Lag0023382 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023382
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like
Location	chr7: 47807251 .. 47807907 (+)
RNA-Seq Expression	Lag0023382
Synteny	Lag0023382

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGTCACTGACACCGGCGGCGCCTCCTCGGAGGCCGCGGCGGAGGGTTCGTCGGGTGGTGGGTCGGGTCCGTCGCCGGCCGCCGCCGCTCCGCCGAGCCGGTACGAGTCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCGTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCCTATTTCGGCCATCCCAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAGCAGGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGCCTCAGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTTGCCGCACGCGCCGTCAGGATTTATCTCCGTGAGGTCCGAGAAGCTCAGGCCAAAGCCAGAGGGATTCCCTACGAGAAGAAGAAGCGGAAAAGACCTTCCACCGCCGCCGCCAATGTGTCGGTGCCTCCACCCACTGAAGTTTCCTTGGGGAGTACTACCTCGAACACCGCCGCTGGAGACGATCACCCGGAAACCACCGCTGGCGGTGGTGATCAAAGTGGTGGAGCTCCGCCGTCGACCACCACCGTATAG

mRNA sequence

ATGGATTCCGTCACTGACACCGGCGGCGCCTCCTCGGAGGCCGCGGCGGAGGGTTCGTCGGGTGGTGGGTCGGGTCCGTCGCCGGCCGCCGCCGCTCCGCCGAGCCGGTACGAGTCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCGTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCCTATTTCGGCCATCCCAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAGCAGGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGCCTCAGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTTGCCGCACGCGCCGTCAGGATTTATCTCCGTGAGGTCCGAGAAGCTCAGGCCAAAGCCAGAGGGATTCCCTACGAGAAGAAGAAGCGGAAAAGACCTTCCACCGCCGCCGCCAATGTGTCGGTGCCTCCACCCACTGAAGTTTCCTTGGGGAGTACTACCTCGAACACCGCCGCTGGAGACGATCACCCGGAAACCACCGCTGGCGGTGGTGATCAAAGTGGTGGAGCTCCGCCGTCGACCACCACCGTATAG

Coding sequence (CDS)

ATGGATTCCGTCACTGACACCGGCGGCGCCTCCTCGGAGGCCGCGGCGGAGGGTTCGTCGGGTGGTGGGTCGGGTCCGTCGCCGGCCGCCGCCGCTCCGCCGAGCCGGTACGAGTCTCAGAAGAGAAGGGATTGGAACACGTTTTTGCAGTACTTGAAGAACCACAAGCCGCCACTGTCGTTAGCGCGTTGCAGTGGCGCTCACGTGATCGAATTCTTGAAGTACTTGGACCAGTTCGGGAAGACTAAGGTCCATGGATCGGGCTGCCCCTATTTCGGCCATCCCAACCCGCCTGCCCCCTGCCCCTGCCCGCTCAAGCAGGCCTGGGGCAGCCTCGACGCCTTGATCGGCCGCCTCAGAGCCGCCTACGAGGAGAACGGCGGCCGCCCCGAATCCAACCCATTTGCCGCACGCGCCGTCAGGATTTATCTCCGTGAGGTCCGAGAAGCTCAGGCCAAAGCCAGAGGGATTCCCTACGAGAAGAAGAAGCGGAAAAGACCTTCCACCGCCGCCGCCAATGTGTCGGTGCCTCCACCCACTGAAGTTTCCTTGGGGAGTACTACCTCGAACACCGCCGCTGGAGACGATCACCCGGAAACCACCGCTGGCGGTGGTGATCAAAGTGGTGGAGCTCCGCCGTCGACCACCACCGTATAG

Protein sequence

MDSVTDTGGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPPPTEVSLGSTTSNTAAGDDHPETTAGGGDQSGGAPPSTTTV

Homology

[Close]

BLAST of Lag0023382 vs. NCBI nr
Match: KAG6607334.1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037010.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.8 bits (904), Expect = 2.1e-93
Identity = 191/220 (86.82%), Postives = 198/220 (90.00%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVT++ GG SSE   EGSS GGS P  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AAANVSVP
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AAANVSVP 180

Query: 181 PPTEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           PPT+VSL GS++S TA  D  PETTA  GDQ+G APPSTT
Sbjct: 181 PPTDVSLAGSSSSATAGADIQPETTA-AGDQTGDAPPSTT 216

[Close]

BLAST of Lag0023382 vs. NCBI nr
Match: XP_022949557.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_022949558.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata])

HSP 1 Score: 351.3 bits (900), Expect = 6.1e-93
Identity = 190/220 (86.36%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVT++ GG SSE   EGSS GGS P  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AAANVSVP
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AAANVSVP 180

Query: 181 PPTEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           PPT+VSL GS++S T   D  PETTA  GDQ+G APPSTT
Sbjct: 181 PPTDVSLAGSSSSATVGADIQPETTA-AGDQTGDAPPSTT 216

[Close]

BLAST of Lag0023382 vs. NCBI nr
Match: XP_022998564.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima])

HSP 1 Score: 351.3 bits (900), Expect = 6.1e-93
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60
           MDSVT++ GG SSE   EGSS GGS  +P AAAPPSRYESQKRRDWNTFLQYLKNHKPPL
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGS--APLAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60

Query: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120
           SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL
Sbjct: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120

Query: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPPP 180
           RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AA NVSVPPP
Sbjct: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AATNVSVPPP 180

Query: 181 TEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           T+VSL GS++S T  GD  PETTA  GDQ+G APPSTT
Sbjct: 181 TDVSLAGSSSSATVGGDIQPETTA-SGDQTGDAPPSTT 212

[Close]

BLAST of Lag0023382 vs. NCBI nr
Match: XP_023523174.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.0 bits (894), Expect = 3.0e-92
Identity = 189/220 (85.91%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGPSPA--AAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVT++ GG SSE   EGSS GG+ P  A  AAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGTAPLAAAGAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AAANVSVP
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AAANVSVP 180

Query: 181 PPTEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           PPT+VSL GS++S T   D  PETTA  GDQ+G APPSTT
Sbjct: 181 PPTDVSLAGSSSSATVGADIQPETTA-AGDQTGDAPPSTT 216

[Close]

BLAST of Lag0023382 vs. NCBI nr
Match: XP_038893975.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida])

HSP 1 Score: 329.7 bits (844), Expect = 1.9e-86
Identity = 178/221 (80.54%), Postives = 186/221 (84.16%), Query Frame = 0


Query: 1   MDSVTDT--GGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPP 60
           MDSV++   GGAS    AEGSSGGG G S   AAPPSRYESQKRRDWNTFLQYLKNHKPP
Sbjct: 1   MDSVSEPGGGGASEGGTAEGSSGGGGGGSAPTAAPPSRYESQKRRDWNTFLQYLKNHKPP 60

Query: 61  LSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120
           L LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGR
Sbjct: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPP 180
           LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP   AA+ S PP
Sbjct: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP---AASASAPP 180

Query: 181 P-TEVSLGSTTSNTAAGDDHPETTAGGG--DQSGGAPPSTT 217
           P  +V   ++TS  AAGD   ETT+GGG  D +G  PPSTT
Sbjct: 181 PDPQVVSETSTSTAAAGDHQAETTSGGGGDDPTGAPPPSTT 218

[Close]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-71
Identity = 132/178 (74.16%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 9   GASSEAAAEGSSGGGSGPSPAAAAPP-SRYESQKRRDWNTFLQYLKNHKPPLSLARCSGA 68
           G+SS  A   + GGG GPSP++++P  SRYESQKRRDWNTF QYL+NH+PPLSL+RCSGA
Sbjct: 52  GSSSSGAGTSAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGA 111

Query: 69  HVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENG 128
           HV+EFLKY+DQFGKTKVH   CP++GHPNPPAPCPCPL+QAWGSLDALIGRLRAAYEENG
Sbjct: 112 HVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENG 171

Query: 129 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANV------SVPPP 180
           G PE NPF ARAVR+YLREVRE QA+ARGI YEKKKRK+PS+A A        S PPP
Sbjct: 172 GTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPP 229

[Close]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot
Match: Q6K5X1 (Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.0e-71
Identity = 132/178 (74.16%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 9   GASSEAAAEGSSGGGSGPSPAAAAPP-SRYESQKRRDWNTFLQYLKNHKPPLSLARCSGA 68
           G+SS  A   + GGG GPSP++++P  SRYESQKRRDWNTF QYL+NH+PPLSL+RCSGA
Sbjct: 52  GSSSSGAGTSAGGGGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSLSRCSGA 111

Query: 69  HVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENG 128
           HV+EFLKY+DQFGKTKVH   CP++GHPNPPAPCPCPL+QAWGSLDALIGRLRAAYEENG
Sbjct: 112 HVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENG 171

Query: 129 GRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANV------SVPPP 180
           G PE NPF ARAVR+YLREVRE QA+ARGI YEKKKRK+PS+A A        S PPP
Sbjct: 172 GTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPSSAGAGAGPSSEGSPPPP 229

[Close]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.5e-70
Identity = 133/163 (81.60%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 13  EAAAEGSS----GGGSGPSPAAAAP--PSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 72
           E+A  G S    G   GPS  ++ P  PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCSG
Sbjct: 2   ESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSG 61

Query: 73  AHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 132
           AHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 62  AHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEEN 121

Query: 133 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPST 170
           GGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKRP T
Sbjct: 122 GGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRPPT 164

[Close]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot
Match: A2Y3I2 (Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-69
Identity = 140/194 (72.16%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 30  AAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHGSGC 89
           AAA  SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGAHVIEFLKYLDQFGKTKVH  GC
Sbjct: 61  AAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGC 120

Query: 90  PYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVRE 149
            YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYLREVRE
Sbjct: 121 AYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVRE 180

Query: 150 AQAKARGIPYEKKKRKRPSTAAA--NVSVPPPTEVSLGSTTSNTAAG----DDHPETTAG 209
           AQAKARGIPYEKK+++  + AAA   V V PP  V+     + T+ G    DD  E T  
Sbjct: 181 AQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAPDDATGTSGGAGEDDDDDEATHS 240

Query: 210 GGDQSGGAPPSTTT 218
           G  Q      S TT
Sbjct: 241 GEQQDTTPAASPTT 254

[Close]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot
Match: Q5W659 (Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.2e-69
Identity = 140/194 (72.16%), Postives = 151/194 (77.84%), Query Frame = 0


Query: 30  AAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKVHGSGC 89
           AAA  SRYESQKRRDWNTFLQYL+NHKPPL+L RCSGAHVIEFLKYLDQFGKTKVH  GC
Sbjct: 61  AAAGLSRYESQKRRDWNTFLQYLRNHKPPLTLPRCSGAHVIEFLKYLDQFGKTKVHADGC 120

Query: 90  PYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVRE 149
            YFG PNPPAPC CPL+QAWGSLDALIGRLRAAYEE+GGRPESNPFAARAVRIYLREVRE
Sbjct: 121 AYFGEPNPPAPCACPLRQAWGSLDALIGRLRAAYEESGGRPESNPFAARAVRIYLREVRE 180

Query: 150 AQAKARGIPYEKKKRKRPSTAAA--NVSVPPPTEVSLGSTTSNTAAG----DDHPETTAG 209
           AQAKARGIPYEKK+++  + AAA   V V PP  V+     + T+ G    DD  E T  
Sbjct: 181 AQAKARGIPYEKKRKRGAAAAAAAPPVVVAPPPVVTAPDDATGTSGGAGEDDDDDEATHS 240

Query: 210 GGDQSGGAPPSTTT 218
           G  Q      S TT
Sbjct: 241 GEQQDTTPAASPTT 254

[Close]

BLAST of Lag0023382 vs. ExPASy TrEMBL
Match: A0A6J1GCE7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111452872 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.9e-93
Identity = 190/220 (86.36%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGP--SPAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVT++ GG SSE   EGSS GGS P  + AAAAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AAANVSVP
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AAANVSVP 180

Query: 181 PPTEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           PPT+VSL GS++S T   D  PETTA  GDQ+G APPSTT
Sbjct: 181 PPTDVSLAGSSSSATVGADIQPETTA-AGDQTGDAPPSTT 216

[Close]

BLAST of Lag0023382 vs. ExPASy TrEMBL
Match: A0A6J1KEN4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493161 PE=3 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.9e-93
Identity = 189/218 (86.70%), Postives = 196/218 (89.91%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60
           MDSVT++ GG SSE   EGSS GGS  +P AAAPPSRYESQKRRDWNTFLQYLKNHKPPL
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGS--APLAAAPPSRYESQKRRDWNTFLQYLKNHKPPL 60

Query: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120
           SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL
Sbjct: 61  SLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRL 120

Query: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPPP 180
           RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR   AA NVSVPPP
Sbjct: 121 RAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR---AATNVSVPPP 180

Query: 181 TEVSL-GSTTSNTAAGDDHPETTAGGGDQSGGAPPSTT 217
           T+VSL GS++S T  GD  PETTA  GDQ+G APPSTT
Sbjct: 181 TDVSLAGSSSSATVGGDIQPETTA-SGDQTGDAPPSTT 212

[Close]

BLAST of Lag0023382 vs. ExPASy TrEMBL
Match: A0A5A7UVV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00670 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 174/221 (78.73%), Postives = 185/221 (83.71%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEG-SSGGGSGPSPAA-AAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+++ GG +SE+  EG SS  G+G + AA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+  A      
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTA------ 180

Query: 181 PPTEVSLGSTTSNTAAGDDHPETTA-GGGDQSGGAPPSTTT 218
           PP E S  STT+ T  GD+ PETTA GGGD    APP +TT
Sbjct: 181 PPPETST-STTATTTTGDNQPETTAGGGGDDPAVAPPPSTT 214

[Close]

BLAST of Lag0023382 vs. ExPASy TrEMBL
Match: A0A1S3C5Y5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC103497051 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.0e-82
Identity = 174/221 (78.73%), Postives = 185/221 (83.71%), Query Frame = 0


Query: 1   MDSVTDT-GGASSEAAAEG-SSGGGSGPSPAA-AAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+++ GG +SE+  EG SS  G+G + AA  APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVP 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP+  A      
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTA------ 180

Query: 181 PPTEVSLGSTTSNTAAGDDHPETTA-GGGDQSGGAPPSTTT 218
           PP E S  STT+ T  GD+ PETTA GGGD    APP +TT
Sbjct: 181 PPPETST-STTATTTTGDNQPETTAGGGGDDPAVAPPPSTT 214

[Close]

BLAST of Lag0023382 vs. ExPASy TrEMBL
Match: A0A6J1HK49 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464848 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.1e-79
Identity = 166/219 (75.80%), Postives = 179/219 (81.74%), Query Frame = 0


Query: 1   MDSVTDTGGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLS 60
           MD V+  GG  SE ++ G+S   + P+P   AP SRYESQKRRDWNTFLQYLKNHKPPLS
Sbjct: 10  MDPVSKPGGGPSEGSSAGASAAATTPAP---APASRYESQKRRDWNTFLQYLKNHKPPLS 69

Query: 61  LARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 120
           LARCSGAHVIEFLKYLDQFGKTKVH SGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR
Sbjct: 70  LARCSGAHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLR 129

Query: 121 AAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPPPT 180
           AAYEENGGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKR   A+A+ S P PT
Sbjct: 130 AAYEENGGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKR-HAASASASAPAPT 189

Query: 181 E--VSLGSTTSNTAAGDDH-PETTAGGGDQSGGAPPSTT 217
              +S+   T    AG+DH PET+    D SG  PPSTT
Sbjct: 190 AAILSVPPETHVVLAGEDHQPETS----DPSGAPPPSTT 220

[Close]

BLAST of Lag0023382 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 265.0 bits (676), Expect = 5.3e-71
Identity = 133/163 (81.60%), Postives = 142/163 (87.12%), Query Frame = 0


Query: 13  EAAAEGSS----GGGSGPSPAAAAP--PSRYESQKRRDWNTFLQYLKNHKPPLSLARCSG 72
           E+A  G S    G   GPS  ++ P  PSRYESQKRRDWNTFLQYLKNHKPPL+L+RCSG
Sbjct: 2   ESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSG 61

Query: 73  AHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 132
           AHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 62  AHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEEN 121

Query: 133 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPST 170
           GGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKRP T
Sbjct: 122 GGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRPPT 164

[Close]

BLAST of Lag0023382 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 245.7 bits (626), Expect = 3.3e-65
Identity = 121/169 (71.60%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 11  SSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVI 70
           ++ +++  SS GGSG +       SRYE+QKRRDWNTF QYL+NH+PPLSL+RCSGAHV+
Sbjct: 28  TTTSSSSSSSSGGSGTNQL-----SRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVL 87

Query: 71  EFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRP 130
           EFL+YLDQFGKTKVH   CP+FGHPNPPAPC CPL+QAWGSLDALIGRLRAA+EENGG P
Sbjct: 88  EFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSP 147

Query: 131 ESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAANVSVPPP 180
           E+NPF ARAVR+YLREVR++QAKARGI YEKKKRKRP         PPP
Sbjct: 148 ETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRP---------PPP 182

[Close]

BLAST of Lag0023382 vs. TAIR 10
Match: AT5G58500.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 244.6 bits (623), Expect = 7.4e-65
Identity = 122/166 (73.49%), Postives = 137/166 (82.53%), Query Frame = 0


Query: 8   GGASSEAAAEGSSGGGSGPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCSGA 67
           G  +++AAA  SS             PSRYESQKRRDWNTFLQYL+NHKPPL+L+RCSGA
Sbjct: 3   GETAAKAAASSSSS------------PSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGA 62

