Lag0026176 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCTGGACTGCCAAGTCTACCTCACCCCATCTGGTTCGAGCCCATACACTTCATTTGAGACAGACTCACCTGGCCTAAGCCGAGGCCGACCCCAAACCTTAAAGGTATTCTTCTCTTTATTCAACTATGCTTTATGTTTTAGTGAAGCTTTACTTGAGATTGGGGGCTACATAGGGGATATGCACTCCCTATTAAACAAAAAGCACATTGGCTTAGCATGTTTTACTAAAAATTACATACTCTAGCCTATTCTCTCATTACTTCCCTACAAGGACTAACGTATGAATGCATGGAGCTAAATTTTGAGCTAACAGGGCATGAGACCGAGGTCGACCCTAGCCTATTCCCTCATTATTCTTTTGCGGAAGTTAACTTTCCGATGCAAGATTGTGAAATCTTCTATCTTTCCTATTCTTACTTGTGGAAAAGCCCTGGATCTGGAATGAAGCACTCTGAATGACCAAGTACGGGGGTCTCGCTGTGCAAAATTAGGAAAATGCTGTGCTCGGCCTCTTCCTGAGGCTGAGGCTGACCAGGGGCATTTTTGTAATCTCTCACCCTTCTCATTTCCATTTCACCTAACCCCTATTTAGGGAGTTTCTACTTTGTCTAGTTTATCCTATCTTGCAGGATAACAGTGACTCTGCACATAAGTCAGCACAGGGCAAAGATCATTACTCTTAAATCGGACTTAAGGAGCTCAACCTATAGCAATAAGTCACCCTGAATCCCAATTCAAGAGTGAGGCTTAATGTTATAGGTAATTTTGGACCACTCCGATGTACAAGGAGCTGACGAGGAAAACCAGGCAGAAATAGAGCTGGAAGATGGACCCCAGAGGCGAAACGAGCCAATAGGTCGGGCAAAGACCGAAGGGGTCAGACTTTCGACCCGACCCCTACTCGGCCTCGGCCATGGTCAAGGCCGAGCTCGATCGCCTTCGTTTGGTCTCTGTTGCCTCTGGCCGCCCCGACTCCCACTAGTTCATCTCGAAACGCCTTCGAATTTCTAAAAACCCTAGGAGCATGAGCATATATTTAAACCCCTCTTTGTCACTGAAGAAAGGGACCCGAACTCTATTCTCTGACCCTCCTCTTGCTCTTACTTTCCTGCTTCCCATCGTCCTTCTTGCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGTTTACTGTCTTGTAGGCCACACCTTCCCTCCTCACAAACAAATTTATCGTTGGTGGCACGTGAAGGCCAGGTGAGTTCCTCCGACCAAATTTGACCATCAACAGACAGTATTTGTCAATTACCATTTGGCAATACTCACTTTGACATTTAATTATTTAGTTATGGATTGGTAGAATTAATTTTTTTTATATTTATTATTGGATTAAAATTTGTTGTGAGATTTATTGTTTATTACATTTAATTTGTGAAATTAATGTTATTTTGTTTGATTAATTACTTTTTTTAGAAAATTTTCTTATTAATTAAATGATGAAAATAAAACTGCTTTAAAAAAATATATTGATGAAAATAAAATTCAAATGATTTGCTTGATATTCAAATATTTCAAATCAAATTTAGCAGACTTTGTTGTGTTTGCTTAGTCAATTTATGTATTGAATTTTGAAATTATTTTGAATATCTTGAATTTATTTTAAGGTGATATTCTTATTTATTTAATGGTTAAAAATCACTTTTGGTCCCTAAACTTTCACAAAAGTAACAGTTTGGTCCCTAAACTTGAATTTATAACGATTTAGTATCTGTACTTTCAATTTGGTAACAATTTGGTCCCTGAACTTTAATAAGTAACAATTTAGTTCCTATACTTTCAAATTTGTAACAATTTAGTCCCTATACTTTAAAATTTGTAACAATTTAATTCTTGTCACAAAAAAAAATCATCAAAATAAAATATCGATTTTTATTATTTAATGATTAAACTTTGTAGCTTATTAACTTATTGGGTCCCAAATTAGTTTATTAATCTATTCGGGTAAGAAATTTCATTAAATCTTTACATTAATTTTTCACGACAGGGACTAAATCGTTACAAAATTTAAAGTACATGGACTAAATTGTTACTTATTAAAGTTCAGGGACTAAATTGTTACAAATTGAAAGTAGAAGGACTAAATCGTTATAAAATTGAAAGTATAGGGACTAAATTGTTACAAATCAAAGTTCAGACATTAAATTGTTACTTTCATGAAAGTTTAGGGACGAAAAGTGAATTTTAACCTTATTTAATTTTGATATTATTTTGAATATCTTGAATTTATTTTAAGGTGATATTCAAGCAATGAAAAACGAGCAAAAGGAAGATGAAATGGAATTCAAACATGGGGTTCAAAGGTTAAGAAAATGAAAATAAATGACGGGGTCAGGAAGCGCAAATGCCTCCCGTTGGCATACAATATTTCAAACCAATTAGAAATTGCACGTCATTATTTTTAATGACAACGTATTTTTATTTAATTTTGGGGTGTGTCACAAATTAACACATATATCAAAATTAATTATGGCAAAATAAGAAAGGTCAGTGTCCTCTTTGTGGTCGTCTAATTTCATGGGATTCGATGGTTAAACTCAAGATCGAATGATCATTTAGCCTAAAATTCAATTTAGCCTTAGTTCATGAAGTTAAATTAAAATGTGTTAAGTTCATAAAGTTAGGTTAAATTGTGTTCAATTTAAATTCAAGATAGTTAAGGTAATTGGGTTTGAAGCCCAAAATTCATCCAAGCCCATGGATGGGGCCAAGCCCATGAAGGCCTTCTAAAAACCTATAAATAGGGAGGCTTGGCCTTCATGAAAGGGGACGGAAAGAAAAATGAGAGAATGAAGATTGAAGCTCTCTATAAGACTTAATGGAGATTGAAGCTCTCTATAAGACTCAGAAGATTGAAGCTCTAATCCTCTAACAAGACTCTGAAGGTAAAAGCCTCTGCAAGACTCTGAAGATTGAAGCTCTAATCCTCTTGCAAGACTCATAAGATTGAAGCTCTTTACAAGACTCTAAAGATTGAAGCTCTAATCCTCTTGCAAGACTCTGAATATTGAATCATCTACAAGACTCTGAAGACTGAATCTCAGATATTTCTGCAACACTGAAGATCGAAGCCCAGATCCTCCTACAAACTTGAAAATTGAAGTGAAGTCCTTCTAAAGATTAGAAGACTGAAGGCCTGAAGCCATAAGTCTACTTCAATCCATCCAGGAAAATTCAAATCCTTCAAAGACGAACAAACCTTCAAGACTCTGAAGATTAAAGCTTCTTGAAGACTGTATAGATCAAAGCTACCTTGAGTTTGTGAGAGAAAACATCAAAGGATTGTAAATAGAGATTGTATTCCACTATACTTACACAAGAATTAATACATACTAGAAGTCGTATCACGAATCACATTTCTCTCCTGAAATCTCGTGTGAACAGTTTGACACGCCTAGTGAGACCTCTCTACCTTTCATCTCATTCTATCATCCAGATCTATGGAAAAAAAGGTCTAAAGAAGCGATGGCAACCAAGAAAGTTACTTCCAAGACTTCAAGCAACTCTTATGTGGGACAATTTACTCGCGGATGCTCTAAGGAAATCTAGAAATCAAAAGAAGAACAAGCCTCTGTCATTGCAAATATGATATGGACCCAAATGGTAGAGCCAAACCAATGCGGGTTGTCTTGCAGGAAATTCCTTTATTTGAGGATTCTTCTTCATCTTCTGAAAAGGCAAAAGAGACATCAGATCCTGACATGATGTCTGTAATGATGGCGGACATAGGTACAAACGAAGAAAGAATGACTAAACTGGAAAGGATGGTCAACATGCGGATGAAGGTGGTTGAAAAGAGAGATTATGAAATTGCATCTCTAAAGAATTACATAGAAAGTCTGTTGGGTTTTATGTTCTAA ATGAGCCTGGACTGCCAAGTCTACCTCACCCCATCTGGTTCGAGCCCATACACTTCATTTGAGACAGACTCACCTGGCCTAAGCCGAGGCCGACCCCAAACCTTAAAGGTAATTTTGGACCACTCCGATGTACAAGGAGCTGACGAGGAAAACCAGGCAGAAATAGAGCTGGAAGATGGACCCCAGAGGCGAAACGAGCCAATAGGTCGGGCAAAGACCGAAGGGGTCAGACTTTCGACCCGACCCCTACTCGGCCTCGGCCATGGTCAAGGCCGAGCTCGATCGCCTTCGTTTGGGACCCGAACTCTATTCTCTGACCCTCCTCTTGCTCTTACTTTCCTGCTTCCCATCGTCCTTCTTGCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGTTTACTGTCTTGTAGGCCACACCTTCCCTCCTCACAAACAAATTTATCGTTGGTGGCACGTGAAGGCCAGGAAATTCCTTTATTTGAGGATTCTTCTTCATCTTCTGAAAAGGCAAAAGAGACATCAGATCCTGACATGATGTCTGTAATGATGGCGGACATAGGTACAAACGAAGAAAGAATGACTAAACTGGAAAGGATGGTCAACATGCGGATGAAGGTGGTTGAAAAGAGAGATTATGAAATTGCATCTCTAAAGAATTACATAGAAAGTCTGTTGGGTTTTATGTTCTAA ATGAGCCTGGACTGCCAAGTCTACCTCACCCCATCTGGTTCGAGCCCATACACTTCATTTGAGACAGACTCACCTGGCCTAAGCCGAGGCCGACCCCAAACCTTAAAGGTAATTTTGGACCACTCCGATGTACAAGGAGCTGACGAGGAAAACCAGGCAGAAATAGAGCTGGAAGATGGACCCCAGAGGCGAAACGAGCCAATAGGTCGGGCAAAGACCGAAGGGGTCAGACTTTCGACCCGACCCCTACTCGGCCTCGGCCATGGTCAAGGCCGAGCTCGATCGCCTTCGTTTGGGACCCGAACTCTATTCTCTGACCCTCCTCTTGCTCTTACTTTCCTGCTTCCCATCGTCCTTCTTGCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACCACACCGGTGTGCAGTTTACTGTCTTGTAGGCCACACCTTCCCTCCTCACAAACAAATTTATCGTTGGTGGCACGTGAAGGCCAGGAAATTCCTTTATTTGAGGATTCTTCTTCATCTTCTGAAAAGGCAAAAGAGACATCAGATCCTGACATGATGTCTGTAATGATGGCGGACATAGGTACAAACGAAGAAAGAATGACTAAACTGGAAAGGATGGTCAACATGCGGATGAAGGTGGTTGAAAAGAGAGATTATGAAATTGCATCTCTAAAGAATTACATAGAAAGTCTGTTGGGTTTTATGTTCTAA MSLDCQVYLTPSGSSPYTSFETDSPGLSRGRPQTLKVILDHSDVQGADEENQAEIELEDGPQRRNEPIGRAKTEGVRLSTRPLLGLGHGQGRARSPSFGTRTLFSDPPLALTFLLPIVLLADLSIGGGVASTTPVCSLLSCRPHLPSSQTNLSLVAREGQEIPLFEDSSSSSEKAKETSDPDMMSVMMADIGTNEERMTKLERMVNMRMKVVEKRDYEIASLKNYIESLLGFMF Homology
BLAST of Lag0026176 vs. NCBI nr
Match: KAA0039052.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 73.6 bits (179), Expect = 2.6e-09 Identity = 38/70 (54.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0026176 vs. NCBI nr
Match: KAA0050708.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK01442.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-08 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of Lag0026176 vs. NCBI nr
Match: KAA0041883.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK05406.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-08 Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Lag0026176 vs. NCBI nr
Match: KAA0051994.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK04565.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-08 Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of Lag0026176 vs. NCBI nr
Match: KAA0043179.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK12286.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 70.1 bits (170), Expect = 2.9e-08 Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Lag0026176 vs. ExPASy TrEMBL
Match: A0A5A7T6D4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001460 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 38/70 (54.29%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Lag0026176 vs. ExPASy TrEMBL
Match: A0A5A7U601 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00290 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 8.2e-09 Identity = 37/63 (58.73%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of Lag0026176 vs. ExPASy TrEMBL
Match: A0A5D3C4W1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00920 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-08 Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 0
BLAST of Lag0026176 vs. ExPASy TrEMBL
Match: A0A5A7U9H0 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001980 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08 Identity = 37/70 (52.86%), Postives = 55/70 (78.57%), Query Frame = 0
BLAST of Lag0026176 vs. ExPASy TrEMBL
Match: A0A5D3CPF1 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00500 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-08 Identity = 38/70 (54.29%), Postives = 54/70 (77.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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