Lag0024950 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024950
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein yippee-like
Locationchr10: 7215968 .. 7219958 (-)
RNA-Seq ExpressionLag0024950
SyntenyLag0024950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTCTTGCCGATGACGTCCTCTCTCGGGTACTTTCACTCTTTACCTCATCCCTTTTATTTGCTCTCGGAATTCTTTCTTTCTTCCTCTGCGATTAATTTCGCCCAGATATTCTAGAATTTTGTTTGTTCAGATTGTAGAATTGGATTTCTGAACAAATTGGAGTGGGAACGGGAGTTTATTTTGTCCTCGAATTGTAGGTTTGCTCGAAGACAGATTGTTTTCGCTTGTATTAGCGTTATGCTTTCCTTATGTATCGCGGTTGCTGATTTAATCGATGTTTCGTTCAAATTTGCGGATTCCAATTTTGCCTTTTCAGCCAAGTATTGCTAATTGAAATATCAATCATATTTCGGTTGCATGGTTAATTTGCCACTACTTGGAGGTAAACTGATGCTACGAGTCTCAAATGCTAAGTTGGAATTGCAATTTCTAGGATATCACGATCAATATCTTATTGTATTTTGTCATTTGTCGATTTCAATTTTGAGAATGCAATATGAAGCTACTTTTTACGTTTTTAGATTTTGGTTAATCTTTATGCTGCTTATTATCATAATATTGTTTGTGTAGCTCGCTCTTTTTGCATATTTAATCGACCATGAAGTTAACATTACCCATTTTGATGAATTTTTATTGGTCTATTATTGTCCCAGACTTTCAATTGCAGCCAAGGGAGGGCTTACCTTTTCAGCAATGTGTAAGTAGCCCTGTTGTTATGTTCATTACATTTTCATGTCCAGCCTCAAATCCAAATGTCTAGATTATTTGGGAGGCACCATCTGATGACTGATGAGGACCCCTGTAGGAGGAGGGGATTTGTTTTACTTCCCTCTAGAATCTGATTTCTCTAGCATCACAATATCTGTATATGGAAATTTCTTGTTATGGTTCAGACTTTTACGTTTTACCAATATTTTTAAGCAGTCTTCAATCTTCATAATTCAGAATTCACAGTATACTGCCTTGTATACTATGTTTATTTTCCTCAATTTTTTTTTCTTATCCCCCTTCTCTTTTCTTGTGCATTTCTGTTGTACAAACATTGAGATGAAATGACATTATTTTGATCTGTTTCTGACCTCACATCTACATAACAAATTGAGATACTTTTACCTTCTGCCAGTGTGAATGTAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCGGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGTGGACAAATTCTGGGATGGAAATATGTAAGCTTTCTTCTCTATCTATCTTTCGAAAGTGGTCTGATTTCCACCATCTTTAATAAAACTGATGACTGTTTAGTTGTATTAATCATGAACTGGCTCAACGGTCAAAGGAGCAAGTTATAGACTTGGATATTGAAGTTCGTGTTTCTCTTATCAACTACCTATCCCATGCATATTTCAACTTGCAAAATTATAAGATCAAGATAATCCCCCGAAACTAGTTTAGGTGAACAGAAGTTGGTTTGAATCCCTCAAGTAGCAAAGGTGAACAGAAGTTGGTTTGAATCCCTCAAGTAGCAAACGTATTATTAATAGCAATAATCTTTAAAGAATGGACATAGATTCATGGATATGATAACATTTTATTCTATTTTGGATTAGGAAACATTGATAGAATATATTGGAATATCATGAGTTCCTCCTCCATTCGTTGTTCGTTGTTTTGTGATAAGGGGAGGTTTTTATTGCTTGCTAGAGTGTGCTTTATTGTGGGGATTATGGGATGAGAGGAATAATAGAGCGTTTCGGGGTCTTGAGAGGGACCCATCTGATTTGTGGGCCCTCTTAGTTTCTATGTTTCTCTTTGGGCCTCGGTTTCCAATCTTTTTGTAATTATTCTCTAGGTACTAGTATGCCTAATTGGCGCCCCTTTCTTTAGAGGGGGATCTCTTTTGTGGGCTGGTTTTTTTGTATGCCCCGTGTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTCAATGAAAACTGGTATTTTCATTTTAAGAAAAAAAAAAGTTCAATTTTATCCTTGTGAAAGATAACCCAGTAGAATAACTGCATACAGAGAAAAAAAAAAAAAGGAAAAAATAACACTCGTGGATGAAGCCAACATGAGCATAGATTAGTAGTTAAGACATCTCTAAGAGGTCATAAGTTTGTATCCCCCTACTTCCATTGATGTAATATACTAGAAAATCTCTTGGAAGGAAAAGAGCGCAGGCACTTTTTGTATTAAAAAAACACAATAAAATCCTATTTTATCTGAAATTTTGAAAAAAAAAAAAAAAAGGAAAACTGTAGTGTCATATGCTTGAATGCTGGACTTCTGAAAATCCAAATTTTGGGAGAGGTAGGGGGTGGGACTTCTGAAAATGCAACTATAGGCTCAATCTGCCGTTGCCCCTTATGATGCCTTTTGGGCTGATCTATACCCAAAGAAAATAAAATTCTTTTTGCGGGAGCTTTCCCATAGAGGTGTCCTTACAGAAGACAAACTACAGCATCACCTCCCTCCCATGGCTCTATCTCCCTGTTGGTGTGCCCTGTGCAACAACGATAGCGAGCCACAAAGTCACTTATTCTACCACTGCCCATTCGCTTACAGATCTCTGCCTCAACTTATGCAGCTAAATATGGCCAGGTTCCTAGCATTTAAGCAGGAGTTACCATACTGAGCGTCAAAAAAATATATCTTCTTCATTGCTACTGGACAGGATGAATAGAAAGCTTCTCTGATATGTGTATGTGTATGGTTGTGATAAAACCTTTAATATGCTTGAATCACCAAATTGCATTAAACCACAGTTGAGAATGGTGTAATTTATCGTTTGTATCTAAAAACATTTGTGGGTTTGTGTTTTTATGAAAAGATTTTCTGCTGACTTGTTGACTTGCAGTCTTAGATTGCTAAACTGATGTTGCTGCACTTCAATAGGTAACTACACATGACAAATACCAAAAATACAAGGAGGGGAAATTTGTTCTTGAGAGGTACTCGGACATTTTCATTATCTTTATCTTTCCAAAAAACATAAGGTTTACTATTAATATACTATTAGTCCTGAGTTTATTTATACCACTAACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAAGCTAATCCTGGTTCAAGCGATATGGAAAATCCTTAGTGAGTTTCTGCCATATTTCTCTGAATAAGGAAATTGAAGCGTACATGTCAAAGTGTTGTATGTGTAGAAACAATTCTAGAGGCTGTAGAACTACTATTGAAGTGCATGACCATAACCTATAATATCATAAGCTTTTAATGGAATCCTGTCTTGAATGCTTGATTCTCCCCTCTTACAATCCCTTTTCACATAGTAAGAACCTTCTTCTTCTTCTCCGTTTGAAGTAAAGGAAGGGCGTTACCAAGTAAATGGATGGTTCTTATACTTGTAAAGTTGAACTATGCAGACATGAATTCAAAGAAACGAGTTTCACAACCCAATCACAATACCAAACATCATATTAATCGTTCTAAACATATTGATGCACACTTCAAACACTAAATCAGACAAATTCAAATTTACTATTTCATGTTGTGTCTTCTGTAAAGTTGATGACAAGAAAAGGAAAAAAGAGGAACTATTTGCGTTTGATATTATAATATATTGTTGATTGTATGGTGGTTTGAGGATTCAGTGGGAAAGGAAAGCACAAGCAGCCATTGGAAAAGGAAAAGGAAAAGGAAAAGGGCGTTGGATGAAAAAACACCATAAATTGTTTTGCAGTAGAAGCTCATGATTAGCTTTTTAGACGGACAGGAGATGGCCCACAGGTTCGATGGTCGATATTGTCACTGCCTCAATTTTACCTGCCGTGTTGACTAACAAGAATAAAGAGGCAAAAGGGGCCGCATTGAGCCGTCTTGCTTTGCTTGCTTGGCTTCTCGGCATAGCCCGCCGTACACGACGAGTTGGACTGCGGCCGGCTCCTCATTTAAAACGCTATCGGTAA

mRNA sequence

ATGTTGCTCTTGCCGATGACGTCCTCTCTCGGGTTTGCTCGAAGACAGATTGTTTTCGCTTGTATTAGCGTTATGCTTTCCTTATGTATCGCGGTTGCTGATTTAATCGATGTTTCGTTCAAATTTGCGGATTCCAATTTTGCCTTTTCAGCCAATGTGAATGTAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCGGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGTGGACAAATTCTGGGATGGAAATATGCTCAATCTGCCGTTGCCCCTTATGATGCCTTTTGGGCTGATCTATACCCAAAGAAAATAAAATTCTTTTTGCGGGAGCTTTCCCATAGAGGTGTCCTTACAGAAGACAAACTACAGCATCACCTCCCTCCCATGGCTCTATCTCCCTGTTGGTGTGCCCTGTGCAACAACGATAGCGAGCCACAAAGTCACTTATTCTACCACTGCCCATTCGCTTACAGATCTCTGCCTCAACTTATGCAGCTAAATATGGCCAGGAGATGGCCCACAGGTTCGATGGTCGATATTGTCACTGCCTCAATTTTACCTGCCGTGTTGACTAACAAGAATAAAGAGGCAAAAGGGGCCGCATTGAGCCGTCTTGCTTTGCTTGCTTGGCTTCTCGGCATAGCCCGCCGTACACGACGAGTTGGACTGCGGCCGGCTCCTCATTTAAAACGCTATCGGTAA

Coding sequence (CDS)

ATGTTGCTCTTGCCGATGACGTCCTCTCTCGGGTTTGCTCGAAGACAGATTGTTTTCGCTTGTATTAGCGTTATGCTTTCCTTATGTATCGCGGTTGCTGATTTAATCGATGTTTCGTTCAAATTTGCGGATTCCAATTTTGCCTTTTCAGCCAATGTGAATGTAACATCTGGACCCAAGGAGGAGAGGTTGATGCTTTCGGGTATGCACACTGTGGAAGATATCTTTTGTTGCTGTTGTGGACAAATTCTGGGATGGAAATATGCTCAATCTGCCGTTGCCCCTTATGATGCCTTTTGGGCTGATCTATACCCAAAGAAAATAAAATTCTTTTTGCGGGAGCTTTCCCATAGAGGTGTCCTTACAGAAGACAAACTACAGCATCACCTCCCTCCCATGGCTCTATCTCCCTGTTGGTGTGCCCTGTGCAACAACGATAGCGAGCCACAAAGTCACTTATTCTACCACTGCCCATTCGCTTACAGATCTCTGCCTCAACTTATGCAGCTAAATATGGCCAGGAGATGGCCCACAGGTTCGATGGTCGATATTGTCACTGCCTCAATTTTACCTGCCGTGTTGACTAACAAGAATAAAGAGGCAAAAGGGGCCGCATTGAGCCGTCTTGCTTTGCTTGCTTGGCTTCTCGGCATAGCCCGCCGTACACGACGAGTTGGACTGCGGCCGGCTCCTCATTTAAAACGCTATCGGTAA

Protein sequence

MLLLPMTSSLGFARRQIVFACISVMLSLCIAVADLIDVSFKFADSNFAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQSAVAPYDAFWADLYPKKIKFFLRELSHRGVLTEDKLQHHLPPMALSPCWCALCNNDSEPQSHLFYHCPFAYRSLPQLMQLNMARRWPTGSMVDIVTASILPAVLTNKNKEAKGAALSRLALLAWLLGIARRTRRVGLRPAPHLKRYR
Homology
[Close]
BLAST of Lag0024950 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. NCBI nr
Match: XP_038893524.1 (protein yippee-like At5g53940 [Benincasa hispida])

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. NCBI nr
Match: KAG6583979.1 (Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47  FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
           + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 233 YLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 274

[Close]
BLAST of Lag0024950 vs. NCBI nr
Match: XP_022955197.1 (protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955199.1 protein yippee-like At5g53940 isoform X2 [Cucurbita moschata] >XP_022994493.1 protein yippee-like At5g53940 isoform X1 [Cucurbita maxima] >XP_022994495.1 protein yippee-like At5g53940 isoform X2 [Cucurbita maxima] >XP_023543017.1 protein yippee-like At5g53940 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543018.1 protein yippee-like At5g53940 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573285.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012450.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-13
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Sbjct: 28 DILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKY 83

[Close]
BLAST of Lag0024950 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia])

HSP 1 Score: 85.9 bits (211), Expect = 5.2e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VNVT+GPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          DL+  SF       + F+ +VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY
Sbjct: 28 DLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.5e-10
Identity = 28/42 (66.67%), Postives = 33/42 (78.57%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VNVTSG  E R+M++GMHTV DIFC CCG I+GWKY
Sbjct: 42 YLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match: Q8S5M8 (Putative yippee-like protein Os10g0369500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0369500 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 22/45 (48.89%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQS 92
          + F   VN++ GP E+R +++G+HTV+DI+C CC QILGW+Y ++
Sbjct: 51 YLFDHVVNISLGPNEDRYLMTGLHTVKDIYCSCCQQILGWRYEKA 95

[Close]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match: Q6NWI4 (Protein yippee-like 3 OS=Danio rerio OX=7955 GN=ypel3 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-08
Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0 

Query: 34  DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKYAQSA 93
           DLI  SF+ +    + F++ VNV  GP EERL+L+G+H V DI+C  C   LGWKY Q  
Sbjct: 35  DLISKSFQGSQGRAYLFNSVVNVGCGPAEERLLLTGLHAVADIYCENCHTTLGWKYEQ-- 94

Query: 94  VAPYDAFWADLYPKKIKFFLRELSH 118
                AF      K+ KF + ELSH
Sbjct: 95  -----AFELSQKYKEGKFII-ELSH 111

[Close]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.0e-08
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0 

Query: 26 LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQIL 85
          L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +
Sbjct: 23 LALC---DDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYV 82

Query: 86 GWKY 89
          GWKY
Sbjct: 83 GWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VN+TSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNITSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match: A0A6J1K1C3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Sbjct: 28 DILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match: A0A6J1GSW9 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-13
Identity = 38/56 (67.86%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          D++  +F  +    F F++ VNVTSGPKEERLMLSGMHTVEDIFCCCCG++LGWKY
Sbjct: 28 DILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKY 83

[Close]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.5e-13
Identity = 37/42 (88.10%), Postives = 39/42 (92.86%), Query Frame = 0 

Query: 47 FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          + FS  VNVT+GPKEERLMLSGMHTVEDIFCCCCGQILGWKY
Sbjct: 42 YLFSNVVNVTAGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 83

[Close]
BLAST of Lag0024950 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 75.5 bits (184), Expect = 6.5e-14
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          DL+  SF       + F+ +VN++ GP EERLMLSGMHTV DIFCCCCGQ +GWKY
Sbjct: 28 DLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKY 83

[Close]
BLAST of Lag0024950 vs. TAIR 10
Match: AT3G11230.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0 

Query: 26 LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQIL 85
          L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +
Sbjct: 23 LALC---DDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYV 82

Query: 86 GWKY 89
          GWKY
Sbjct: 83 GWKY 83

[Close]
BLAST of Lag0024950 vs. TAIR 10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-09
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = 0 

Query: 26  LSLCIAVADLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQIL 85
           L+LC    D++  SF+      + FS  VNV +G KE+R+M++GMHTV DI+C  CG  +
Sbjct: 56  LALC---DDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYV 115

Query: 86  GWKY 89
           GWKY
Sbjct: 116 GWKY 116

[Close]
BLAST of Lag0024950 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          D+I  SF       + F   VNVT G KE R+M++G HTV DIFC  CG ++GWKY
Sbjct: 28 DIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKY 83

[Close]
BLAST of Lag0024950 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-09
Identity = 28/56 (50.00%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 34 DLIDVSFKFADSN-FAFSANVNVTSGPKEERLMLSGMHTVEDIFCCCCGQILGWKY 89
          D+I  SF       + F   VNVT G KE R+M++G HTV DIFC  CG ++GWKY
Sbjct: 28 DIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKY 83

The following BLAST results are available for this feature:
BLAST of Lag0024950 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022927222.13.0e-1388.10protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippe... [more]
XP_038893524.13.0e-1388.10protein yippee-like At5g53940 [Benincasa hispida][more]
KAG6583979.13.0e-1388.10Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022955197.13.9e-1367.86protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 pr... [more]
XP_022140248.15.2e-1388.10protein yippee-like At5g53940 [Momordica charantia][more]
BLAST of Lag0024950 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FN329.1e-1360.71Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ... [more]
P592342.5e-1066.67Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1[more]
Q8S5M81.0e-0848.89Putative yippee-like protein Os10g0369500 OS=Oryza sativa subsp. japonica OX=399... [more]
Q6NWI42.3e-0844.71Protein yippee-like 3 OS=Danio rerio OX=7955 GN=ypel3 PE=3 SV=1[more]
Q9C7773.0e-0846.88Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ... [more]
BLAST of Lag0024950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KNK61.5e-1388.10Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1[more]
A0A6J1EGK21.5e-1388.10Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1[more]
A0A6J1K1C31.9e-1367.86Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1[more]
A0A6J1GSW91.9e-1367.86Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1[more]
A0A6J1CHK22.5e-1388.10Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1[more]
BLAST of Lag0024950 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G53940.16.5e-1460.71Yippee family putative zinc-binding protein [more]
AT3G11230.12.2e-0946.88Yippee family putative zinc-binding protein [more]
AT3G11230.22.2e-0946.88Yippee family putative zinc-binding protein [more]
AT3G08990.13.7e-0950.00Yippee family putative zinc-binding protein [more]
AT3G08990.23.7e-0950.00Yippee family putative zinc-binding protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 92..161
e-value: 3.9E-9
score: 37.1
IPR039058Yippee familyPANTHERPTHR13848PROTEIN YIPPEE-LIKE CG15309-RELATEDcoord: 32..91
NoneNo IPR availablePANTHERPTHR13848:SF56PROTEIN YIPPEE-LIKEcoord: 32..91
IPR034751Yippee domainPROSITEPS51792YIPPEEcoord: 17..122
score: 19.263538

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024950.1Lag0024950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0000151 ubiquitin ligase complex
molecular_function GO:0046872 metal ion binding