Lag0024508 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0024508
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr10: 3630985 .. 3631518 (+)
RNA-Seq ExpressionLag0024508
SyntenyLag0024508
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGCACAGCCTCATGTGTCAATGTTGGAGGAGAAATGGGGGAATATTGACATCAGGCCAATGAAAGGCGACAAAAAAGATAAGAATGTTGACATTAGGGAAGTAGACAAGATGTGGGTATGAGAAATTTGGGAAAGTTTGTTTGAAAAAATCTGTCCTTTTCTTTAAAAAAAATTGTTAATTTGCAAGGTAGAAGAGGGGAAATCAACTGACACTGCAGAGAATAAAGAATAATCCAAGATTATCAGGAATTTGATAACGGGGTTTGTTGTTGAACCAAAAAAGGGGGTTTGGATGAAGAAGAGGCCAACTTGAGAGCTCAAAACGAATTCAGAATGAGGGCTTTAGAATCAGAAACATTAATGTCATTAATGCAAGAAACTGTGGGTTGTACTATATGAATGTCAGAATGTTTGGCCAATGAAGAAGGAGGTCAAGGTCACAAAGGAAAGGGGGAAAAACCATCTTGGAGTCTCGAATTTACTTCAAAATGTGGTGGAGTATCAGAAAATTAATGGCATTGATGATTGA

mRNA sequence

ATGGAAGCACAGCCTCATGTGTCAATGTTGGAGGAGAAATGGGGGAATATTGACATCAGGCCAATGAAAGGCGACAAAAAAGATAAGAATGTTGACATTAGGGAAGTAGACAAGATGTGGAATGTTTGGCCAATGAAGAAGGAGGTCAAGGTCACAAAGGAAAGGGGGAAAAACCATCTTGGAGTCTCGAATTTACTTCAAAATGTGGTGGAGTATCAGAAAATTAATGGCATTGATGATTGA

Coding sequence (CDS)

ATGGAAGCACAGCCTCATGTGTCAATGTTGGAGGAGAAATGGGGGAATATTGACATCAGGCCAATGAAAGGCGACAAAAAAGATAAGAATGTTGACATTAGGGAAGTAGACAAGATGTGGAATGTTTGGCCAATGAAGAAGGAGGTCAAGGTCACAAAGGAAAGGGGGAAAAACCATCTTGGAGTCTCGAATTTACTTCAAAATGTGGTGGAGTATCAGAAAATTAATGGCATTGATGATTGA

Protein sequence

MEAQPHVSMLEEKWGNIDIRPMKGDKKDKNVDIREVDKMWNVWPMKKEVKVTKERGKNHLGVSNLLQNVVEYQKINGIDD
Homology
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BLAST of Lag0024508 vs. NCBI nr
Match: KAG6584212.1 (hypothetical protein SDJN03_20144, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.8 bits (177), Expect = 1.5e-09
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0 

Query: 1  MEAQPHVSMLEEKWGNIDIRPMKGDKKDKNVDIREVDKMW 41
          MEAQPHV+ML EKWGNIDIRP  GDK++KN DIRE DKMW
Sbjct: 1  MEAQPHVAMLGEKWGNIDIRPKDGDKREKNFDIREEDKMW 40

The following BLAST results are available for this feature:
BLAST of Lag0024508 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584212.11.5e-0980.00hypothetical protein SDJN03_20144, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Lag0024508 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0024508.1Lag0024508.1mRNA