Lag0026139 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0026139
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr10: 30287275 .. 30287925 (-)
RNA-Seq ExpressionLag0026139
SyntenyLag0026139
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCGATGGCTGAAAATAAATGATTTTGCGTCGTTATCGGAGCTGGAATTGATTGCAGTCACAAGCTGGTCAATTTGGAGCGACAGAAACAAGAAGGTTCATGGTCAGAGTATTCTGCCAATTAATACGAAAAACAGCTGGATAAATAATTATCAAAGGATTTTTTTGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTTTGAGAAGAAATCTCGAGTCGGAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCCGTCAACGGGGTTGGGGGCAATTATCAGAGTTTCCATGGGCAACATAGTTGGAGCTTCGACTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGCAGAAGTGATGACAATCTTCGAAGGAGTATCGCTTGCTAAGTTTTTAGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGCAATTAATTTGGTTGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAACTAAGAGGGCTAAGAATGCTTAA

mRNA sequence

ATGGATCGATGGCTGAAAATAAATGATTTTGCGTCGTTATCGGAGCTGGAATTGATTGCAGTCACAAGCTGGTCAATTTGGAGCGACAGAAACAAGAAGGTTCATGGTCAGAGTATTCTGCCAATTAATACGAAAAACAGCTGGATAAATAATTATCAAAGGATTTTTTTGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTTTGAGAAGAAATCTCGAGTCGGAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCCGTCAACGGGGTTGGGGGCAATTATCAGAGTTTCCATGGGCAACATAGTTGGAGCTTCGACTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGCAGAAGTGATGACAATCTTCGAAGGAGTATCGCTTGCTAAGTTTTTAGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGCAATTAATTTGGTTGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAACTAAGAGGGCTAAGAATGCTTAA

Coding sequence (CDS)

ATGGATCGATGGCTGAAAATAAATGATTTTGCGTCGTTATCGGAGCTGGAATTGATTGCAGTCACAAGCTGGTCAATTTGGAGCGACAGAAACAAGAAGGTTCATGGTCAGAGTATTCTGCCAATTAATACGAAAAACAGCTGGATAAATAATTATCAAAGGATTTTTTTGGATGCAAACTCAAGAAGAGCTGAAAATTTACCTTTGAGAAGAAATCTCGAGTCGGAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCCGTCAACGGGGTTGGGGGCAATTATCAGAGTTTCCATGGGCAACATAGTTGGAGCTTCGACTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGCAGAAGTGATGACAATCTTCGAAGGAGTATCGCTTGCTAAGTTTTTAGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGCAATTAATTTGGTTGCAAAGAAAACTGAAGTTTGGGGTGAGGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAACTAAGAGGGCTAAGAATGCTTAA

Protein sequence

MDRWLKINDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDANSRRAENLPLRRNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGITKRAKNA
Homology
BLAST of Lag0026139 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 2.8e-18
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 0

Query: 1    MDRWLKINDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDAN 60
            ++ W  + +     +L L A+T W IW+DRN  +HG+ + P+  K  W+      FLD++
Sbjct: 1216 LELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTP----FLDSH 1275

Query: 61   SR-RAENLPLR--RNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIV 120
            S+ +  N   R   N    +  W P S    K+N DAA   +  ST  G IIR S  ++V
Sbjct: 1276 SQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGA--STSFGCIIRDSSCSLV 1335

Query: 121  GASTFSVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVE 180
             A++  V       +AE+  I EG+  A       + VESD   AI L+  +    G+ +
Sbjct: 1336 AATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQ 1395

Query: 181  PWLEAIWDQLTFFSNVIFVYTSRKKNGVADGITK 212
             W+  I      F+ + F ++SR+ N  A G+ K
Sbjct: 1396 NWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAK 1423

BLAST of Lag0026139 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-16
Identity = 64/204 (31.37%), Postives = 102/204 (50.00%), Query Frame = 0

Query: 14   SELELIAVTSWSIWSDRNKKV-HGQSILPINT---KNSWINNYQRIFLDANSRRAENLPL 73
            S+LEL+    WS W  RNK +  G+ + PI +     S +  +QR+      R+ +   +
Sbjct: 1170 SDLELMVALCWSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRV------RKPQQSHI 1229

Query: 74   RRNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKIDYK 133
              +++ +   W+PP  N++KVNVDAA+ S   S G+GA+IR S G IV A      +   
Sbjct: 1230 SISIKEKQQEWLPPPQNVFKVNVDAAFNSKNLSAGVGAVIRDSNGKIVAAGVNQNLLKGS 1289

Query: 134  APIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQLTF 193
            A +AE   +  G+ LA+      +I+ESDC + + LV        E+   + AI +Q+  
Sbjct: 1290 ASLAEAEAVLWGLQLARNADVSSLIIESDCLEVVQLVNNTKGSRSEIFWTILAIQNQMKI 1349

Query: 194  FSNVIFVYTSRKKNGVADGITKRA 214
            F  V+  +  R  N  A  + K A
Sbjct: 1350 FQKVVVNHIPRHCNACAHYLAKIA 1367

BLAST of Lag0026139 vs. NCBI nr
Match: XP_022158489.1 (uncharacterized protein LOC111024968 [Momordica charantia])

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-16
Identity = 63/200 (31.50%), Postives = 103/200 (51.50%), Query Frame = 0

Query: 12  SLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNY-QRIFLDANSRRAENLPLR 71
           S SEL L  +T W++W+DR+  ++ + I     K  WI  Y + + +  ++     +P  
Sbjct: 5   STSELRLTGITCWALWNDRDALINKKKIPEALIKVEWILKYAEEVRMKYHNGMKRRIP-- 64

Query: 72  RNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKIDY-- 131
                 ++ W PP G + K+N DAA   S   +G+G ++R     IVGA      +D+  
Sbjct: 65  -----RVNEWRPPLGGVVKMNTDAA--VSEEGSGVGVLLREGNAEIVGA-----MVDFHM 124

Query: 132 -KAP-IAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQ 191
            K P +A+++ I EG+SLA  LG   ++VE+D  +A+NL+  K+   GE   W+E I   
Sbjct: 125 VKTPLLAKILAIREGLSLATRLGVHRVVVETDSLEALNLIGDKSPWKGEAVSWVEDIRAF 184

Query: 192 LTFFSNVIFVYTSRKKNGVA 207
              F  + F +  R+ N VA
Sbjct: 185 ARDFQEICFQHVFRESNAVA 190

BLAST of Lag0026139 vs. NCBI nr
Match: XP_022131661.1 (uncharacterized protein LOC111004786 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 2.0e-16
Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 0

Query: 1   MDRWLKINDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDAN 60
           MD WL + D  +  + +L A T W+IW DRN   HG S+     + +WI++Y + +  A 
Sbjct: 37  MDIWLLLYDKLNPQQRDLAAFTXWAIWCDRNSXAHGSSVSTPALRCNWISSYFQNYSQAQ 96

Query: 61  SRRAENLPLRRNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGAS 120
             +  + P + ++      W+PP  +  KVN DAA  S+  STGLG IIR   G ++ A 
Sbjct: 97  ENKRIS-PQQSSVPPPSCRWLPPRDSAMKVNSDAACRST--STGLGLIIRDHFGVLLVAK 156

Query: 121 TFSVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLV 167
           +  + +      AE+  I E + LA       ++VESDC +AI LV
Sbjct: 157 SMFLPMPLNPLFAEIRGILEALKLAASRSYTRLVVESDCQEAIRLV 199

BLAST of Lag0026139 vs. NCBI nr
Match: XP_038902513.1 (uncharacterized protein LOC120089172 [Benincasa hispida])

HSP 1 Score: 95.5 bits (236), Expect = 5.9e-16
Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0

Query: 80  WIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKIDYKAPIAEVMTIF 139
           W  P  +  K+NVDAAW  SP S+G  AIIR + G++      S+   Y  P+AE   + 
Sbjct: 56  WSTPPTSFIKLNVDAAWKFSPYSSGFSAIIRDNQGSLKVVQISSIDAVYPPPLAEAFVVL 115

Query: 140 EGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQLTFFSNVIFVYTS 199
           +G+ L   +  K+IIV+SDCS AI+L  K       V  WLE IW+    F  + F Y  
Sbjct: 116 QGLRLTSKMNFKKIIVKSDCSGAIDLFLKILISDSSVRVWLEEIWEISIVFYPINFAYIP 175

Query: 200 RKKNGVADGITKRAK 215
           R  N +AD + KR +
Sbjct: 176 RNINKLADIVAKRTR 190

BLAST of Lag0026139 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.4e-18
Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 0

Query: 1    MDRWLKINDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDAN 60
            ++ W  + +     +L L A+T W IW+DRN  +HG+ + P+  K  W+      FLD++
Sbjct: 1216 LELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTP----FLDSH 1275

Query: 61   SR-RAENLPLR--RNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIV 120
            S+ +  N   R   N    +  W P S    K+N DAA   +  ST  G IIR S  ++V
Sbjct: 1276 SQAQMSNYSPRTQSNHRPVVQYWRPSSSVSLKLNTDAACRGA--STSFGCIIRDSSCSLV 1335

Query: 121  GASTFSVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVE 180
             A++  V       +AE+  I EG+  A       + VESD   AI L+  +    G+ +
Sbjct: 1336 AATSIRVPFPLSPLLAEIRCILEGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQ 1395

Query: 181  PWLEAIWDQLTFFSNVIFVYTSRKKNGVADGITK 212
             W+  I      F+ + F ++SR+ N  A G+ K
Sbjct: 1396 NWVMEIQALTCCFAFISFSHSSRQCNRAAHGLAK 1423

BLAST of Lag0026139 vs. ExPASy TrEMBL
Match: A0A6J1DZK3 (uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024968 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.6e-17
Identity = 63/200 (31.50%), Postives = 103/200 (51.50%), Query Frame = 0

Query: 12  SLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNY-QRIFLDANSRRAENLPLR 71
           S SEL L  +T W++W+DR+  ++ + I     K  WI  Y + + +  ++     +P  
Sbjct: 5   STSELRLTGITCWALWNDRDALINKKKIPEALIKVEWILKYAEEVRMKYHNGMKRRIP-- 64

Query: 72  RNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKIDY-- 131
                 ++ W PP G + K+N DAA   S   +G+G ++R     IVGA      +D+  
Sbjct: 65  -----RVNEWRPPLGGVVKMNTDAA--VSEEGSGVGVLLREGNAEIVGA-----MVDFHM 124

Query: 132 -KAP-IAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQ 191
            K P +A+++ I EG+SLA  LG   ++VE+D  +A+NL+  K+   GE   W+E I   
Sbjct: 125 VKTPLLAKILAIREGLSLATRLGVHRVVVETDSLEALNLIGDKSPWKGEAVSWVEDIRAF 184

Query: 192 LTFFSNVIFVYTSRKKNGVA 207
              F  + F +  R+ N VA
Sbjct: 185 ARDFQEICFQHVFRESNAVA 190

BLAST of Lag0026139 vs. ExPASy TrEMBL
Match: A0A803PIB6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 8.4e-16
Identity = 64/212 (30.19%), Postives = 98/212 (46.23%), Query Frame = 0

Query: 2    DRWLKINDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDANS 61
            D  L ++   + SELE +  T W IWSDRN  +H + +      +S    Y   F    S
Sbjct: 1596 DYLLFLSTILTKSELEKLFCTMWFIWSDRNNYIHCKQLKHPMAISSQAEAYLANFHSVKS 1655

Query: 62   RRAENLPLRRNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGAST 121
              A  +      ++    W+PP+ +  K+NVDAA  SS    G+G IIR S G ++ A +
Sbjct: 1656 ATAPAVSCVA-ADARTVKWVPPTESNLKMNVDAALDSSRNKIGIGVIIRDSTGRVIAAMS 1715

Query: 122  FSVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLE 181
              V  ++K+   E   +F G+  AK L  +   VE+DC   ++ +  K          +E
Sbjct: 1716 KPVVGNFKSQEMEAKAMFWGLQWAKQLQLQPHCVETDCLMLVHALQGKQSQLSSFHDLVE 1775

Query: 182  AIWDQLTFFSNVIFVYTSRKKNGVADGITKRA 214
             I   L+ FSN    +  R  N  A G+ K+A
Sbjct: 1776 DISYHLSSFSNACISHVRRDANQAAHGLAKQA 1806

BLAST of Lag0026139 vs. ExPASy TrEMBL
Match: A0A1R3H2R0 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_21633 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.4e-15
Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 0

Query: 8    NDFASLSELELIAVTSWSIWSDRNKKVHGQSILPINTKNSWINNYQRIFLDANSRRAENL 67
            N  A L  L+ + +T W +W +RN+  H Q+    +  ++ I  + R       +     
Sbjct: 1566 NKAAQLGSLDRVFLTLWVLWGNRNRCYHDQTCATRSKLSATIEFHLRQVSRIQGQGQRTE 1625

Query: 68   PLRRNLESELHCWIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTFSVKID 127
              RR +      W PP+  + KVNVDAA+ +     GL A+ R S G ++ +     +  
Sbjct: 1626 THRREI-----VWTPPAEGIAKVNVDAAFVNPQDGAGLAAVARDSNGEVLCSVAAKDRFV 1685

Query: 128  YKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEAIWDQL 187
              +  AE+ T+  GV +A+  G    ++ESDC   +  + KK  V  E +  LE I D  
Sbjct: 1686 KDSLYAEIFTVCLGVLMARQEGFNHCVIESDCLMVVLALNKKGRVSWEGDCVLEEIRDLA 1745

Query: 188  TFFSNVIFVYTSRKKNGVADGITKRA 214
            +FF ++ FV+  R+ N  A  + K A
Sbjct: 1746 SFFDSISFVHVKREANVCAHSLAKHA 1766

BLAST of Lag0026139 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-15
Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 0

Query: 9   DFASLSELELIAVTSWSIWSDRNKK----VHGQS-ILPINTKNSWINNYQRIFLDANSRR 68
           D A   E     + +W IW  RNK     VH ++  + +      IN+  R         
Sbjct: 2   DKAGEEERRRSMIIAWQIWEMRNKSIFKGVHPETRDIQLAIDRYIINSAGRNTNLKGKST 61

Query: 69  AENLPLRRNLESELHC-WIPPSGNMWKVNVDAAWTSSPPSTGLGAIIRVSMGNIVGASTF 128
            ++L L R +E      W PP+ N WK+N +AAW +   + G+G I+R   G ++ AS  
Sbjct: 62  NKDLHLIRRIEDNTGAQWKPPTSNSWKLNTNAAWRADTNTGGIGWILRDEKGEVIKASCR 121

Query: 129 SVKIDYKAPIAEVMTIFEGVSLAKFLGCKEIIVESDCSQAINLVAKKTEVWGEVEPWLEA 188
            ++ +      EVM I EG+   +   C+ I +ESD  +AI+L+ ++ +   E+   LE 
Sbjct: 122 IIRAERNITYLEVMAICEGLRAIRQEHCRPIHLESDSLEAIHLLHRQCQDQTEIIWLLEE 181

Query: 189 IWDQLTFFSNVIFVYTSRKKNGVADGITKRA 214
           IW  +     V   + SR+ N VA G+ +RA
Sbjct: 182 IWQMMKDMEIVSMRHISREANKVAHGLARRA 212

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.12.8e-1830.37uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_024950112.11.6e-1631.37uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_022158489.11.6e-1631.50uncharacterized protein LOC111024968 [Momordica charantia][more]
XP_022131661.12.0e-1634.34uncharacterized protein LOC111004786 [Momordica charantia][more]
XP_038902513.15.9e-1638.52uncharacterized protein LOC120089172 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX301.4e-1830.37uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DZK37.6e-1731.50uncharacterized protein LOC111024968 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803PIB68.4e-1630.19Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A1R3H2R01.4e-1528.64Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_21633 PE=4 SV... [more]
A0A6J1CP261.9e-1529.86uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 86..215
e-value: 4.8E-12
score: 48.1
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 91..213
e-value: 1.9E-18
score: 66.5
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 77..214
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 77..214
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 90..211
e-value: 2.97262E-20
score: 80.436
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 86..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0026139.1Lag0026139.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity