Lag0026214 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0026214
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr10: 32497219 .. 32498769 (+)
RNA-Seq Expression	Lag0026214
Synteny	Lag0026214

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGGTTGGGGTTTCGCAATATGGAACTTTTCAACCAAGGCATGTTGGCCAAGCAGTACTGGCGTGTCCTCCAAGACCTCTCTTCTCTATTGTGTTCTGTGCTCAAGGGTCGCTATTTTCCTCGGATAGGGTTCTTGGAGGCAGAACTTGGGTCGCGTCCGTCGTTTGTCTGGCGCAACTTGTTATGGGGGCGGGAGCTCTTAGTCCGAGGTTGTCGCTGGAGGATCGGTAACGGGCGATCTACGCCCATTTATGGTTCAAACTGGCTGCCAAACGAGTTCTCTCTTCAGGTACAGTCGGCTCCATCGCTTCCTTTTGATAGTACGGAAAGTGACTTTTTTTCTGTGTCTGGTGGATGGAACGAGGTTATGCTTAGAGCCCACTTTAATGAGTAAGATCATGAGGCCATTCTGAGGATTCTGGTAAGGCAGGGTTTGGGGGAGGATCGCTTAATTTGGCATTTCGAGAAGCACGGAGTCTTCTCTGTGAAGAGTGGATATCGGTTTGCCCATATGTAGGGGGTCCAGGACCGGCCTTCCCCTTCGAACCCTGATAGAATGAGGGCGTGGTGGGCTGGTCTTTGGAGACTGAATGTGCCTAGTAAGCTCAGGTTTTTCATCTGGCGACTGTTCCATGACCGTTTGCCAACTAAGGTAAACCTTCTCAAGCGCGGGCTTAATGTTTCGAGTCTGTGTGTTTTGTGCAGTGGGGATGCGGAGGATTGTCTTCACCTGTTCTGGAATTGCCCTGTGGTCAAGAGTATGTGGTTGTGCTCCAAGTTTGCTTCTTTTCATCGACCCTTCTCCCAATTCAGGTTCGAGGATATCATTGAGGCGATGAAGGACAGGCTAGTAGGGGCAGATTTTGAGCTGGTGGTTGTCTTTTGGTGGTCTGTATGGAATCTGCGTAACATCATGAGCTGGGGTGGCCATTCAGACGGTCGGGATCTATGGACATACTCGAGTGATTACCTTAGTGCCTTCCATGCTGGTGGGAGGCGTGGCCTAGTAGGGGAATCCTTACGGTCCTAGATGAGTGAGTGTGTAGAGCGTGGGGTATGGAGACCCCCCCCTTCGGGGAAGTTGAAGCTTAACGTCGACGCTTCTGTCAGGCCTGACACATGGGATGCTGGAGGTGGCTGTGTTCTGCGTGGGGTAGAGGGTGAGGTCTTTATGGCGGCTTGTTTGAGATTACAGAGGTGTTGGAGCGTGGATCTGGCTGAGGGTTGGGCGGTGCTTAGAGGGGTCCAGCTTGCTCAGCAGATGGGGTTTGAAGGATTTGTAGTGGAGACAGACTCGTTGAGTTTGGTCAAGATTCTCCATGGTGAGCTGCATGATGTCTCGGAAGTGGGGTTGCTGATGGATGATTTTCGAGGGATTCTCCACCCTTGGGTCAATGACAGGGTTTTGTATTCGCCACGTCAGGGGAATAAGGTGGCACATGTTTTGGCTAGCTTGGCCTTTTCGCACAGTGACCGTGTTTGGATTGACAAATGGCCTACCAAAATTTCTGATGCTCTACGGTGTGATGTTGTTTCGTCCATGTGA

mRNA sequence

ATGGGTGGGTTGGGGTTTCGCAATATGGAACTTTTCAACCAAGGCATGTTGGCCAAGCAGTACTGGCGTGTCCTCCAAGACCTCTCTTCTCTATTGTGTTCTGTGCTCAAGGGTCGCTATTTTCCTCGGATAGGGTTCTTGGAGGCAGAACTTGGGTCGCGTCCGTCGTTTGTCTGGCGCAACTTGTTATGGGGGCGGGAGCTCTTAGTCCGAGGTTGTCGCTGGAGGATCGGTAACGGGCGATCTACGCCCATTTATGGTTCAAACTGGCTGCCAAACGAGTTCTCTCTTCAGGTACAGTCGGCTCCATCGCTTCCTTTTGATAGTACGGAAAGTGACTTTTTTTCTGTGTCTGGTGGATGGAACGAGGGGGTCCAGGACCGGCCTTCCCCTTCGAACCCTGATAGAATGAGGGCGTGGTGGGCTGGTCTTTGGAGACTGAATGTGCCTAGTAAGCTCAGGTTTTTCATCTGGCGACTGTTCCATGACCGTTTGCCAACTAAGGTAAACCTTCTCAAGCGCGGGCTTAATGTTTCGAGTCTGTGTGTTTTGTGCAGTGGGGATGCGGAGGATTGTCTTCACCTGTTCTGGAATTGCCCTGTGGTCAAGAGTATGTGGTTGTGCTCCAAGTTTGCTTCTTTTCATCGACCCTTCTCCCAATTCAGGTTCGAGGATATCATTGAGGCGATGAAGGACAGGCTAGTAGGGGCAGATTTTGAGCTGGTGGTTGTCTTTTGGTGGTCTGTATGGAATCTGCGTAACATCATGAGCTGGGGTGGCCATTCAGACGGTCGGGATCTATGGACATACTCGAGTGATTACCTTAGTGCCTTCCATGCTGGTGGGAGGCGTGGCCTAGTAGGGGAATCCTTACGGCCTGACACATGGGATGCTGGAGGTGGCTGTGTTCTGCGTGGGGTAGAGGGTGAGGTCTTTATGGCGGCTTGTTTGAGATTACAGAGGTGTTGGAGCGTGGATCTGGCTGAGGGTTGGGCGGTGCTTAGAGGGGTCCAGCTTGCTCAGCAGATGGGGTTTGAAGGATTTGTAGTGGAGACAGACTCGTTGAGTTTGGTCAAGATTCTCCATGGTGAGCTGCATGATGTCTCGGAAGTGGGGTTGCTGATGGATGATTTTCGAGGGATTCTCCACCCTTGGGTCAATGACAGGGTTTTGTATTCGCCACGTCAGGGGAATAAGGTGGCACATGTTTTGGCTAGCTTGGCCTTTTCGCACAGTGACCGTGTTTGGATTGACAAATGGCCTACCAAAATTTCTGATGCTCTACGGTGTGATGTTGTTTCGTCCATGTGA

Coding sequence (CDS)

ATGGGTGGGTTGGGGTTTCGCAATATGGAACTTTTCAACCAAGGCATGTTGGCCAAGCAGTACTGGCGTGTCCTCCAAGACCTCTCTTCTCTATTGTGTTCTGTGCTCAAGGGTCGCTATTTTCCTCGGATAGGGTTCTTGGAGGCAGAACTTGGGTCGCGTCCGTCGTTTGTCTGGCGCAACTTGTTATGGGGGCGGGAGCTCTTAGTCCGAGGTTGTCGCTGGAGGATCGGTAACGGGCGATCTACGCCCATTTATGGTTCAAACTGGCTGCCAAACGAGTTCTCTCTTCAGGTACAGTCGGCTCCATCGCTTCCTTTTGATAGTACGGAAAGTGACTTTTTTTCTGTGTCTGGTGGATGGAACGAGGGGGTCCAGGACCGGCCTTCCCCTTCGAACCCTGATAGAATGAGGGCGTGGTGGGCTGGTCTTTGGAGACTGAATGTGCCTAGTAAGCTCAGGTTTTTCATCTGGCGACTGTTCCATGACCGTTTGCCAACTAAGGTAAACCTTCTCAAGCGCGGGCTTAATGTTTCGAGTCTGTGTGTTTTGTGCAGTGGGGATGCGGAGGATTGTCTTCACCTGTTCTGGAATTGCCCTGTGGTCAAGAGTATGTGGTTGTGCTCCAAGTTTGCTTCTTTTCATCGACCCTTCTCCCAATTCAGGTTCGAGGATATCATTGAGGCGATGAAGGACAGGCTAGTAGGGGCAGATTTTGAGCTGGTGGTTGTCTTTTGGTGGTCTGTATGGAATCTGCGTAACATCATGAGCTGGGGTGGCCATTCAGACGGTCGGGATCTATGGACATACTCGAGTGATTACCTTAGTGCCTTCCATGCTGGTGGGAGGCGTGGCCTAGTAGGGGAATCCTTACGGCCTGACACATGGGATGCTGGAGGTGGCTGTGTTCTGCGTGGGGTAGAGGGTGAGGTCTTTATGGCGGCTTGTTTGAGATTACAGAGGTGTTGGAGCGTGGATCTGGCTGAGGGTTGGGCGGTGCTTAGAGGGGTCCAGCTTGCTCAGCAGATGGGGTTTGAAGGATTTGTAGTGGAGACAGACTCGTTGAGTTTGGTCAAGATTCTCCATGGTGAGCTGCATGATGTCTCGGAAGTGGGGTTGCTGATGGATGATTTTCGAGGGATTCTCCACCCTTGGGTCAATGACAGGGTTTTGTATTCGCCACGTCAGGGGAATAAGGTGGCACATGTTTTGGCTAGCTTGGCCTTTTCGCACAGTGACCGTGTTTGGATTGACAAATGGCCTACCAAAATTTCTGATGCTCTACGGTGTGATGTTGTTTCGTCCATGTGA

Protein sequence

MGGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRNLLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGWNEGVQDRPSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDAEDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSVWNLRNIMSWGGHSDGRDLWTYSSDYLSAFHAGGRRGLVGESLRPDTWDAGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEGWAVLRGVQLAQQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHVLASLAFSHSDRVWIDKWPTKISDALRCDVVSSM

Homology

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BLAST of Lag0026214 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 1.6e-73
Identity = 163/517 (31.53%), Postives = 247/517 (47.78%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GG+GFR++ELFN+ +LAKQ WR+L   +S+L  VLKGRYF    F+EA++   PS++WR+
Sbjct: 644  GGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRS 703

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFS-VSGG 121
            +LWGR+LL +G RWRIGNG S  IYG NW+PN+ +L++ S+P LP  S  S       GG
Sbjct: 704  ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 122  WNEGV-----------------------QDR----------------------------- 181
            W   V                       +DR                             
Sbjct: 764  WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA 823

Query: 182  PSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGD 241
            PS S+ + +R WW G W++++P+K++ F+WRL  DRLPT  NL KRG+ +++ C  C  +
Sbjct: 824  PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRN 883

Query: 242  AEDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWS 301
             ED +HLFW C   +++W+ SKF     PF       I+    + L  ADFE + V  W 
Sbjct: 884  GEDSIHLFWICKFAEALWINSKFGKL-SPFL------ILRESHESLSKADFEELCVVIWG 943

Query: 302  VWNLRNIMSWGGHSD-----GRDLWTYSSDYLSAFHAGGRRGLVGE-------------- 361
            +WN RN  ++   +      G +L  +++ Y   F       + G               
Sbjct: 944  LWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDE 1003

Query: 362  ---------SLRPDTWDAGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEGWAVLRGVQLA 421
                     S       AG G ++    G+V  AA   L+   SVD+AE  A + G+QLA
Sbjct: 1004 GIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLA 1063

Query: 422  QQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKV 437
             ++G                +H  L D+SE G ++   +      ++    +  R+GNK 
Sbjct: 1064 SEIG----------------MHPALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKA 1123

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BLAST of Lag0026214 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-59
Identity = 155/515 (30.10%), Postives = 231/515 (44.85%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGFR++E FNQ +LAKQ WR+L+   SL+  + + RY P + FLEAE+G+ PSF+WR+
Sbjct: 783  GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 842

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGW 121
            L WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP  +   D F+ SG W
Sbjct: 843  LQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQW 902

Query: 122  NEGV-------------------------------------------------QDRPS-- 181
            N  +                                                 +D+ S  
Sbjct: 903  NVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGE 962

Query: 182  PS-NPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDA 241
            PS   D    +W  +W L +P+K++FF+WR   D LP    L  R +  + +C  C   A
Sbjct: 963  PSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKA 1022

Query: 242  EDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSV 301
            E  LH  W C   K +W  S + +    +    F ++  A++    G +  L     W +
Sbjct: 1023 ESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGL 1082

Query: 302  WNLRNIMSWGGHSD----------------------GRDLWTYSSDYLSAFH------AG 361
            WN RN   + G S+                         +    S   +  H      AG
Sbjct: 1083 WNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAG 1142

Query: 362  GRRGLVGESLRPDTWDAGGGCVLRGVEGEVFMAACL-RLQRCWSVDLAEGWAVLRGVQLA 421
              +  V  +++      G G V+R   GE FMAAC+ R+Q  +     E  A + G++ A
Sbjct: 1143 IYKINVDGAVKSGDSVRGVGVVVRNANGE-FMAACVRRIQASYGARQTELMATIEGLRFA 1202

Query: 422  QQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKV 435
              MGF   V+E D+   +  +          GLL+++   +LH +      ++PR GNKV
Sbjct: 1203 IDMGFTAAVLEMDAQDCINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQWTPRSGNKV 1262

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BLAST of Lag0026214 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-59
Identity = 159/512 (31.05%), Postives = 235/512 (45.90%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGFR++E FNQ +LAKQ WR+L+   SL+  + + RY P + FLEAE+G+ PSF+WR+
Sbjct: 517  GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 576

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGW 121
            L WG+ELL +G RWR+G+G S  +Y   WLP     ++ S P LP  +   D F+ SG W
Sbjct: 577  LQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQW 636

Query: 122  N------------------------------------------------EGVQDRPSPSN 181
            N                                                 G++       
Sbjct: 637  NVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGE 696

Query: 182  P----DRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDA 241
            P    D    +W  +W L +P+K++FF+WR   D LP    L  R +  + +C  C   A
Sbjct: 697  PSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKA 756

Query: 242  EDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSV 301
            E  LH  W C   K +W  S + +    +    F ++  A++    G +  L     W +
Sbjct: 757  ESVLHAVWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGL 816

Query: 302  WNLRNIMSWGGHSDG--------RDLWTYSSDYLSAFHA-GGRRGLVGESL---RP---- 361
            WN RN   + G S+           L    SD  +  H   GR+      L   RP    
Sbjct: 817  WNRRNSFIFEGKSETAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPPAV 876

Query: 362  DTWDA--GGGCVLRGVEGEVFMAACL-RLQRCWSVDLAEGWAVLRGVQLAQQMGFEGFVV 421
             + D+  G G V+R   GE FMAAC+ R+   +     E  A + G++ A  MGF   ++
Sbjct: 877  KSGDSVRGVGVVVRNANGE-FMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAIL 936

Query: 422  ETDSLS-LVKILHGELHD------VSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHV 435
            E D+   L  I   E ++      + EV  L+++FR ++  W       +PR GNKVAH 
Sbjct: 937  EMDAQDCLNSIFSTEEYNGIDGPLLEEVNYLLNNFRAVVCHW-------TPRCGNKVAHT 996

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BLAST of Lag0026214 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 227.3 bits (578), Expect = 2.6e-55
Identity = 143/501 (28.54%), Postives = 235/501 (46.91%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GG+GFR++  FNQ ++AKQ WR++Q  SSL+  VLK RYF   GF+ A LGS+PSFVWR+
Sbjct: 650  GGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGLGSKPSFVWRS 709

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESD-------- 121
            ++WGR++L +G RWRIGNG++  +YG+NW+P   + +  SAPS+  D+T ++        
Sbjct: 710  IVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTVAELIDEKQQW 769

Query: 122  ---------------------------------------FFSVSGGWNEGVQ----DRPS 181
                                                   ++SV  G+   ++    + PS
Sbjct: 770  REDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVAMRIKFPEDPS 829

Query: 182  PSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDAE 241
             SN D  +  W  +W+L +P K++ F+WR  HD LPT  NL K+ +    +C  C    E
Sbjct: 830  CSNHD--QNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLWKKKVLQEPMCQSCHCHVE 889

Query: 242  DCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSVW 301
               H    C   + +W  S  A   R   +     +++    +    +   V    W++W
Sbjct: 890  TVSHALVECNRARKIWRYSNLAEELRGVYRCDIVWMLQFWPRQHAKVEGAEVAALLWAIW 949

Query: 302  NLRNIMSWGGHSDG-RDLWTYSSDYLSAFHAGGRRGLV----GESLRPDTWD-------- 361
              RN   + G  +    +   +   + +F    +  +V    G + R   W         
Sbjct: 950  KARNKWLFEGKKENPLRVVANAEAIVESFKKIRQPEMVYKTKGNAERQKQWSPPPNGWQK 1009

Query: 362  -------------AGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEGWAVLRGVQLAQQMG 421
                         AG G V+R  +G    AA   L+   SV +AE  A+  G+++A++  
Sbjct: 1010 VNVDAAVDVENQMAGLGVVVRDSDGNCRAAAIKSLRLPGSVAMAEATAMEWGLKVAEKAH 1069

Query: 422  FEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHVL 425
                + E+DSL ++ +++ +   ++E+G L+ D +  L  + N +  +SPR  N  AH L
Sbjct: 1070 ITFGIFESDSLEVIDLINKKSSSLTEIGWLISDIQENLQNFQNFKAQHSPRDCNYAAHSL 1129

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BLAST of Lag0026214 vs. NCBI nr
Match: XP_030939975.1 (uncharacterized protein LOC115964883 [Quercus lobata])

HSP 1 Score: 221.1 bits (562), Expect = 1.9e-53
Identity = 149/525 (28.38%), Postives = 232/525 (44.19%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGF+++ELFN  ML KQ WR++ +  SL   V K ++FP    L+  +    S+ W++
Sbjct: 830  GGLGFKDIELFNIAMLGKQVWRLIHNKDSLFYKVFKAKFFPNCSILDEGVKENGSYAWQS 889

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAP------------------ 121
            +L  R ++  G +WRIG+G S  I G  WLP+ FS +V S                    
Sbjct: 890  ILKARGVVRMGSKWRIGDGHSVRIRGDKWLPDLFSSRVVSPQKNFPNNTRVCALIDEENR 949

Query: 122  --------------------SLPFD-----------STESDFFSVSGGWNEGVQ----DR 181
                                SLP              T + +++    +   +Q      
Sbjct: 950  CWMEDRIREEFLPHEAEAILSLPLSFNGKEDRLIWAETANGYYTTKSAYRLLLQAAEAAA 1009

Query: 182  PSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGD 241
            P  SNP   + +W  LW LNVP+K+R F+WR  +D LPTK NLLKR +   + C  C G+
Sbjct: 1010 PGTSNPADQKPFWQELWSLNVPNKIRHFLWRAANDSLPTKKNLLKRNIIQDTTCERCGGE 1069

Query: 242  AEDCLHLFWNCPVVKSMW---------LCSKFASFHRPFSQFRFEDIIEAMKDRLVGADF 301
             ED +H  W C ++K +W         L  KFASFH         D+++ +  + +    
Sbjct: 1070 IEDGIHAIWGCQMIKQVWWELEKCREFLNEKFASFH---------DLLQGILAQKIPNFA 1129

Query: 302  ELVVVFWWSVWNLRNIMSWGGHS-DGRDLWTYSSDYLSAFHAGGRRGLVGESLRP----- 361
            EL     WS+W+ RN    G  S     ++  + + L  FH+      V E  RP     
Sbjct: 1130 ELFAFIGWSIWHDRNARRLGSPSLPTEKIYRVAVERLREFHS------VQEDPRPQLPVH 1189

Query: 362  -----------------------DTWDAGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEG 421
                                   D   AG G V+R  EG V  A   R+    +V   E 
Sbjct: 1190 HPTHWLPPSPSVYKVNFDGATFLDIAAAGLGVVIRDSEGLVIAALSERIHLPPTVAALEA 1249

Query: 422  WAVLRGVQLAQQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRV 435
             A  R +  A+++G +  V E DS  + K+L  E   ++  G ++D+ R +   + +   
Sbjct: 1250 LACRRSIVFARELGLQDVVFEGDSEVVFKLLTAEQPCMAGFGHIIDESRSLAAVFRSATF 1309

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BLAST of Lag0026214 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 6.0e-18
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 2   GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
           GGLGFR++  FNQ +LAKQ +R++    +LL  +L+ RYFP    +E  +G+RPS+ WR+
Sbjct: 55  GGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRS 114

Query: 62  LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSL 98
           ++ GRELL RG    IG+G  T ++   W+ +E  L
Sbjct: 115 IIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

[Close]

BLAST of Lag0026214 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.7e-15
Identity = 78/351 (22.22%), Postives = 144/351 (41.03%), Query Frame = 0


Query: 2   GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRP----SF 61
           GGLG R  +  N+ +++K  WR+LQ+ +SL   VL+ +Y   +G +       P    S 
Sbjct: 99  GGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKY--HVGEIRDSRWLIPKGSWSS 158

Query: 62  VWRNLLWG-RELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSA--PSLPFDSTESDF 121
            WR++  G R+++  G  W  G+G+    +   W+  +  L++ +   P+        D 
Sbjct: 159 TWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKDL 218

Query: 122 FSVSGGWN------------------------EGVQDR---------------------- 181
           +    GW+                         G +DR                      
Sbjct: 219 WIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTV 278

Query: 182 ---PSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLC 241
              P P+    M +++  LW++ VP +++ F+W + +  + T+    +R L+ S++C +C
Sbjct: 279 DEVPRPN----MASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVC 338

Query: 242 SGDAEDCLHLFWNCPVVKSMWLCSKFASFHRP---FSQFRFEDIIEAMKDRLVGADFE-- 289
            G  E  LH+  +CP    +W+  +     R    FS+  FE + + + DR    D    
Sbjct: 339 KGGVESMLHVLRDCPAQLGIWV--RVVPQRRQQGFFSKSLFEWLYDNLGDRSGCEDIPWS 398

[Close]

BLAST of Lag0026214 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 8.0e-74
Identity = 163/517 (31.53%), Postives = 247/517 (47.78%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GG+GFR++ELFN+ +LAKQ WR+L   +S+L  VLKGRYF    F+EA++   PS++WR+
Sbjct: 644  GGMGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRS 703

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFS-VSGG 121
            +LWGR+LL +G RWRIGNG S  IYG NW+PN+ +L++ S+P LP  S  S       GG
Sbjct: 704  ILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGG 763

Query: 122  WNEGV-----------------------QDR----------------------------- 181
            W   V                       +DR                             
Sbjct: 764  WQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQA 823

Query: 182  PSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGD 241
            PS S+ + +R WW G W++++P+K++ F+WRL  DRLPT  NL KRG+ +++ C  C  +
Sbjct: 824  PSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRN 883

Query: 242  AEDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWS 301
             ED +HLFW C   +++W+ SKF     PF       I+    + L  ADFE + V  W 
Sbjct: 884  GEDSIHLFWICKFAEALWINSKFGKL-SPFL------ILRESHESLSKADFEELCVVIWG 943

Query: 302  VWNLRNIMSWGGHSD-----GRDLWTYSSDYLSAFHAGGRRGLVGE-------------- 361
            +WN RN  ++   +      G +L  +++ Y   F       + G               
Sbjct: 944  LWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDE 1003

Query: 362  ---------SLRPDTWDAGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEGWAVLRGVQLA 421
                     S       AG G ++    G+V  AA   L+   SVD+AE  A + G+QLA
Sbjct: 1004 GIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQLA 1063

Query: 422  QQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKV 437
             ++G                +H  L D+SE G ++   +      ++    +  R+GNK 
Sbjct: 1064 SEIG----------------MHPALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGNKA 1123

[Close]

BLAST of Lag0026214 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.5e-60
Identity = 155/515 (30.10%), Postives = 231/515 (44.85%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGFR++E FNQ +LAKQ WR+L+   SL+  + + RY P + FLEAE+G+ PSF+WR+
Sbjct: 783  GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 842

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGW 121
            L WG+ELL +G RWR+GNG S  +Y   WLP     ++ S P LP  +   D F+ SG W
Sbjct: 843  LQWGKELLNKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQW 902

Query: 122  NEGV-------------------------------------------------QDRPS-- 181
            N  +                                                 +D+ S  
Sbjct: 903  NVPLLKDIFWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGE 962

Query: 182  PS-NPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDA 241
            PS   D    +W  +W L +P+K++FF+WR   D LP    L  R +  + +C  C   A
Sbjct: 963  PSVRVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKA 1022

Query: 242  EDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSV 301
            E  LH  W C   K +W  S + +    +    F ++  A++    G +  L     W +
Sbjct: 1023 ESVLHAVWLCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGL 1082

Query: 302  WNLRNIMSWGGHSD----------------------GRDLWTYSSDYLSAFH------AG 361
            WN RN   + G S+                         +    S   +  H      AG
Sbjct: 1083 WNRRNSFIFEGKSETATQLLHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAG 1142

Query: 362  GRRGLVGESLRPDTWDAGGGCVLRGVEGEVFMAACL-RLQRCWSVDLAEGWAVLRGVQLA 421
              +  V  +++      G G V+R   GE FMAAC+ R+Q  +     E  A + G++ A
Sbjct: 1143 IYKINVDGAVKSGDSVRGVGVVVRNANGE-FMAACVRRIQASYGARQTELMATIEGLRFA 1202

Query: 422  QQMGFEGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKV 435
              MGF   V+E D+   +  +          GLL+++   +LH +      ++PR GNKV
Sbjct: 1203 IDMGFTAAVLEMDAQDCINSILSTEECNGIDGLLIEEVNYLLHNFRAVVCQWTPRSGNKV 1262

[Close]

BLAST of Lag0026214 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-59
Identity = 159/512 (31.05%), Postives = 235/512 (45.90%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGFR++E FNQ +LAKQ WR+L+   SL+  + + RY P + FLEAE+G+ PSF+WR+
Sbjct: 554  GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 613

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGW 121
            L WG+ELL +G RWR+G+G S  +Y   WLP     ++ S P LP  +   D F+ SG W
Sbjct: 614  LQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQW 673

Query: 122  N------------------------------------------------EGVQDRPSPSN 181
            N                                                 G++       
Sbjct: 674  NVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGE 733

Query: 182  P----DRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDA 241
            P    D    +W  +W L +P+K++FF+WR   D LP    L  R +  + +C  C   A
Sbjct: 734  PSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKA 793

Query: 242  EDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSV 301
            E  LH  W C   K +W  S + +    +    F ++  A++    G +  L     W +
Sbjct: 794  ESVLHAVWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGL 853

Query: 302  WNLRNIMSWGGHSDG--------RDLWTYSSDYLSAFHA-GGRRGLVGESL---RP---- 361
            WN RN   + G S+           L    SD  +  H   GR+      L   RP    
Sbjct: 854  WNRRNSFIFEGKSETAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPPAV 913

Query: 362  DTWDA--GGGCVLRGVEGEVFMAACL-RLQRCWSVDLAEGWAVLRGVQLAQQMGFEGFVV 421
             + D+  G G V+R   GE FMAAC+ R+   +     E  A + G++ A  MGF   ++
Sbjct: 914  KSGDSVRGVGVVVRNANGE-FMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAIL 973

Query: 422  ETDSLS-LVKILHGELHD------VSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHV 435
            E D+   L  I   E ++      + EV  L+++FR ++  W       +PR GNKVAH 
Sbjct: 974  EMDAQDCLNSIFSTEEYNGIDGPLLEEVNYLLNNFRAVVCHW-------TPRCGNKVAHT 1033

[Close]

BLAST of Lag0026214 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-59
Identity = 159/512 (31.05%), Postives = 235/512 (45.90%), Query Frame = 0


Query: 2    GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
            GGLGFR++E FNQ +LAKQ WR+L+   SL+  + + RY P + FLEAE+G+ PSF+WR+
Sbjct: 517  GGLGFRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRS 576

Query: 62   LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSLQVQSAPSLPFDSTESDFFSVSGGW 121
            L WG+ELL +G RWR+G+G S  +Y   WLP     ++ S P LP  +   D F+ SG W
Sbjct: 577  LQWGKELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQW 636

Query: 122  N------------------------------------------------EGVQDRPSPSN 181
            N                                                 G++       
Sbjct: 637  NVPLLKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGE 696

Query: 182  P----DRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDA 241
            P    D    +W  +W L +P+K++FF+WR   D LP    L  R +  + +C  C   A
Sbjct: 697  PSARVDLNSKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPKCHRKA 756

Query: 242  EDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGADFELVVVFWWSV 301
            E  LH  W C   K +W  S + +    +    F ++  A++    G +  L     W +
Sbjct: 757  ESVLHAVWLCEAAKEVWRNSAWGNVCEVWRVNSFRELWHALQLSSSGEEQGLFAYLCWGL 816

Query: 302  WNLRNIMSWGGHSDG--------RDLWTYSSDYLSAFHA-GGRRGLVGESL---RP---- 361
            WN RN   + G S+           L    SD  +  H   GR+      L   RP    
Sbjct: 817  WNRRNSFIFEGKSETAIQLLSRMTKLAQEFSDANNILHTIHGRQSSPQAPLQGWRPPPAV 876

Query: 362  DTWDA--GGGCVLRGVEGEVFMAACL-RLQRCWSVDLAEGWAVLRGVQLAQQMGFEGFVV 421
             + D+  G G V+R   GE FMAAC+ R+   +     E  A + G++ A  MGF   ++
Sbjct: 877  KSGDSVRGVGVVVRNANGE-FMAACVRRIHASYGARQTELMATIEGLRFAIDMGFTDAIL 936

Query: 422  ETDSLS-LVKILHGELHD------VSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHV 435
            E D+   L  I   E ++      + EV  L+++FR ++  W       +PR GNKVAH 
Sbjct: 937  EMDAQDCLNSIFSTEEYNGIDGPLLEEVNYLLNNFRAVVCHW-------TPRCGNKVAHT 996

[Close]

BLAST of Lag0026214 vs. ExPASy TrEMBL
Match: A0A803QSN3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.2e-59
Identity = 148/512 (28.91%), Postives = 240/512 (46.88%), Query Frame = 0


Query: 2   GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
           GG+GF+++E FNQ +LAKQ W+++ + SSLL  VLK  YF    F+EA+LG   SF+WR+
Sbjct: 292 GGMGFKDLEKFNQSLLAKQGWKIINNPSSLLARVLKACYFTNSTFMEAKLGGFCSFMWRS 351

Query: 62  LLWGRELLVRGCRWRIGNGRSTPIYGSNWL--PNEFSLQVQS------------------ 121
           +LWGR+++ RG RWR+  GR   I    WL  P+ F+L+  +                  
Sbjct: 352 ILWGRKIVERGVRWRVQLGREVRINEDKWLPRPSTFTLRTPTKVNNGTTMDHLKDEKGEW 411

Query: 122 --------------------AP-------SLPFDSTESDFFSVSGGWNEGVQD--RPSPS 181
                               AP        L +D T +  ++VS G+     +     PS
Sbjct: 412 NQDMITQTFHPDDVPIVLGMAPCYNNAIDDLVWDYTPNGMYTVSSGYKVATTNELNAGPS 471

Query: 182 NPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDAEDC 241
           + +  + WW  +W+L VP K+R F WRL++  +P  + L  RG+ +   C  C  + E  
Sbjct: 472 SEEHTKKWWTEIWKLEVPPKVRNFAWRLYNGWIPVNMVLRNRGMKIDPWCCGCGNEEETI 531

Query: 242 LHLFWNCPVVKSMWLCSKFASFHRPFSQFRFE--DIIEAMKDRLVGADFELVVVFWWSVW 301
            H  W CP +K +W   +     +  ++++ E   ++ A+K +   ADF + ++  W +W
Sbjct: 532 EHGIWFCPAIKEIW---QHFLLWKTINRWKGETKHMLMAIKQQTTKADFLMFILLSWLIW 591

Query: 302 NLRNIMSWGGHSDGRDLW----TYSSDYLSAFHAGGRRGL-------------------- 361
           N RN      HS   +LW        D +   H+   + L                    
Sbjct: 592 NRRNKKRLKLHSLPNNLWCRWAQLEMDVMMHNHSNSTQPLKPMTTPAGGWDPPHPGTLCI 651

Query: 362 -VGESLRPDTWDAGGGCVLRGVEGEVFMAACLRLQRCWSVDLAEGWAVLRGVQLAQQMGF 421
               S+    W  G G V+R  EG V  A   + + C+SV+LAE  A+  G+QLA ++  
Sbjct: 652 NTDASVLCKEWKIGLGAVIRNHEGAVVAAEIKQQRGCYSVELAEVLAIRLGIQLANKVKA 711

Query: 422 EGFVVETDSLSLVKILHGELHDVSEVGLLMDDFRGILHPWVNDRVLYSPRQGNKVAHVLA 437
             F+++TD L     L+G+ H  ++   L+DD R      +   V +  R+ NK AH+LA
Sbjct: 712 YPFILQTDCLQAAIYLNGDSHAKTDWSALLDDIRESPEFSMCKAVEHIVRKNNKAAHLLA 771

[Close]

BLAST of Lag0026214 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 4.4e-24
Identity = 72/269 (26.77%), Postives = 111/269 (41.26%), Query Frame = 0


Query: 2   GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
           GG+GF+++E FN  +L KQ WR+L    SL+  V K RYF +   L A LGSRPSFVW++
Sbjct: 54  GGIGFKDIEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKS 113

Query: 62  LLWGRELLVRGCRWRIGNGRSTPIYGSNWL---PNEFSLQVQSAP--------------- 121
           +   +E+L +G R  +GNG    I+   WL   P   +L++Q  P               
Sbjct: 114 IHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSD 173

Query: 122 --------------------------------------SLPFDSTESDFFSVSGGW---N 181
                                                 S  +D T S  ++V  G+    
Sbjct: 174 LIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLT 233

Query: 182 EGVQDRPSPS--NPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSS 210
           + +  R SP   +   +   +  +W+     K++ F+W+   + LP    L  R L+  S
Sbjct: 234 QIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKES 293

[Close]

BLAST of Lag0026214 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 93.6 bits (231), Expect = 4.2e-19
Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 2   GGLGFRNMELFNQGMLAKQYWRVLQDLSSLLCSVLKGRYFPRIGFLEAELGSRPSFVWRN 61
           GGLGFR++  FNQ +LAKQ +R++    +LL  +L+ RYFP    +E  +G+RPS+ WR+
Sbjct: 55  GGLGFRDLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRS 114

Query: 62  LLWGRELLVRGCRWRIGNGRSTPIYGSNWLPNEFSL 98
           ++ GRELL RG    IG+G  T ++   W+ +E  L
Sbjct: 115 IIHGRELLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

[Close]

BLAST of Lag0026214 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 2.1e-10
Identity = 34/134 (25.37%), Postives = 63/134 (47.01%), Query Frame = 0


Query: 128 RPSPSNPDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSG 187
           +P P + +  +A    +W+L+V  K++ F+WR     L T   L  R ++   +C  C  
Sbjct: 25  QPPPGSTEVKQA----IWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCI 84