Query: 68  HVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE-N 127
           HV+EFLKYLDQFGKTKVH + CP+FG PNPP+ C CPLKQAWGSLDALIGRLRAA+EE  
Sbjct: 63  HVLEFLKYLDQFGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIG 122

Query: 128 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPSTAAA 173
           GG PESNPFAA+AVRIYL+EVR+ QAKARGIPY+KKKRKRP T  A
Sbjct: 123 GGLPESNPFAAKAVRIYLKEVRQTQAKARGIPYDKKKRKRPHTDTA 156

[Close]

BLAST of Lag0023382 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 238.8 bits (608), Expect = 4.1e-63
Identity = 119/189 (62.96%), Postives = 154/189 (81.48%), Query Frame = 0


Query: 10  ASSEAAAEGSSGGGS----GPSPAAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSLARCS 69
           +++ ++  G++GG +      S + +A  SRYE+QKRRDWNTF QYL+NH+PPLSL+RCS
Sbjct: 24  SNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCS 83

Query: 70  GAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE 129
           GAHV+EFL+YLDQFGKTKVH + C ++GHPNPPAPCPCPL+QAWGSLDALIGRLRAA+EE
Sbjct: 84  GAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEE 143

Query: 130 NGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP---STAAANVSVPPPTEV 189
           NGG+PE+NPF ARAVR+YLREVR+ Q+KARG+ YEKKKRKRP   S+ +++ +V    + 
Sbjct: 144 NGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRPLPSSSTSSSSAVASHQQF 203

Query: 190 SLGSTTSNT 192
            +   TS+T
Sbjct: 204 QMLPGTSST 212

[Close]

BLAST of Lag0023382 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 231.5 bits (589), Expect = 6.5e-61
Identity = 109/149 (73.15%), Postives = 125/149 (83.89%), Query Frame = 0


Query: 27  SPAAAAPP--SRYESQKRRDWNTFLQYLKNHKPPLSLARCSGAHVIEFLKYLDQFGKTKV 86
           S     PP  SRYE+QKRRDWNTF QYL+NH+PPLSL  CSGAHV+EFL+YLDQFGKTKV
Sbjct: 14  SSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKV 73

Query: 87  HGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 146
           H   C +FG PNPPAPCPCPL+QAWGSLDALIGRLRAAYEENGG PE+NPF +RAVR++L
Sbjct: 74  HHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFL 133

Query: 147 REVREAQAKARGIPYEKKK----RKRPST 170
           REVR+ QAKARG+ YEKK+    R++P T
Sbjct: 134 REVRDFQAKARGVSYEKKRKRVNRQKPQT 162

The following BLAST results are available for this feature:

BLAST of Lag0023382 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6607334.1	2.1e-93	86.82	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6, partial [Cucurbita argyrosperma subs...	[more]
XP_022949557.1	6.1e-93	86.36	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_0229495...	[more]
XP_022998564.1	6.1e-93	86.70	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita maxima]	[more]
XP_023523174.1	3.0e-92	85.91	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_038893975.1	1.9e-86	80.54	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida]	[more]

BLAST of Lag0023382 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XAV5	4.0e-71	74.16	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]
Q6K5X1	4.0e-71	74.16	Protein G1-like6 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L6 PE=1 SV=1	[more]
Q9LMK2	7.5e-70	81.60	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2Y3I2	2.2e-69	72.16	Protein G1-like9 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19565 PE=3 SV=1	[more]
Q5W659	2.2e-69	72.16	Protein G1-like9 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L9 PE=1 SV=1	[more]

BLAST of Lag0023382 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GCE7	2.9e-93	86.36	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KEN4	2.9e-93	86.70	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7UVV8	1.0e-82	78.73	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5Y5	1.0e-82	78.73	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HK49	1.1e-79	75.80	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Lag0023382 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07090.1	5.3e-71	81.60	Protein of unknown function (DUF640)	[more]
AT3G23290.2	3.3e-65	71.60	Protein of unknown function (DUF640)	[more]
AT5G58500.1	7.4e-65	73.49	Protein of unknown function (DUF640)	[more]
AT2G31160.1	4.1e-63	62.96	Protein of unknown function (DUF640)	[more]
AT5G28490.1	6.5e-61	73.15	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 32..149 e-value: 2.4E-65 score: 218.4
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 36..163 score: 84.350983
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 173..196
None	No IPR available	PANTHER	PTHR31165:SF59	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 9..195
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 9..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023382.1	Lag0023382.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus