Lag0023343 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023343
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	nudC domain-containing protein 2
Location	chr7: 47409488 .. 47412106 (+)
RNA-Seq Expression	Lag0023343
Synteny	Lag0023343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGAAATTGGCTCCAGACAAGCGCCATAGCTTCCTACACAACGGTATTCTCTTTATCTTCATCAATTTGATCTTCAGAATTTTCAATTTGAACGAATGAATTCGCTGTTGTACGAGTGGTTTGACATTTGTGCTCGATTGCACGTGTTTTTTCAGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCCAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATGTCGGTATCATTGCATTTTCATCTCTCTCTCTATCTTTCTTGCTCGCTCGATTTAATTTTGAAATTTTGATATACTGCTTCGTTAATGATCGTACCGATTGCTTTCAATTATTGATTTGCAGCACGAGCTTACTAGCCTTGTGAAGATGGATTCGTCTTTCTGGACGCTAGGTAATTGGAAATTCTTGCTTTAATGACTAAAAGGGATTTCTAGGTGGTTGAGTGTTGTACTTTTAGGCCAGATAAATTTGATGGGACTGAACTTGAGGAAAATATAATGTTAAATGAGCTAGATTATATTGCCTTCTATTTTTATCTTCCTCTTATGATTGCTCCACTTTTGGCTATGTTGTGATGTAATTGTTTTGTTTGGGCAGAGGATGACATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGTCAGGGTCAACTTGATCCTTACTCCACTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGGTCAGGGTTCTTTTTCTCGAGCATTTCTTACCATTTTTAATCAGAGATCAATTGTTTCAAGTTGTCAAAATAGATTTTTCATTCTACGGGGCTAGGATCATGGCGGTTTCCATTGTTTGGATTGTTGGCGCTCATTATTTGGAGATTTTATTTTAATGAGTAAACAGTTAGTGCGATGTTATGATGACTGCTTGATTTTGATATCTGAAACGAGGCTAATGTGCCTTGTCATAAGTATGAGAGAGAGAGAGGCTAACGTGTCTGGGAAATCATGACATTGATTCACGTTGTTACAGTGCCCTATGAGAAAAACAGGAAAAGCTTCCTATAAATGTGAATAACTTGACAGTTTTGCAATCTAGACTTGGTGGACTGAGTTGCACCAGTGGTTATAAATGTAAATTGGACAGGCAGTTAATTAATCAATTATTCCAGCAGCCACAAGTAGGAAATAGCATTATTCTTCCTATAGTCTAGCCGAGGGTGGGGGTGAAACTATGGATTGACCTAGTGGTCTAGAAGTGTCGTGTAAATAATAAAGGGCCTAGAGGGAATAAGTTCAAGCTATGATTGCAAACTACTTAGGATTTAATATCCTACAAGTTTTCTTGGCAACAACATGTAGTTGGGTTAAACAGTTGTCTTATAAGAATGAGGTGCTGCAAACTAGCCTAGACACTCACGGATATAAAAGAAAAAAATCTGCCATTCTCATGAGATGCATTGCATCCTCCTCTCCTCCATAAAAAACTTCTTCTCTAGACTCAAACATGAGTTCTTCAACTTCTCTAAACTGATGTAGGCCGTAGGGTAGATGAACCCTTTCTTCCAAATTTACATCTGACAAGAGAGGGCGGGTCTATCTCATACATAACTAAGGATTACGCTAGAGAGCACACTCTGCAAGTCTATTTTGTTTGATTTCATCTCTTTGTAGATATCTTGTAAATGGTCAATTAGGTGCATCCAACAAGAGGTGAAAAAACTACCAACCCAGTAGGCTAACTCTTTTTCCTTCAAGGCACTCCCAAGATGACTTGAACATGTGATGAGCTCTTGTACCAACTGATGTAGCACAGATGAACCAATTTTTCCAAAGCGGCAGTTGATAGGACTTAGGAGAGAGCCCAATTATTCCTATACTTCATCCATGGCCAAGCTCAAGAGTCCCCCTGCAAGGCTACTCCATTTGGAGCCTGTCCTTGTAGGTAGCCTATAGAACCCAATCGAGGTAAAGGAAAAACTCTCGTAAGTCCATCCTCATGTTCAAGGGATGACCCTGCATCACTTGTTTTTGTTGCACTTCAGATTCCATGCTTTTGTATATTCAAGCTTTTGAATTTTTGTTGGATGAGATAGGAGTAATTGGGTTGCATTCAACCATTGCATACAAAGTTTCTTGTCCGATTCTGGTTGAGTCACTACAAATGCTATCCACTCTGAATGTCACATAAACACACACAGTGAGAGAGAGTTCATTAACTATGGATAGGGGAGTTGTAGGATTCTTGTTACTAAACTTTTATTGGGTGCTGGTTTTATATATCCCCAAGTGGCTGTGTTGGACTGCCTCTGTATGGCCTACTTGATATCTTGGAAATACATGAACTTCTTTCCTTTTCTACATAATTTCACTAGTCTTAAGTCATGTGTCAGTCATGTAATGAAATCTTGAAATTTAATCTGCACTATTTCTCTGCAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGCTCAGATTGA

mRNA sequence

ATGGCTGAGAAATTGGCTCCAGACAAGCGCCATAGCTTCCTACACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCCAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTAGCCTTGTGAAGATGGATTCGTCTTTCTGGACGCTAGAGGATGACATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGTCAGGGTCAACTTGATCCTTACTCCACTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGCTCAGATTGA

Coding sequence (CDS)

ATGGCTGAGAAATTGGCTCCAGACAAGCGCCATAGCTTCCTACACAACGGTCAGAAAGTGTTTGAATGGGATCAGACTCTGGAGGAGGTTAACATTTATATTAATTTGCCTCCCAATGTTCATTCCAAGCAATTCTACTGCAAGATTCAGTCTAGGCATGTCGAGGTTGGCATCAAGGGGAATCCTCCTTATCTCAATCACGAGCTTACTAGCCTTGTGAAGATGGATTCGTCTTTCTGGACGCTAGAGGATGACATAATGCACATTACACTGCAGAAGAGGGACAAGGGTCAGACATGGGCTTCTCCCATACAGGGTCAGGGTCAACTTGATCCTTACTCCACTGATCTTGAGCAGAAGCGTCTTATGCTCCAGAGGTTTCAAGAGGAGAACCCTGGATTTGACTTTTCACAAGCTCAGTTTTCGGGCAACTGTCCTGATCCAAGGACCTTCATGGGTGGAATTCGCTCAGATTGA

Protein sequence

MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD

Homology

[Close]

BLAST of Lag0023343 vs. NCBI nr
Match: XP_038894388.1 (nudC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60
           MAEKLAP+KRHSFLHNGQKVFEWDQTLE+VNIYINLPPNVHSKQFYCKIQSRHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEDVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60

Query: 61  NPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPP+LNHELT  VK DSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPFLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]

BLAST of Lag0023343 vs. NCBI nr
Match: XP_008457374.1 (PREDICTED: nudC domain-containing protein 2 [Cucumis melo] >KAA0031818.1 nudC domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 321.6 bits (823), Expect = 3.7e-84
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0


Query: 1   MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60
           MAEKLAP+KRHSFLHNGQKVFEWDQTLEEVNIYINLPPNV+SKQFYCKIQSRHVEVGIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVNSKQFYCKIQSRHVEVGIKG 60

Query: 61  NPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNHELT  VK DSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYS+DLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSSDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 157
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIR 156

[Close]

BLAST of Lag0023343 vs. NCBI nr
Match: KAG6607306.1 (NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 320.9 bits (821), Expect = 6.3e-84
Identity = 149/158 (94.30%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60
           MAEKLAP+KRHSFLHNGQ+VFEWDQTLEEVN+YINLPPNVHSKQFYCKIQSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNHELT  VK DSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLNHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD 159
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI SD
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIHSD 158

[Close]

BLAST of Lag0023343 vs. NCBI nr
Match: XP_023523271.1 (nudC domain-containing protein 2-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.1 bits (819), Expect = 1.1e-83
Identity = 149/158 (94.30%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60
           MAEKLAP+KRHSFLHNGQ+VFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVE+GIKG
Sbjct: 1   MAEKLAPEKRHSFLHNGQEVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVELGIKG 60

Query: 61  NPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYL+HELT  VK DSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLDHELTCPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD 159
           RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGI SD
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIHSD 158

[Close]

BLAST of Lag0023343 vs. NCBI nr
Match: XP_022150966.1 (nudC domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 147/158 (93.04%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MAEKLAPDKRHSFLHNGQKVFEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKG 60
           M EKLAP+KRHSFLHNGQ+VFEWDQTLEEVN+YINLPPNVHSKQFYCK+QSRHVEVGIKG
Sbjct: 1   MEEKLAPEKRHSFLHNGQEVFEWDQTLEEVNMYINLPPNVHSKQFYCKVQSRHVEVGIKG 60

Query: 61  NPPYLNHELTSLVKMDSSFWTLEDDIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120
           NPPYLNH+LT  VK DSSFWTLED IMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK
Sbjct: 61  NPPYLNHDLTGPVKTDSSFWTLEDGIMHITLQKRDKGQTWASPIQGQGQLDPYSTDLEQK 120

Query: 121 RLMLQRFQEENPGFDFSQAQFSGNCPDPRTFMGGIRSD 159
           RLMLQRFQEENPGFDFSQAQF+GNCPDPRTFMGGIRSD
Sbjct: 121 RLMLQRFQEENPGFDFSQAQFTGNCPDPRTFMGGIRSD 158

[Close]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot
Match: Q8WVJ2 (NudC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NUDCD2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 22  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFWT 81
           +W QTLEEV I + +PP   ++   C +QSRHV + + G    L  +L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALSV-GGREILKGKLFDSTIADEGTWT 79

Query: 82  LEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KRD    W S ++ +   DP+  D  Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 AQFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

[Close]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot
Match: Q9CQ48 (NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 22  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFWT 81
           +W QTLEEV I + +PP   ++   C +QSRHV + + G    L  +L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV-GGREILKGKLFDSTIADEGTWT 79

Query: 82  LEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KRD    W S ++ +   DP+  D  Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 AQFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

[Close]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot
Match: Q5M823 (NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-20
Identity = 53/126 (42.06%), Postives = 72/126 (57.14%), Query Frame = 0


Query: 22  EWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFWT 81
           +W QTLEEV I + +PP   ++   C +QSRHV + + G    L  +L      D   WT
Sbjct: 20  QWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAV-GGREILKGKLFDSTIADEGTWT 79

Query: 82  LEDDIM---HITLQKRDKGQTWASPIQGQGQLDPYSTDLEQKRLMLQRFQEENPGFDFSQ 141
           LED  M    +T  KRD    W S ++ +   DP+  D  Q++L L+RFQ+ENPGFDFS 
Sbjct: 80  LEDRKMVRIVLTKTKRDAANCWTSLLESEYAADPWVQDQMQRKLTLERFQKENPGFDFSG 139

Query: 142 AQFSGN 145
           A+ SGN
Sbjct: 140 AEISGN 144

[Close]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot
Match: Q9STN7 (Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 45/158 (28.48%), Postives = 76/158 (48.10%), Query Frame = 0


Query: 21  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFW 80
           + W Q L+EV I I +P    S+   C+I+   ++VG+KG    ++ E  + VK D  FW
Sbjct: 136 YSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFW 195

Query: 81  TLEDD-IMHITLQKRDKGQTWASPIQGQ---------------GQLDPYS---------- 140
            +ED  ++ + L K+D+ + W   ++G+               G LDP +          
Sbjct: 196 NIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFD 255

Query: 141 ----------TDLEQKRLMLQRFQEENPGFDFSQAQFS 143
                     +D  +K+ ML++F  +NPG DFS A+F+
Sbjct: 256 QRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN 293

[Close]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot
Match: Q9LV09 (Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.8e-12
Identity = 41/158 (25.95%), Postives = 73/158 (46.20%), Query Frame = 0


Query: 21  FEWDQTLEEVNIYINLPPNVHSKQFYCKIQSRHVEVGIKGNPPYLNHELTSLVKMDSSFW 80
           + W Q L+EV + I +P    ++   C+I+   ++VG+KG  P ++ EL   VK D  +W
Sbjct: 147 YSWIQNLQEVTVNIPVPTGTKARTVVCEIKKNRLKVGLKGQDPIVDGELYRSVKPDDCYW 206

Query: 81  TLEDD-IMHITLQKRDKGQTWASPIQGQGQLDPYSTDLE--------------------- 140
            +ED  ++ I L K D+ + W   ++G+ ++D    + E                     
Sbjct: 207 NIEDQKVISILLTKSDQMEWWKCCVKGEPEIDTQKVEPETSKLGDLDPETRSTVEKMMFD 266

Query: 141 --------------QKRLMLQRFQEENPGFDFSQAQFS 143
                         QK+ +L++F  E+P  DFS A+F+
Sbjct: 267 QRQKQMGLPTSEELQKQEILKKFMSEHPEMDFSNAKFN 304

The following BLAST results are available for this feature:

BLAST of Lag0023343 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038894388.1	1.3e-84	96.15	nudC domain-containing protein 2 [Benincasa hispida]	[more]
XP_008457374.1	3.7e-84	96.15	PREDICTED: nudC domain-containing protein 2 [Cucumis melo] >KAA0031818.1 nudC do...	[more]
KAG6607306.1	6.3e-84	94.30	NudC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023523271.1	1.1e-83	94.30	nudC domain-containing protein 2-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022150966.1	1.4e-83	93.04	nudC domain-containing protein 2 [Momordica charantia]	[more]

BLAST of Lag0023343 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8WVJ2	1.0e-20	42.06	NudC domain-containing protein 2 OS=Homo sapiens OX=9606 GN=NUDCD2 PE=1 SV=1	[more]
Q9CQ48	1.0e-20	42.06	NudC domain-containing protein 2 OS=Mus musculus OX=10090 GN=Nudcd2 PE=1 SV=1	[more]
Q5M823	1.0e-20	42.06	NudC domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Nudcd2 PE=2 SV...	[more]
Q9STN7	2.1e-13	28.48	Protein BOBBER 2 OS=Arabidopsis thaliana OX=3702 GN=BOB2 PE=2 SV=1	[more]
Q9LV09	1.8e-12	25.95	Protein BOBBER 1 OS=Arabidopsis thaliana OX=3702 GN=BOB1 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007052	CS domain	PFAM	PF04969	CS	coord: 21..93 e-value: 2.4E-17 score: 63.7
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 16..104 score: 15.523032
None	No IPR available	GENE3D	1.20.5.740	Single helix bin	coord: 103..131 e-value: 6.2E-6 score: 27.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..158
None	No IPR available	PANTHER	PTHR12356:SF18	HSP20-LIKE CHAPERONES SUPERFAMILY PROTEIN	coord: 2..148
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 21..104 e-value: 7.96961E-35 score: 114.952
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 16..102 e-value: 8.8E-22 score: 79.5
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 8..115
IPR037898	NudC family	PANTHER	PTHR12356	NUCLEAR MOVEMENT PROTEIN NUDC	coord: 2..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023343.1	Lag0023343.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051082	unfolded protein binding