Lag0023138 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0023138
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr7: 44823279 .. 44823992 (+)
RNA-Seq Expression	Lag0023138
Synteny	Lag0023138

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCAATGACTCTAGTACAAGATTGGTCAAAGTTGTGTTTGACATCAGTGGAGGATGAAATCGCGGTAGCTGCTGACAGACCGGCGGTGGATAGAACTGGTTCCTCGCTTGGATGTTGTTTGATTGGCAAGCTCCAATCACATCGATTTCTGGCTACGGAAGTGATGAGGAGAACATTTTCTTCAGCTTGGAGAGTGGTTCATGGATTGCAAGTGGAGATACTTGGCAAGAATATCTTCATTTTCAGGTTCGAAAATGAAGGAGAACGGAATCGGGTTTTTAGGCAGGGGCCGTGGAGCTTTGATAAGTTCCTCCTGGTCTTAGAATTTCCTATCCGAGGGCTTAAGCCATCTGATTATCGCTTTTCGTCTGTCGCCTTCTGGATTCATTTCTATGATTTGCCCTTAGATTGGTACAATCAGGAGATGGCAGAGCGGCTCGGAAATGCGCTTGGTGAGTATGAAGACGTCGATAGTCGTAATGGGTTTCACCATCTGGGGGCGAGCATGCGAGTGAGAGTCAGGTTGGATATTTCTCGGCCTCTTCGAAGGGGGGTCAAAATTATTTTGGACGACTCCATAGGTGGTAGCTGGATTGCAGTTCAGTACGAGCGGTTACCTGAATTTTGCTTCTTTTGTGGAATTATTGGTCACATACTCAAAGATTGCGGAAGAGCGAGCGTAGGTGTTCAGGGACTCTGCCTGCTTTGA

mRNA sequence

ATGGATCCAATGACTCTAGTACAAGATTGGTCAAAGTTGTGTTTGACATCAGTGGAGGATGAAATCGCGGTAGCTGCTGACAGACCGGCGGTGGATAGAACTGGTTCCTCGCTTGGATGTTGTTTGATTGGCAAGCTCCAATCACATCGATTTCTGGCTACGGAAGTGATGAGGAGAACATTTTCTTCAGCTTGGAGAGTGGTTCATGGATTGCAAGTGGAGATACTTGGCAAGAATATCTTCATTTTCAGGTTCGAAAATGAAGGAGAACGGAATCGGGTTTTTAGGCAGGGGCCGTGGAGCTTTGATAAGTTCCTCCTGGTCTTAGAATTTCCTATCCGAGGGCTTAAGCCATCTGATTATCGCTTTTCGTCTGTCGCCTTCTGGATTCATTTCTATGATTTGCCCTTAGATTGGTACAATCAGGAGATGGCAGAGCGGCTCGGAAATGCGCTTGGTGAGTATGAAGACGTCGATAGTCGTAATGGGTTTCACCATCTGGGGGCGAGCATGCGAGTGAGAGTCAGGTTGGATATTTCTCGGCCTCTTCGAAGGGGGGTCAAAATTATTTTGGACGACTCCATAGGTGGTAGCTGGATTGCAGTTCAGTACGAGCGGTTACCTGAATTTTGCTTCTTTTGTGGAATTATTGGTCACATACTCAAAGATTGCGGAAGAGCGAGCGTAGGTGTTCAGGGACTCTGCCTGCTTTGA

Coding sequence (CDS)

ATGGATCCAATGACTCTAGTACAAGATTGGTCAAAGTTGTGTTTGACATCAGTGGAGGATGAAATCGCGGTAGCTGCTGACAGACCGGCGGTGGATAGAACTGGTTCCTCGCTTGGATGTTGTTTGATTGGCAAGCTCCAATCACATCGATTTCTGGCTACGGAAGTGATGAGGAGAACATTTTCTTCAGCTTGGAGAGTGGTTCATGGATTGCAAGTGGAGATACTTGGCAAGAATATCTTCATTTTCAGGTTCGAAAATGAAGGAGAACGGAATCGGGTTTTTAGGCAGGGGCCGTGGAGCTTTGATAAGTTCCTCCTGGTCTTAGAATTTCCTATCCGAGGGCTTAAGCCATCTGATTATCGCTTTTCGTCTGTCGCCTTCTGGATTCATTTCTATGATTTGCCCTTAGATTGGTACAATCAGGAGATGGCAGAGCGGCTCGGAAATGCGCTTGGTGAGTATGAAGACGTCGATAGTCGTAATGGGTTTCACCATCTGGGGGCGAGCATGCGAGTGAGAGTCAGGTTGGATATTTCTCGGCCTCTTCGAAGGGGGGTCAAAATTATTTTGGACGACTCCATAGGTGGTAGCTGGATTGCAGTTCAGTACGAGCGGTTACCTGAATTTTGCTTCTTTTGTGGAATTATTGGTCACATACTCAAAGATTGCGGAAGAGCGAGCGTAGGTGTTCAGGGACTCTGCCTGCTTTGA

Protein sequence

MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRASVGVQGLCLL

Homology

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BLAST of Lag0023138 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-61
Identity = 113/232 (48.71%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           MD   L+ DW K  LTS EDEIA+  D  AV      L   L+GKL + R ++ +V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSD 120
              AW+V H L VE +GKN+F+F F  E + NRV + GPW FDK L+VL+ P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 YRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDIS 180
             F+ VAFWIH +DLP+ W N+ MA RLGNA+G + DVD        GAS+R+RV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 RPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRASVGVQ 233
           +PLRRG+KI +D  +GG WI +QYERLP+FC+FCG+IGH   DC    +  Q
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQ 232

[Close]

BLAST of Lag0023138 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 1.0e-53
Identity = 103/230 (44.78%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           M    L+++W    LTS ED+IAV  D  A++ TG  L   LI KL S R ++  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPS 120
              AW++      V+I+G NIF+F F    +RNR+ R GPW+FD+ L++++ P+   KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDI 180
           D  F +V+ W+HF+DL L   N+ MA RLGNA+G +EDV+S       G+ +RVRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRASV 230
            +PL RG+K+ LD  +GG WI +QYERLP+F + CG + HILKDC    V
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCV 230

[Close]

BLAST of Lag0023138 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-48
Identity = 93/217 (42.86%), Postives = 142/217 (65.44%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           M    L+++W    LTS E+E A+  D  A   TGS L   L+GKL   R +   VM+ T
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPS 120
             +AW++  +  +V+ LG N+F+F F    +RN++++ GPW+FD+ L+++  P+  + PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDI 180
           +  F+ +  W+ F+DLPL    ++MA RLGNALG +E+ D  +     G+++RVRV LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGI 217
           S+PLRRG+K+ LD  IGG+WI +QYERLP+FC+ CG+
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL 217

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BLAST of Lag0023138 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-40
Identity = 87/223 (39.01%), Postives = 134/223 (60.09%), Query Frame = 0


Query: 5   TLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLG---CCLIGKLQSHRFLATEVMRRTF 64
           +LV     L LTS ED +     R   D T   +G    CL+GKL + R    E M+ T 
Sbjct: 4   SLVDLTRTLSLTSEEDAVV----RIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTL 63

Query: 65  SSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDY 124
            S W+   G+QV ++G N+F+F F +  ++ RV   GPW+FDK LL+L      ++PSD 
Sbjct: 64  LSVWQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDI 123

Query: 125 RFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISR 184
           + + V FW+H  +LPL   N+++ + +GNA+G++ D+D  +G    G +MR+RV +D+ +
Sbjct: 124 QLTGVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAIDVRK 183

Query: 185 PLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
           PLRRG+K+ L  S    W+  +YERLP +C+FCG +GH  ++C
Sbjct: 184 PLRRGMKLAL-SSADPIWVDFKYERLPIYCYFCGRLGHSDREC 221

[Close]

BLAST of Lag0023138 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 175.3 bits (443), Expect = 6.5e-40
Identity = 85/212 (40.09%), Postives = 128/212 (60.38%), Query Frame = 0


Query: 13  LCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVHGLQ 72
           L LTS ED +            G S   CL+GKL + R    E M+ T  S W+   G+Q
Sbjct: 12  LSLTSEEDAVVRIGGESTSLMMGKS-DMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQ 71

Query: 73  VEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFWIHF 132
           V ++G N+F+F F +  ++ RV   GPW+FDK LL+L      ++PSD + + V FW+H 
Sbjct: 72  VRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHV 131

Query: 133 YDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKIILD 192
            +LPL   N+++ E +GNA+G++ D+D  +G    G +MR+RV LD+ +PLRRG+K+ L 
Sbjct: 132 CNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLAL- 191

Query: 193 DSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
            S    W+  +YERLP +C+FCG +GH  ++C
Sbjct: 192 SSAEPIWVDFKYERLPIYCYFCGRLGHSEREC 221

[Close]

BLAST of Lag0023138 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.2e-61
Identity = 113/232 (48.71%), Postives = 149/232 (64.22%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           MD   L+ DW K  LTS EDEIA+  D  AV      L   L+GKL + R ++ +V+ R 
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 61  FSSAWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSD 120
              AW+V H L VE +GKN+F+F F  E + NRV + GPW FDK L+VL+ P      S+
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 121 YRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDIS 180
             F+ VAFWIH +DLP+ W N+ MA RLGNA+G + DVD        GAS+R+RV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 181 RPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRASVGVQ 233
           +PLRRG+KI +D  +GG WI +QYERLP+FC+FCG+IGH   DC    +  Q
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQ 232

[Close]

BLAST of Lag0023138 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 5.0e-54
Identity = 103/230 (44.78%), Postives = 146/230 (63.48%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           M    L+++W    LTS ED+IAV  D  A++ TG  L   LI KL S R ++  V++ T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 61  FSSAWRV-VHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPS 120
              AW++      V+I+G NIF+F F    +RNR+ R GPW+FD+ L++++ P+   KP 
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 121 DYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDI 180
           D  F +V+ W+HF+DL L   N+ MA RLGNA+G +EDV+S       G+ +RVRVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180

Query: 181 SRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRASV 230
            +PL RG+K+ LD  +GG WI +QYERLP+F + CG + HILKDC    V
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCV 230

[Close]

BLAST of Lag0023138 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-48
Identity = 93/217 (42.86%), Postives = 142/217 (65.44%), Query Frame = 0


Query: 1   MDPMTLVQDWSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRT 60
           M    L+++W    LTS E+E A+  D  A   TGS L   L+GKL   R +   VM+ T
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 61  FSSAWRVV-HGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPS 120
             +AW++  +  +V+ LG N+F+F F    +RN++++ GPW+FD+ L+++  P+  + PS
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 121 DYRFSSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDI 180
           +  F+ +  W+ F+DLPL    ++MA RLGNALG +E+ D  +     G+++RVRV LDI
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDI 180

Query: 181 SRPLRRGVKIILDDSIGGSWIAVQYERLPEFCFFCGI 217
           S+PLRRG+K+ LD  IGG+WI +QYERLP+FC+ CG+
Sbjct: 181 SKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL 217

[Close]

BLAST of Lag0023138 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 80/219 (36.53%), Postives = 127/219 (57.99%), Query Frame = 0


Query: 10  WSKLCLTSVEDEIAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSAWRVVH 69
           W     T+ E+E  V  DR     T  ++  C++ KL + + ++ E +R    S WRV +
Sbjct: 8   WEHFKSTNDENE-TVTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHN 67

Query: 70  GLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSVAFW 129
             + E LG NI++  F++  E++RV   GPW+F+K LLVL  P    +P D  F+  AFW
Sbjct: 68  STRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFW 127

Query: 130 IHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVKI 189
           I  +++P +  + EMA  LG  LG+ E+++        G  +RVRV++D+S+PLRRG+K+
Sbjct: 128 IQIHNIPFECISTEMANILGAKLGDVEEIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKL 187

Query: 190 ILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDCGRAS 229
              D     W  ++YE+LP+FC+ CG IGH  ++C + S
Sbjct: 188 KNSDG-KDIWCPLRYEKLPDFCYECGKIGHSGRECEQRS 224

[Close]

BLAST of Lag0023138 vs. ExPASy TrEMBL
Match: A0A2N9GWE9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.5e-37
Identity = 81/221 (36.65%), Postives = 128/221 (57.92%), Query Frame = 0


Query: 6   LVQDWSKLCLTSVEDE-IAVAADRPAVDRTGSSLGCCLIGKLQSHRFLATEVMRRTFSSA 65
           LV++W K  LT  E   + +AAD   V R   S   CL+GKL + ++   E ++ T    
Sbjct: 5   LVEEWRKFSLTEAEGPGVTIAADAMEVSRMVGS--HCLLGKLWTEKYFNREALKATMLRL 64

Query: 66  W-RVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRF 125
           W  V  G+    +G+N+F+F+F ++ ER RV    PW FD  LL+L+        S  +F
Sbjct: 65  WGGVARGITARNIGENLFVFQFRDDFERRRVMTGAPWLFDNSLLLLKEFDGSCPASQVQF 124

Query: 126 SSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPL 185
           S   FW+ FY +PL +  ++  E++G+  G+ E+VD        G  +RVR+ LDI++P+
Sbjct: 125 SWCCFWVQFYGVPLSYMTKQTGEQVGSVFGKVEEVDVSEDGVGWGTYLRVRICLDITKPI 184

Query: 186 RRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
            RG +++  +S+G  W++ +YERLP  CF CG+IGH+ +DC
Sbjct: 185 PRG-RVVTFNSLGQMWVSFKYERLPWLCFHCGLIGHLERDC 222

[Close]

BLAST of Lag0023138 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 7.2e-13
Identity = 45/158 (28.48%), Postives = 72/158 (45.57%), Query Frame = 0


Query: 67  VVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRFSSV 126
           +VHG    I+    F F F  E     V R+GPW+F+ ++++L+      +P    F  +
Sbjct: 162 LVHG---RIMEGRQFHFIFTLEESLETVLRRGPWAFNDWMILLQ----RWEPQIPLFPFI 221

Query: 127 AFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRG 186
            FW+    +P  + N+ + E +G ALG+  D D            RV +  DI+ PLR  
Sbjct: 222 PFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQ 281

Query: 187 VKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
                   +  + +  +YERL  FC  CG++ H    C
Sbjct: 282 RHFQFTAGV-NTLLRFRYERLRGFCEVCGMLTHDFGAC 311

[Close]

BLAST of Lag0023138 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 8.8e-11
Identity = 43/161 (26.71%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 64  AWRVVHGLQVEILGKNIFIFRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLKPSDYRF 123
           AW + + +   +L      F F++E +   V R+ PW ++ + +  +     L  + +  
Sbjct: 61  AWGLTNRVHGRVLNDTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQRWEVNL--TFHLL 120

Query: 124 SSVAFWIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPL 183
           +S+  W+    +PL +  +E A  + + LGE   +D  +      A +RVR+R  I+  L
Sbjct: 121 TSIELWVQMRGIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIRVRIRFGITDRL 180

Query: 184 RRGVKIILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
           R  ++II  DS   + I+ QYERL   C  C  + H    C
Sbjct: 181 RFFLRIIF-DSGETALISFQYERLRRICSSCFRMTHHRNSC 218

[Close]

BLAST of Lag0023138 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 57.8 bits (138), Expect = 1.4e-08
Identity = 41/156 (26.28%), Postives = 69/156 (44.23%), Query Frame = 0


Query: 74  EILGKNIFI----FRFENEGERNRVFRQGPWSFDKFLLVLEFPIRGLK-PSDYRFSSVAF 133
           E++G+ + I    F F++E     + R+GPWSF+ ++ V++   R  K  SD  F  + F
Sbjct: 51  EVVGRILEIHKIEFLFQSEESMFSILRRGPWSFNDWMCVIQ---RWTKLHSDAEFKRIPF 110

Query: 134 WIHFYDLPLDWYNQEMAERLGNALGEYEDVDSRNGFHHLGASMRVRVRLDISRPLRRGVK 193
           WI    +PL +    +  R+  ++GE                   R+ L +   L R V 
Sbjct: 111 WIQIRGIPLRF----LTARIITSIGE-------------------RMGLFLETNLGRDVS 170

Query: 194 IILDDSIGGSWIAVQYERLPEFCFFCGIIGHILKDC 225
           +          +  QYE+L  FC  CG++ H   +C
Sbjct: 171 V----------LKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:

BLAST of Lag0023138 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156185.1	6.6e-61	48.71	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
XP_022132681.1	1.0e-53	44.78	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_022158377.1	3.8e-48	42.86	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_028124075.1	3.8e-40	39.01	uncharacterized protein LOC114321128 [Camellia sinensis]	[more]
XP_028122006.1	6.5e-40	40.09	uncharacterized protein LOC114319195 [Camellia sinensis]	[more]

BLAST of Lag0023138 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0023138 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DU55	3.2e-61	48.71	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1BSZ1	5.0e-54	44.78	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A6J1DX30	1.8e-48	42.86	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1D765	1.5e-37	36.53	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A2N9GWE9	1.5e-37	36.65	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31787 PE=4 SV=1	[more]

BLAST of Lag0023138 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G31430.1	7.2e-13	28.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G13450.1	8.8e-11	26.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G42140.1	1.4e-08	26.28	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 177..224 e-value: 1.6E-14 score: 53.3
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 35..175 e-value: 3.3E-27 score: 94.8
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 43..224
None	No IPR available	PANTHER	PTHR31286:SF37	SUBFAMILY NOT NAMED	coord: 43..224
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 211..224 score: 8.943958

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0023138.1	Lag0023138.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding