661 VGCLGFPQCRNVVWLPGSIAEAAVTSNRCNSCTPGPVYLIQFKFRQLEIPPNYNPNHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQV
Sbjct: 721 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTAQSVCVFCQQLDHSSNDCPSQV 780

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSARRRQ+GESS SCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ 
Sbjct: 781 VGSRSARRRQTGESSFSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFAWEDSVDSV 840

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR----GRGQIAATFVSATGEPISDRRCF 315
           N GNSA RSNIRSSGSAASN NPGRNT RGRGR    G+GQIAATFVSA GEPISDRRCF
Sbjct: 841 NGGNSAARSNIRSSGSAASNTNPGRNTGRGRGRGQGQGQGQIAATFVSAIGEPISDRRCF 900

Query: 316 VCGDPSHFANVCPNRGA 329
           VCGDPSHFANVCPNRGA
Sbjct: 901 VCGDPSHFANVCPNRGA 916

[Close]

BLAST of Lag0026521 vs. ExPASy TrEMBL
Match: A0A6J1IXM8 (DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111481572 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.0e-158
Identity = 278/317 (87.70%), Postives = 290/317 (91.48%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYM
Sbjct: 601 FLDARFNKQKLFEAMEVFFERSNGSGGDENHAVG-EVVQRCRLCQDSDMVLKRNRDGNYM 660

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLIQFKFRQLEIPPNYN NHLGC
Sbjct: 661 VGCLGFPQCRNVVWLPGSIAEAAVTSNRCNSCTPGPVYLIQFKFRQLEIPPNYNPNHLGC 720

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQV
Sbjct: 721 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTAQSVCVFCQQLDHSSNDCPSQV 780

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSAR RQ+GESS SCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ 
Sbjct: 781 VGSRSARHRQTGESSFSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFAWEDSVDSV 840

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF 315
           N GNSA +SNIRSS SAASN NPGRNT RGR    G+G+GQIAATFVSATGEPISDRRCF
Sbjct: 841 NGGNSAAQSNIRSSASAASNTNPGRNTGRGRGWGQGQGQGQIAATFVSATGEPISDRRCF 900

Query: 316 VCGDPSHFANVCPNRGA 329
           VCGDPSHFANVCPNRGA
Sbjct: 901 VCGDPSHFANVCPNRGA 916

[Close]

BLAST of Lag0026521 vs. ExPASy TrEMBL
Match: A0A6J1J603 (DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111481572 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.0e-158
Identity = 278/317 (87.70%), Postives = 290/317 (91.48%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR NK KL EAM VFFERS+GSGGDENHA   EVV+RC LCQDSDMVLKRNR+GNYM
Sbjct: 585 FLDARFNKQKLFEAMEVFFERSNGSGGDENHAVG-EVVQRCRLCQDSDMVLKRNRDGNYM 644

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGCLGFPQCRNVVWLPGSIAEAAVTSN CNSCTPGPVYLIQFKFRQLEIPPNYN NHLGC
Sbjct: 645 VGCLGFPQCRNVVWLPGSIAEAAVTSNRCNSCTPGPVYLIQFKFRQLEIPPNYNPNHLGC 704

Query: 136 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTGQSVCIFCQQVGHSSNDCPSQV 195
           IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNT QSVC+FCQQ+ HSSNDCPSQV
Sbjct: 705 IGGCDDILRQLTEICGTGSRISARGRGTSSSSVQRGNTAQSVCVFCQQLDHSSNDCPSQV 764

Query: 196 VGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVWEDNVDNG 255
           VGSRSAR RQ+GESS SCSNCGTPCVLRTANT NNRGRKFYKCQSQECNFF WED+VD+ 
Sbjct: 765 VGSRSARHRQTGESSFSCSNCGTPCVLRTANTTNNRGRKFYKCQSQECNFFAWEDSVDSV 824

Query: 256 NAGNSAPRSNIRSSGSAASNPNPGRNTVRGR----GRGRGQIAATFVSATGEPISDRRCF 315
           N GNSA +SNIRSS SAASN NPGRNT RGR    G+G+GQIAATFVSATGEPISDRRCF
Sbjct: 825 NGGNSAAQSNIRSSASAASNTNPGRNTGRGRGWGQGQGQGQIAATFVSATGEPISDRRCF 884

Query: 316 VCGDPSHFANVCPNRGA 329
           VCGDPSHFANVCPNRGA
Sbjct: 885 VCGDPSHFANVCPNRGA 900

[Close]

BLAST of Lag0026521 vs. TAIR 10
Match: AT5G63920.1 (topoisomerase 3alpha )

HSP 1 Score: 359.8 bits (922), Expect = 2.4e-99
Identity = 186/327 (56.88%), Postives = 233/327 (71.25%), Query Frame = 0


Query: 16  YLQARLNKLKLLEAMGVFFERSHGSGGDENHAAAREVVRRCGLCQDSDMVLKRNREGNYM 75
           +L AR+ K KLLEAM +FFERS+ +   E+  A  EVVRRC LC +SDM L++NR+GN+M
Sbjct: 603 FLDARVKKSKLLEAMTIFFERSNNTDESESQTAG-EVVRRCNLCNESDMALRKNRDGNFM 662

Query: 76  VGCLGFPQCRNVVWLPGSIAEAAVTSNCCNSCTPGPVYLIQFKFRQLEIPPNYNANHLGC 135
           VGC+ +PQCRN VWLPG   EA+VT+N C SC PGPVY I FKFRQ+ IPP ++ NHLGC
Sbjct: 663 VGCMNYPQCRNAVWLPGPTLEASVTTNVCQSCGPGPVYKILFKFRQIGIPPGFDVNHLGC 722

Query: 136 IGGCDDILRQLTEICGTGSRISARGR-GTS-SSSVQRGNTGQS-VCIFCQQVGHSSNDCP 195
           +GGCDDIL+QL +ICGTGSR  AR   GT+ S+++Q  NT QS VCI CQQ GH+S +CP
Sbjct: 723 VGGCDDILKQLIDICGTGSRSQARRTPGTAPSNNIQGSNTRQSNVCIHCQQRGHASTNCP 782

Query: 196 SQVVGSRSAR----RRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYKCQSQECNFFVW 255
           S+V  SR++R      ++ ES+VSC+ CG+ CVLRTANT  NRGR+F+ C +Q C+FF W
Sbjct: 783 SRVPASRNSRPTATNPRNDESTVSCNTCGSQCVLRTANTEANRGRQFFSCPTQGCSFFAW 842

Query: 256 EDNVDNGNAGNSAPRSNIRSSGSAASNPNPGRNTVRGRGR---------GRGQIAATFVS 315
           ED+++N ++GN+   SN  S GS       GR   RGRGR         GR     +FVS
Sbjct: 843 EDSINN-SSGNATTGSN--SGGS-------GRRGSRGRGRGGRGGQSSGGRRGSGTSFVS 902

Query: 316 ATGEPISDRRCFVCGDPSHFANVCPNR 327
           ATGEP+S  RCF CGDPSHFAN CPNR
Sbjct: 903 ATGEPVSGIRCFSCGDPSHFANACPNR 918

[Close]

BLAST of Lag0026521 vs. TAIR 10
Match: AT5G13920.1 (GRF zinc finger / Zinc knuckle protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 30/76 (39.47%), Postives = 37/76 (48.68%), Query Frame = 0


Query: 178 CIFCQQVGHSSNDCPSQVVGSRSARRRQSGESSVSCSNCGTPCVLRTANTANNRGRKFYK 237
           C  C+Q GH  NDCP +               ++ C   G  C ++ ANT  N GRKFYK
Sbjct: 11  CFRCRQAGHWINDCPLK-------SYTDDPPPAIQCPCGGGFCEIKVANTRENPGRKFYK 70

Query: 238 C-QSQECNFFVWEDNV 253
           C  +Q C FF W D V
Sbjct: 71  CPTAQNCCFFKWCDKV 79

[Close]

BLAST of Lag0026521 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.9e-04
Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 0


Query: 216 CGTP-CVLRTANTANNRGRKFYKCQSQE----CNFFVWEDNVDNGNAGNSAPRSNIRSSG 275
           CG   C++ T+NT  N GRKFYKC ++E    C FF W D V   ++G S   SN   +G
Sbjct: 98  CGVGICLILTSNTPKNPGRKFYKCPNREENGGCGFFQWCDAVQ--SSGTSTTTSNSYGNG 157

Query: 276 SAASNPN 278
           +    P+
Sbjct: 158 NDTKFPD 162

The following BLAST results are available for this feature:

BLAST of Lag0026521 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022154286.1	1.9e-162	89.49	DNA topoisomerase 3-alpha [Momordica charantia]	[more]
XP_038904102.1	1.6e-161	89.78	DNA topoisomerase 3-alpha isoform X2 [Benincasa hispida]	[more]
XP_038904101.1	1.6e-161	89.78	DNA topoisomerase 3-alpha isoform X1 [Benincasa hispida]	[more]
XP_038904103.1	1.6e-161	89.78	DNA topoisomerase 3-alpha isoform X3 [Benincasa hispida] >XP_038904104.1 DNA top...	[more]
XP_022934066.1	6.6e-160	88.64	DNA topoisomerase 3-alpha isoform X1 [Cucurbita moschata]	[more]

BLAST of Lag0026521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVP1	3.4e-98	56.88	DNA topoisomerase 3-alpha OS=Arabidopsis thaliana OX=3702 GN=TOP3A PE=1 SV=1	[more]
C7J0A2	6.6e-78	48.47	DNA topoisomerase 3-alpha OS=Oryza sativa subsp. japonica OX=39947 GN=TOP3A PE=3...	[more]
Q13472	2.9e-33	31.23	DNA topoisomerase 3-alpha OS=Homo sapiens OX=9606 GN=TOP3A PE=1 SV=1	[more]
O70157	1.2e-31	32.12	DNA topoisomerase 3-alpha OS=Mus musculus OX=10090 GN=Top3a PE=2 SV=1	[more]
Q9NG98	6.1e-07	33.78	DNA topoisomerase 3-alpha OS=Drosophila melanogaster OX=7227 GN=Top3alpha PE=2 S...	[more]

BLAST of Lag0026521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DNA0	9.0e-163	89.49	DNA topoisomerase OS=Momordica charantia OX=3673 GN=LOC111021577 PE=3 SV=1	[more]
A0A6J1F1M3	3.2e-160	88.64	DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111441350 PE=3 SV=1	[more]
A0A6J1F0T9	3.2e-160	88.64	DNA topoisomerase OS=Cucurbita moschata OX=3662 GN=LOC111441350 PE=3 SV=1	[more]
A0A6J1IXM8	1.0e-158	87.70	DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111481572 PE=3 SV=1	[more]
A0A6J1J603	1.0e-158	87.70	DNA topoisomerase OS=Cucurbita maxima OX=3661 GN=LOC111481572 PE=3 SV=1	[more]

BLAST of Lag0026521 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63920.1	2.4e-99	56.88	topoisomerase 3alpha	[more]
AT5G13920.1	2.1e-07	39.47	GRF zinc finger / Zinc knuckle protein	[more]
AT3G42860.1	2.9e-04	40.30	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 309..325 e-value: 0.0089 score: 23.9 coord: 177..193 e-value: 0.0097 score: 23.6
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 178..193 e-value: 0.0018 score: 18.2
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 308..325 score: 8.729682
None	No IPR available	GENE3D	3.30.65.10	Bacterial Topoisomerase I, domain 1	coord: 42..91 e-value: 2.6E-5 score: 25.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..215
None	No IPR available	PANTHER	PTHR33680:SF4	ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN	coord: 169..261
None	No IPR available	PANTHER	PTHR33680	OS07G0190500 PROTEIN	coord: 169..261
IPR010666	Zinc finger, GRF-type	PFAM	PF06839	zf-GRF	coord: 212..251 e-value: 5.8E-12 score: 45.5
IPR013498	DNA topoisomerase, type IA, zn finger	PFAM	PF01396	zf-C4_Topoisom	coord: 54..91 e-value: 3.6E-8 score: 33.1
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 303..326
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 160..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026521.1	Lag0026521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
cellular_component	GO:0005694	chromosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003916	DNA topoisomerase activity
molecular_function	GO:0003676	nucleic acid binding