Query: 188 DAEDCLHLFWNCPVVKSMWLCSKFASFHRPFSQFRFED----IIEAMKDRLVGADFELVV 247
           + E   H+ +NCP  +S+W  +     ++      FED    +I+  K +   +  +  +
Sbjct: 85  EEETIHHIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNS-LDRFL 144

Query: 248 VFW--WSVWNLRNI 256
            FW  W +W  RN+
Sbjct: 145 PFWIMWRLWKSRNV 153

[Close]

BLAST of Lag0026214 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.8e-09
Identity = 69/314 (21.97%), Postives = 117/314 (37.26%), Query Frame = 0


Query: 142 AGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVLCSGDAEDCLHLFWNCPV 201
           A +W+L    K++ F+W+L    L T  NL +R +     C  C  + E   HLF++C  
Sbjct: 16  AKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFY 75

Query: 202 VKSMWLCSKFASFHRPFSQFRFEDIIEAMKDRLVGAD---------FELVVVFWWSVWNL 261
            + +W  S       P  + R   I    K  L+ +          F L +   W +W  
Sbjct: 76  AQQVWRASGI-----PHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKS 135

Query: 262 RN-------IMSW-----GGHSDGRDLWTYSSDYL--------SAFHAGGRRGLVGESLR 321
           RN        +SW        +D ++ W  ++ Y+        S+ H             
Sbjct: 136 RNQLVFQQKSISWQNTLQRARNDVQE-WEDTNTYVQSLNQQVHSSRHQQPTMARTKWQRP 195

Query: 322 PDTW--------------DAGGGCVLRGVEGEVFMAACLRLQRCWSVDL-AEGWAVLRGV 381
           P TW              +A  G ++R   G V+M +   +    S  L +E  A++  +
Sbjct: 196 PSTWIKYNYDGAFNHQTRNAKAGWLMRDENG-VYMGSGQAIGSTTSDSLESEFQALIIAM 255

Query: 382 QLAQQMGFEGFVVETDSLSLVKILH------GELHDVSEVGLLMDDFRGILHPWVNDRVL 406
           Q A   G+   + E DS  + ++++      G  + + E       F   +  WV     
Sbjct: 256 QHAWSQGYRKVIFEGDSKQVEELMNNEKLNFGRFNWIREGRFWQKRFEEAVFKWV----- 315

[Close]

BLAST of Lag0026214 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.5e-08
Identity = 47/202 (23.27%), Postives = 77/202 (38.12%), Query Frame = 0


Query: 31  LLCSVLKGRYFPRIGFLEAELGSRPSFVWRNLLWGRELLVRGCRWRIGNGRSTPIYGSNW 90
           LL S L   +  +  F      +  S++WR L   RE+        +G+G +   +  NW
Sbjct: 25  LLASELVENFLGQRNFWTLNSTTSDSWIWRRLCKLREVARPFVVCDVGSGVTAKFWHDNW 84

Query: 91  L-------------PNEFSLQVQSAPSLPFDSTESDFFSVSGGWNEGVQDRPSPSN---- 150
                         P    L + +   +  D    D F     W     D  +PSN    
Sbjct: 85  TGHGPLIDLVGPLGPQTVGLPIDAVGLI--DCQHDDSFI----WK---TDLHAPSNIFST 144

Query: 151 ---------PDRMRAWWAGLWRLNVPSKLRFFIWRLFHDRLPTKVNLLKRGLNVSSLCVL 207
                     + +  W+  +W  N   K  F  W +  +RL T+  L   GL++ ++C+L
Sbjct: 145 AKTSLALHPQNHIVPWYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRSWGLSIPAVCLL 204

The following BLAST results are available for this feature:

BLAST of Lag0026214 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	1.6e-73	31.53	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
VVA32947.1	1.4e-59	30.10	PREDICTED: retrotransposon [Prunus dulcis]	[more]
ONI01138.1	2.3e-59	31.05	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
XP_024037590.1	2.6e-55	28.54	uncharacterized protein LOC112097210 [Citrus clementina]	[more]
XP_030939975.1	1.9e-53	28.38	uncharacterized protein LOC115964883 [Quercus lobata]	[more]

BLAST of Lag0026214 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	6.0e-18	43.75	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	4.7e-15	22.22	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lag0026214 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	8.0e-74	31.53	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5E4FZN9	6.5e-60	30.10	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
M5W5F3	1.1e-59	31.05	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	1.1e-59	31.05	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
A0A803QSN3	7.2e-59	28.91	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0026214 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	4.4e-24	26.77	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	4.2e-19	43.75	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G02650.1	2.1e-10	25.37	Ribonuclease H-like superfamily protein	[more]
AT3G25270.1	1.8e-09	21.97	Ribonuclease H-like superfamily protein	[more]
AT1G43730.1	1.5e-08	23.27	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 287..410 e-value: 6.9E-8 score: 34.6
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 116..206 e-value: 1.4E-20 score: 73.8
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 296..408 e-value: 6.6E-20 score: 71.2
None	No IPR available	PANTHER	PTHR46736:SF6	SUBFAMILY NOT NAMED	coord: 58..359
None	No IPR available	PANTHER	PTHR46736	FAMILY NOT NAMED	coord: 58..359
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 298..405 e-value: 1.81131E-15 score: 70.4208
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 297..410

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0026214.1	Lag0026214.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity