Lag0023016 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0023016
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr7: 42944056 .. 42947314 (+)
RNA-Seq ExpressionLag0023016
SyntenyLag0023016
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGGTATCCAGACTCGATTATTTCTCCTTCCCAATCAGCTTTTGTCCCTGGGAGACAAATTTCAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGTACGTTTTTTTGTTGTGTGCAGAGGGCTTTTCAAGCCTACTCAACAAGGAAGAATCTCTTTCAAACTTTTGTGGTCTTCGTATAAATAACCATTGCCCCTCTATTTCCCATTTATTTTTTTGTTAATGATAGTTTTATTTTTTGTAGGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATGTGTTTTAAAATCCTTAGTGAAGAAATCTTGAAACATTTTTTTTAAATAATGTTTTTTTTTCATTTTGTAACTCAAAAAATATGGAGAAACCAAAATTTTGTATTTTTCCGATCAAATCTTCTAAGATTGGGACAAAAAAAAGTCACTGCTAATTCAACTAAGCATATCGGAGATATTGTAATATTGTTACCTTGATTTATGGTGGTAGTTTTACATTGTTGTTAAGGTTTTGTTGTACATTGTTATTATTGTTAGTTGTTTACTATTTGTAGTGCTCATCTACTTGTATTTAAGTGTGGTTCTCTATTCCACAATTCAATGAGAAGAACTATCTATTTCCTCTCTATTACTTTGAAATGGTATCGGAGCAAAGTTCTGTCTAATTTTTTTTTCTCCACATTTTTTTCTCGAAGCTTTGTGCTTTGTTCTTCCTTGTTTATTTTTCCATGGCGAACAAAGACAACCCCAATGGTGATGATTCGTTGGATCTTGATGCCCAACTGAATCCTTTTCTTTTCATCATTCATTCGTTTCGACGACCACTCTTGTCAATCACCTCTAATTGGTTCAGATAATTATGTTTCTTGGAGCAGAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAGTAACGGGCCGAAGATTTATCAATTGCGAAAAAATTGATTACAACTTTTCAAGGTACTCTTTCCATTGAAGTTTACTTTACCAAATTGAAGACAATTTGCAGAATCTTAGGGCCTGTTTGGTAGGCAATCCGGATCCTGTTTTATGTTTTCAGATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTGTATCCAGATTTTGAATTTCAAAATTTTAAATGCATAATAATTTAAAAAAGATAAAACTTTAATAAATATAGTATTCCATATTATAACTCAATTTATTTTTGTAAATTAGAATTTGTATAATATAATGTATTATAAATTATATGATATTGTAAAATAATAATAATAATAAATTATAATACATAACATTTTATAAATTAATTAATAATATTTTATATTCAACTTAGTATTTAGTTGATAACTACAAATAATTTATCGTTTATAAATATATTGTCAAACACATTTTGAACCATTATTTAAATTCATATCCAATTTCTGAATCTGCTACCAACACATATCTGAAAACATGAAATACAACTCTGTTTTCATTGAATCCCTTGTTTTCAAATTCCTGTTTTCAGATCACCAACCAAACGGACCCTTAGTGATTTTCGCCCTACTATTGATTGCTCTTGTGGAAAACTCAAAACATTTCTTGATCATTTAGAGTCCGAGTTTATTATGGTGTTCTTAATGGGGCTTAATGGGGCTTAATGAGCAATATGCAGCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTAAGAAAGATACTTCTCGAGATGAACAACAAAGGCCTATTTGTTCTCACTATGGCATCCGTGGTCACACTGTTGGCAGGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA

mRNA sequence

ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA

Coding sequence (CDS)

ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA

Protein sequence

MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPKKMEDFRPISLCNVSYKIIAKVLANRLKDNVVIGFECIHAINSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILINGFSYGSSVLNRGIRQGDPLSSALDKDCRSIREILKVYEWASGQTINLEKSVFMASKKLRPGRFESLVRFLIAMLMALSGKNKEGFVDGTIKKPTNTKMVKMWKCNNDIIASWIMNSVSKEIAASIVYTGCVKEVWDELFDRFKENSLNSVNMRLVDVFLKTVFGFCDPNSENSENNFLCFRSIRTQILLMNPIPSISKVFALVIQEERQRNASNVISQSNPVALLATNASKKGSSQTNQSRVTKPTVILLGTEPEIKIQIWQAIPNQWGPTLLLKLHNLLPPIFFSSLNASQCSQLMELLNSQLQAAETEPITTATFVVHTSGICSITSSPIDSNVWIVDSSASQHISHCHHMFHNWRRVCGMSVILPTSQQVHVDYIGDIRLSQDLTLHDVLYVPRF
Homology
BLAST of Lag0023016 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 238.0 bits (606), Expect = 1.9e-58
Identity = 154/386 (39.90%), Postives = 217/386 (56.22%), Query Frame = 0

Query: 232 AMLMALSGKNKEGFVDGTIKKPTNTKMVKMWKCNNDIIASWIMNSVSKEIAASIVYTGCV 291
           AMLMA+SG+NK GF+ G I+KP++  ++  W CNNDI+ASWI+NSVSKEIAASI+Y G +
Sbjct: 58  AMLMAISGRNKAGFITGKIQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSI 117

Query: 292 KEVWDELFDRFKEN-------------SLNSVNMRLVDVF--LKTVF------------- 351
           KE+WDEL  RFK++             +L   N+ +   +  LKT++             
Sbjct: 118 KEIWDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCT 177

Query: 352 -GFCDPNSENSENNFL---------CFRSIRTQILLMNPIPSISKVFALVIQEERQRNAS 411
            G   P  ++ E+ ++          + ++R QILLM P+PSI+ VF+L+IQEE+QR+A 
Sbjct: 178 CGGLKPFIDHLESEYIMAFLMGLNDSYAAVRAQILLMQPLPSINTVFSLLIQEEQQRSAG 237

Query: 412 NVISQSNPVALLATNASKKGSSQTNQSRVTKPTVILLGTEPEIKIQIWQ--AIPNQWGPT 471
            +    +PVAL    AS    S     +  +PT    G +  I  + ++    P  + P 
Sbjct: 238 ILTPPIDPVAL--NIASSMAISTDRNRKKERPTCSYCGIKGHIADKCYKKHGYPPGYKPR 297

Query: 472 L---------LLKLHNLL---------PPIFFSSLNASQCSQLMELLNSQLQAAETEPIT 531
                       K +N+           P FFSSLN+ Q SQLM LLN+ LQAA T PIT
Sbjct: 298 NSNSITTAPDTSKTNNVANTNSAAANRSPDFFSSLNSEQYSQLMTLLNNHLQAATTAPIT 357

Query: 532 TATFVVHTSGICSITSSPIDS-NVWIVDSSASQHISHCHHMFHNWRRVCGMSVILPTSQQ 559
           TAT + HTSGI ++TS    S + WI+DS AS+HI H   +F NW     M V+LP   +
Sbjct: 358 TATAITHTSGIFALTSHNNQSHDEWIIDSGASRHICHDKSLFKNWSHTNNMFVMLPNGHR 417

BLAST of Lag0023016 vs. NCBI nr
Match: XP_010673168.1 (PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 233.4 bits (594), Expect = 4.7e-57
Identity = 134/335 (40.00%), Postives = 192/335 (57.31%), Query Frame = 0

Query: 1    MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
            M+PSKAPG DG+ A+FYQ +WH+VG++ T++   I++G    + LN T IAL+PKV SP 
Sbjct: 827  MHPSKAPGPDGMHAVFYQRFWHIVGDDVTSVVAGIIHGTRPPDALNNTNIALIPKVKSPT 886

Query: 61   KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
             + +FRPISLCNV +K++ KVLANRLK                     DN +I  E  H+
Sbjct: 887  LVSEFRPISLCNVIFKLVTKVLANRLKTILPGVVSENQSAFVPGRLITDNALIALELFHS 946

Query: 121  INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
            +  R KG +G VAMKLDMSKAYDRVEWSF+R  ++K+GF ++W+  VM CV +V+YS ++
Sbjct: 947  MKYRCKGNRGFVAMKLDMSKAYDRVEWSFLRSLLDKMGFADSWVKCVMDCVSSVRYSFVV 1006

Query: 181  NGFSYGSSVLNRGIRQGDPLS-----------SAL------DK------DCRSIREILKV 240
            NG   GS + +RG+RQGDP+S           SAL      DK      +C  I +IL  
Sbjct: 1007 NGDVCGSVIPSRGLRQGDPISPYLFILVADAFSALVRKAVADKSIHGIQECSVIVDILNK 1066

Query: 241  YEWASGQTINLEKSVFMASKKLRPGRFESLVRFLIAM----------LMALSGKNKE--- 278
            YE ASGQ IN+EKS    SK +   + + LV FL             +  L+G++K+   
Sbjct: 1067 YEAASGQKINIEKSEVSFSKGVSSVQKKELVEFLAMRQVDRHSKYLGIPTLAGRSKQHLF 1126

BLAST of Lag0023016 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 226.9 bits (577), Expect = 4.4e-55
Identity = 121/297 (40.74%), Postives = 170/297 (57.24%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M+P+KAPG DG+ A+F+Q YW++VGN+   + L +LN    +  +N+T I LVPK+ +P 
Sbjct: 280 MHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNITLVPKIKNPT 339

Query: 61  KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
           KM DFRPISLCNV YK+I+KVLANRLK                     DNV++ FE +H 
Sbjct: 340 KMSDFRPISLCNVVYKLISKVLANRLKNILPQIISENQSAFLSGRLITDNVLVAFELMHY 399

Query: 121 INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
           +  +K+G++G  A+KLDMSKAYDRVEW F+++ M K+GF E WI +VM C+ +V YSIL+
Sbjct: 400 LEHKKEGKEGFAAIKLDMSKAYDRVEWGFIKQVMEKMGFHEKWIKLVMHCITSVSYSILV 459

Query: 181 NGFSYGSSVLNRGIRQGDPLS--------------------------------------- 227
           NG +YGS    RG+RQGDP+S                                       
Sbjct: 460 NGGAYGSITPTRGLRQGDPISPYIFLLCADGFSSLLNDVARKLRISGVSICRGCPKITHL 519

BLAST of Lag0023016 vs. NCBI nr
Match: XP_030939512.1 (uncharacterized protein LOC115964316 [Quercus lobata])

HSP 1 Score: 226.1 bits (575), Expect = 7.5e-55
Identity = 127/280 (45.36%), Postives = 161/280 (57.50%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M P+KAPG DG+ ALFYQ +WHVVG+   +  L  LN    +  +N T I L+PKV +P+
Sbjct: 249 MGPTKAPGPDGMNALFYQRFWHVVGDTVVDAVLDFLNNGHMLPDINHTYIVLIPKVKNPE 308

Query: 61  KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
           KM DFRPISLCNV YKII+KVLANRLK                     DNV+I +E +H 
Sbjct: 309 KMSDFRPISLCNVIYKIISKVLANRLKQVLPSIISSTQSAFVPGRLITDNVLIAYETLHT 368

Query: 121 INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
           ++ RKKG+KG +A+KLD+SKAYDRVEW F++  + +LGF E WI  VMSCV T  +S+L+
Sbjct: 369 MHCRKKGKKGYMALKLDVSKAYDRVEWPFLQGVLQRLGFPETWIERVMSCVTTTSFSVLV 428

Query: 181 NGFSYGSSVLNRGIRQGDPLS------------SALDKD-----------CRS------- 211
           NG  +G+ + +RGIRQGDPLS            S LD+            CRS       
Sbjct: 429 NGRPFGNVLPSRGIRQGDPLSPYLFLLCTEGFTSLLDRAESGGSLHGVSICRSAPKITNL 488

BLAST of Lag0023016 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber])

HSP 1 Score: 225.3 bits (573), Expect = 1.3e-54
Identity = 125/280 (44.64%), Postives = 159/280 (56.79%), Query Frame = 0

Query: 1    MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
            M P+KAPG DG+ ALFYQ +WHVVG+   +  L  LN       +N T I L+PKV +P+
Sbjct: 738  MGPTKAPGPDGMNALFYQKFWHVVGDTVVDAVLDFLNNGHMAPDINHTYIVLIPKVKNPE 797

Query: 61   KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            KM DFRPISLCNV YKII+KVL NRLK                     DNV++ +E +H 
Sbjct: 798  KMSDFRPISLCNVIYKIISKVLVNRLKQVLPNIISPTQSAFVPGRLITDNVLLAYETLHT 857

Query: 121  INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
            ++SRKKG+KG +A+KLD+SKAYDRVEW F++  M +LGF E WI  VMSCV T  +S+L+
Sbjct: 858  MHSRKKGKKGYMALKLDVSKAYDRVEWPFLQGIMQRLGFPETWIERVMSCVTTTSFSVLV 917

Query: 181  NGFSYGSSVLNRGIRQGDPLS------------SALDK---------------------- 211
            NG  +G+   +RGIRQGDPLS            S LD+                      
Sbjct: 918  NGRPFGNVRPSRGIRQGDPLSPYLFLLCTEGFTSLLDRAVTGETLHGVAICRNAPKITNL 977

BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 4.9e-17
Identity = 65/201 (32.34%), Postives = 96/201 (47.76%), Query Frame = 0

Query: 5   KAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVH-SPKKME 64
           K+PG DG  A FYQ +   +      L  +I       N      I L+PK    P K+E
Sbjct: 476 KSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIE 535

Query: 65  DFRPISLCNVSYKIIAKVLANRLKDNV-------VIGF--------------ECIHAINS 124
           +FRPISL N+  KI+ K+LANR+++++        +GF                IH IN 
Sbjct: 536 NFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINK 595

Query: 125 RKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILINGF 184
            K   K  + + LD  KA+D+++  FM K + + G Q  ++NM+ +       +I +NG 
Sbjct: 596 LK--DKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGE 655

BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.5e-16
Identity = 65/205 (31.71%), Postives = 96/205 (46.83%), Query Frame = 0

Query: 5   KAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEER----INRLNRTIIALVPKV-HSP 64
           K+PG DG  A FYQ Y      E     L++    E+     N      I L+PK     
Sbjct: 469 KSPGPDGFTAEFYQRY----KEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDT 528

Query: 65  KKMEDFRPISLCNVSYKIIAKVLANRLKDNV-------VIGF--------------ECIH 124
            K E+FRPISL N+  KI+ K+LANR++ ++        +GF                I 
Sbjct: 529 TKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQ 588

Query: 125 AINSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSIL 184
            IN  K   K  V + +D  KA+D+++  FM K +NKLG    ++ ++ +  +    +I+
Sbjct: 589 HINRAK--DKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANII 648

BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 6.0e-15
Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M  +K+PG+DGL   F+Q +W  +G +   +  +     E      R +++L+PK    +
Sbjct: 461 MPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLR 520

Query: 61  KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            ++++RP+SL +  YKI+AK ++ RLK                     DNV +  + +H 
Sbjct: 521 LIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLHF 580

Query: 121 INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
             +R+ G   L  + LD  KA+DRV+  ++   +    F   ++  + +   + +  + I
Sbjct: 581 --ARRTG-LSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKI 640

Query: 181 NGFSYGSSVLNRGIRQGDPLSSAL 184
           N          RG+RQG PLS  L
Sbjct: 641 NWSLTAPLAFGRGVRQGCPLSGQL 661

BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-14
Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 0

Query: 5   KAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTI----IALVPKV-HSP 64
           K+PG DG  + FYQ +      E   + L +    E+   L  T     I L+PK    P
Sbjct: 468 KSPGPDGFTSEFYQTF----KEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDP 527

Query: 65  KKMEDFRPISLCNVSYKIIAKVLANRLKDNV-------VIGF--------------ECIH 124
            + E++RPISL N+  KI+ K+L NR++ ++        +GF                I 
Sbjct: 528 TRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQ 587

Query: 125 AINSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSIL 184
            IN  K   K  + + +D  KA+D ++  FM + + K+G +  ++ ++ +       +I+
Sbjct: 588 HINKLK--NKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANII 647

BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P16423 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.1e-07
Identity = 54/196 (27.55%), Postives = 88/196 (44.90%), Query Frame = 0

Query: 4   SKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPKKME 63
           S +PG DG+     +     +     NL L   N    I RL RT+   +PK  + K+ +
Sbjct: 357 SSSPGPDGITPKSAREVPSGIMLRIMNLILWCGNLPHSI-RLARTV--FIPKTVTAKRPQ 416

Query: 64  DFRPISLCNVSYKIIAKVLANRLKDNV-----VIGF----ECIH-------AINSRKKGQ 123
           DFRPIS+ +V  + +  +LA RL  ++       GF     C          +    K  
Sbjct: 417 DFRPISVPSVLVRQLNAILATRLNSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHF 476

Query: 124 KGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILINGFSYGSS 183
           +      LD+SKA+D +  + +   +   G  + +++ V +  E    S+  +G+S    
Sbjct: 477 RSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEF 536

BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 9.3e-59
Identity = 154/386 (39.90%), Postives = 217/386 (56.22%), Query Frame = 0

Query: 232 AMLMALSGKNKEGFVDGTIKKPTNTKMVKMWKCNNDIIASWIMNSVSKEIAASIVYTGCV 291
           AMLMA+SG+NK GF+ G I+KP++  ++  W CNNDI+ASWI+NSVSKEIAASI+Y G +
Sbjct: 58  AMLMAISGRNKAGFITGKIQKPSDGVLLDAWICNNDILASWILNSVSKEIAASIIYIGSI 117

Query: 292 KEVWDELFDRFKEN-------------SLNSVNMRLVDVF--LKTVF------------- 351
           KE+WDEL  RFK++             +L   N+ +   +  LKT++             
Sbjct: 118 KEIWDELRQRFKQSNGPSIYQLRKEFVTLRQGNLTIETYYTKLKTIWQNLNEYRFTNDCT 177

Query: 352 -GFCDPNSENSENNFL---------CFRSIRTQILLMNPIPSISKVFALVIQEERQRNAS 411
            G   P  ++ E+ ++          + ++R QILLM P+PSI+ VF+L+IQEE+QR+A 
Sbjct: 178 CGGLKPFIDHLESEYIMAFLMGLNDSYAAVRAQILLMQPLPSINTVFSLLIQEEQQRSAG 237

Query: 412 NVISQSNPVALLATNASKKGSSQTNQSRVTKPTVILLGTEPEIKIQIWQ--AIPNQWGPT 471
            +    +PVAL    AS    S     +  +PT    G +  I  + ++    P  + P 
Sbjct: 238 ILTPPIDPVAL--NIASSMAISTDRNRKKERPTCSYCGIKGHIADKCYKKHGYPPGYKPR 297

Query: 472 L---------LLKLHNLL---------PPIFFSSLNASQCSQLMELLNSQLQAAETEPIT 531
                       K +N+           P FFSSLN+ Q SQLM LLN+ LQAA T PIT
Sbjct: 298 NSNSITTAPDTSKTNNVANTNSAAANRSPDFFSSLNSEQYSQLMTLLNNHLQAATTAPIT 357

Query: 532 TATFVVHTSGICSITSSPIDS-NVWIVDSSASQHISHCHHMFHNWRRVCGMSVILPTSQQ 559
           TAT + HTSGI ++TS    S + WI+DS AS+HI H   +F NW     M V+LP   +
Sbjct: 358 TATAITHTSGIFALTSHNNQSHDEWIIDSGASRHICHDKSLFKNWSHTNNMFVMLPNGHR 417

BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9J6K4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59981 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.6e-55
Identity = 118/265 (44.53%), Postives = 162/265 (61.13%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M+PSKAPG DG+ ALF+Q +WH+VG + T+  L  LN    +  LN T IAL+PKV SP+
Sbjct: 323 MSPSKAPGPDGMTALFFQKFWHIVGMDVTDSILDFLNNGHMLKSLNYTHIALIPKVKSPE 382

Query: 61  KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            M  FRPISLCNV YKII+KVL NR+K                     DN++I FE +H 
Sbjct: 383 LMTQFRPISLCNVLYKIISKVLVNRMKTILPFVVSDSQSAFVPGRMISDNIMIAFEILHH 442

Query: 121 INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
           + +++ G+   +A+KLDMSKAYDRVEW +++K M KLGF   W+ ++M CV +V YSIL+
Sbjct: 443 LKNKRVGKVPQMAVKLDMSKAYDRVEWDYLKKMMLKLGFTARWVALIMECVTSVSYSILV 502

Query: 181 NGFSYGSSVLNRGIRQGDPLS---------------SALDKDCRSIREILKVYEWASGQT 230
           NG   G    +RG+RQGDPLS               +A D +C+++++IL +YE ASGQ 
Sbjct: 503 NGEPKGYVKPSRGLRQGDPLSPYLFLICAEGLTAFIAATDTECQALQDILTLYESASGQK 562

BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9EK17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7109 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-55
Identity = 121/285 (42.46%), Postives = 163/285 (57.19%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M+P+KAPG DG+ ALF+Q YWH+VGN+     L  L     +  LN T IAL+PKV   +
Sbjct: 1   MHPTKAPGPDGMSALFFQKYWHIVGNDVLTAVLDCLRSGHILKSLNSTNIALIPKVGKAE 60

Query: 61  KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            +  FRPISLCNV YKII+KVLANR+K                     DN++I FE +H 
Sbjct: 61  SLSQFRPISLCNVVYKIISKVLANRMKSILSVVISDYQSAFVPERLITDNILIAFEVMHY 120

Query: 121 INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
           +N++++G+   +A KLDMSKAYDRVEW++++  M K+GF+  W+N++M C+ TV YS+LI
Sbjct: 121 LNTKRQGKTAHMAAKLDMSKAYDRVEWNYLQAVMLKMGFESRWVNLIMECLSTVNYSVLI 180

Query: 181 NGFSYGSSVLNRGIRQGDPLS------------------------SALDKDCRSIREILK 240
           NG  +G    +RG+RQGDPLS                         AL  D  +++EIL 
Sbjct: 181 NGEPHGYIRPSRGLRQGDPLSPYLFLICAEGLSALFRAAERERRLCALQSDSMALKEILH 240

BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9J109 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.8e-54
Identity = 114/253 (45.06%), Postives = 157/253 (62.06%), Query Frame = 0

Query: 1    MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
            M P  APG DGL  +FYQN+WH++G +     L  LN  + +  +N T I L+PKV +P+
Sbjct: 774  MAPLTAPGPDGLPPVFYQNHWHLIGEDVIRGVLSSLNSGKLVRSINHTNITLIPKVKNPE 833

Query: 61   KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            K+ +FRPISLCNV YKII+KV+ANRLK                     DN+++ FE +H 
Sbjct: 834  KVSEFRPISLCNVLYKIISKVVANRLKVILPHLISETQSAFVLGRLITDNILVAFETLHH 893

Query: 121  INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
            + S ++G++G +A+KLDMSKAYDRVEWSF+   M KLGF   +I+++M C+ TV YSILI
Sbjct: 894  MQSTRQGKRGHMALKLDMSKAYDRVEWSFLSSLMGKLGFNHKFIDLIMECISTVSYSILI 953

Query: 181  NGFSYGSSVLNRGIRQGDPLS----------------SALDKDCRSIREILKVYEWASGQ 217
            NG  +G+   +RGIRQGDPLS                 A   +C++I+ IL +YE ASGQ
Sbjct: 954  NGIPHGNFTPSRGIRQGDPLSPYLFILCAEDDSLLFCRASRVECQNIQAILSLYETASGQ 1013

BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9HDH5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.5e-53
Identity = 109/231 (47.19%), Postives = 147/231 (63.64%), Query Frame = 0

Query: 1    MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
            M+PSKAPG DG+ + F+Q YWH+VG   TN  L ILN  + + ++N T ++L+PK  +P+
Sbjct: 911  MHPSKAPGSDGMSSFFFQKYWHIVGTSITNAVLSILNSGKILRKINLTYLSLIPKKKNPE 970

Query: 61   KMEDFRPISLCNVSYKIIAKVLANRLK---------------------DNVVIGFECIHA 120
            K+ D+RPISLCNV YKII+KVLANRLK                     DNV + FE +H 
Sbjct: 971  KLSDYRPISLCNVLYKIISKVLANRLKSVLSVIISDSQSAFVPGRLITDNVAVAFEVLHK 1030

Query: 121  INSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILI 180
            + ++++G++G +A+KLDMSKAYDRVEWSF+   M KLGF E WI M+M C+ TVQYSI++
Sbjct: 1031 MKAKRRGRQGEMAVKLDMSKAYDRVEWSFVEAIMKKLGFAEKWIAMIMECIGTVQYSIML 1090

Query: 181  NGFSYGSSVLNRGIRQGDPLSSALDKDCRSIREILKVYEWASGQTINLEKS 211
            +G   G  + +RGIRQGDP+S  L   C      L       GQ   L+ S
Sbjct: 1091 DGVPKGFIIPSRGIRQGDPISPYLFLLCAEGLSALLKKSSLEGQLKGLQTS 1141

BLAST of Lag0023016 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08
Identity = 30/78 (38.46%), Postives = 39/78 (50.00%), Query Frame = 0

Query: 1   MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPK 60
           M  +KAPG D   A F+   W VV + T     +       + R N T I L+PKV    
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602

Query: 61  KMEDFRPISLCNVSYKII 79
           ++  FRP+S C V YKII
Sbjct: 603 QLSMFRPVSCCTVVYKII 620

BLAST of Lag0023016 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 55.5 bits (132), Expect = 1.6e-07
Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0

Query: 88  DNVVIGFECIHAINSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWI 144
           DN+V   E +H++  RKKG KG + +KLD+ KAYDR+ W ++   +   GF E W+
Sbjct: 28  DNIVFVQEAVHSMR-RKKGVKGWMLLKLDLEKAYDRIRWDYLEDTLISAGFPEVWL 82

BLAST of Lag0023016 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.7e-04
Identity = 21/76 (27.63%), Postives = 43/76 (56.58%), Query Frame = 0

Query: 224 ESLVRFLIAMLMALSGKNKEGFVDGTIKKPTN-TKMVKMWKCNNDIIASWIMNSVSKEIA 283
           ++ V + I     L    K GF+DGT+ KP   + + + W+  N ++  W+MNS++ ++ 
Sbjct: 40  DNYVAWKIRFRSFLRVTKKFGFIDGTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLL 99

Query: 284 ASIVYTGCVKEVWDEL 299
            S++Y     ++W++L
Sbjct: 100 ESVMYAETAHKMWEDL 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065480.11.9e-5839.90Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >T... [more]
XP_010673168.14.7e-5740.00PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp. vulgaris][more]
XP_023881891.14.4e-5540.74uncharacterized protein LOC111994244 [Quercus suber][more]
XP_030939512.17.5e-5545.36uncharacterized protein LOC115964316 [Quercus lobata][more]
XP_023908235.11.3e-5444.64uncharacterized protein LOC112019924 [Quercus suber][more]
Match NameE-valueIdentityDescription
P113694.9e-1732.34LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
O003702.5e-1631.71LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P143816.0e-1526.47Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P085481.8e-1428.78LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
P164236.1e-0727.55Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS... [more]
Match NameE-valueIdentityDescription
A0A5A7VE669.3e-5939.90Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A2N9J6K41.6e-5544.53Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9EK173.6e-5542.46Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9J1091.8e-5445.06Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1[more]
A0A2N9HDH51.5e-5347.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G43760.11.9e-0838.46DNAse I-like superfamily protein [more]
AT4G20520.11.6e-0742.86RNA binding;RNA-directed DNA polymerases [more]
AT1G21280.11.7e-0427.63CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 450..470
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 1..212
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 1..212
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 232..253
e-value: 8.8E-7
score: 28.6
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 59..183
e-value: 8.4E-20
score: 71.2
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0023016.1Lag0023016.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0003824 catalytic activity