Lag0023016 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGGTATCCAGACTCGATTATTTCTCCTTCCCAATCAGCTTTTGTCCCTGGGAGACAAATTTCAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGTACGTTTTTTTGTTGTGTGCAGAGGGCTTTTCAAGCCTACTCAACAAGGAAGAATCTCTTTCAAACTTTTGTGGTCTTCGTATAAATAACCATTGCCCCTCTATTTCCCATTTATTTTTTTGTTAATGATAGTTTTATTTTTTGTAGGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATGTGTTTTAAAATCCTTAGTGAAGAAATCTTGAAACATTTTTTTTAAATAATGTTTTTTTTTCATTTTGTAACTCAAAAAATATGGAGAAACCAAAATTTTGTATTTTTCCGATCAAATCTTCTAAGATTGGGACAAAAAAAAGTCACTGCTAATTCAACTAAGCATATCGGAGATATTGTAATATTGTTACCTTGATTTATGGTGGTAGTTTTACATTGTTGTTAAGGTTTTGTTGTACATTGTTATTATTGTTAGTTGTTTACTATTTGTAGTGCTCATCTACTTGTATTTAAGTGTGGTTCTCTATTCCACAATTCAATGAGAAGAACTATCTATTTCCTCTCTATTACTTTGAAATGGTATCGGAGCAAAGTTCTGTCTAATTTTTTTTTCTCCACATTTTTTTCTCGAAGCTTTGTGCTTTGTTCTTCCTTGTTTATTTTTCCATGGCGAACAAAGACAACCCCAATGGTGATGATTCGTTGGATCTTGATGCCCAACTGAATCCTTTTCTTTTCATCATTCATTCGTTTCGACGACCACTCTTGTCAATCACCTCTAATTGGTTCAGATAATTATGTTTCTTGGAGCAGAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAGTAACGGGCCGAAGATTTATCAATTGCGAAAAAATTGATTACAACTTTTCAAGGTACTCTTTCCATTGAAGTTTACTTTACCAAATTGAAGACAATTTGCAGAATCTTAGGGCCTGTTTGGTAGGCAATCCGGATCCTGTTTTATGTTTTCAGATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTGTATCCAGATTTTGAATTTCAAAATTTTAAATGCATAATAATTTAAAAAAGATAAAACTTTAATAAATATAGTATTCCATATTATAACTCAATTTATTTTTGTAAATTAGAATTTGTATAATATAATGTATTATAAATTATATGATATTGTAAAATAATAATAATAATAAATTATAATACATAACATTTTATAAATTAATTAATAATATTTTATATTCAACTTAGTATTTAGTTGATAACTACAAATAATTTATCGTTTATAAATATATTGTCAAACACATTTTGAACCATTATTTAAATTCATATCCAATTTCTGAATCTGCTACCAACACATATCTGAAAACATGAAATACAACTCTGTTTTCATTGAATCCCTTGTTTTCAAATTCCTGTTTTCAGATCACCAACCAAACGGACCCTTAGTGATTTTCGCCCTACTATTGATTGCTCTTGTGGAAAACTCAAAACATTTCTTGATCATTTAGAGTCCGAGTTTATTATGGTGTTCTTAATGGGGCTTAATGGGGCTTAATGAGCAATATGCAGCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTAAGAAAGATACTTCTCGAGATGAACAACAAAGGCCTATTTGTTCTCACTATGGCATCCGTGGTCACACTGTTGGCAGGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA ATGAATCCTTCGAAAGCGCCCGGTATGGATGGTCTTCAAGCCCTTTTTTACCAAAATTACTGGCATGTGGTTGGCAATGAGACAACAAATCTATGTTTACAAATCCTCAATGGGGAAGAAAGAATAAACAGATTAAACAGAACGATCATAGCTCTTGTTCCCAAGGTTCACAGTCCAAAGAAGATGGAGGATTTCAGACCCATAAGCCTTTGCAACGTCAGTTATAAAATTATTGCAAAGGTCCTAGCCAACAGACTTAAAGACAACGTGGTTATTGGCTTTGAATGCATTCACGCAATCAACTCCAGAAAAAAGGGTCAGAAGGGCCTCGTGGCCATGAAACTCGACATGAGCAAAGCTTATGATCGAGTCGAATGGTCTTTTATGAGAAAATTCATGAACAAGCTTGGTTTCCAGGAGAATTGGATCAACATGGTGATGAGTTGTGTTGAAACAGTGCAATACTCTATTCTCATCAACGGTTTCTCTTATGGATCCTCGGTCCTGAATCGAGGCATAAGACAAGGCGACCCATTATCCTCGGCGCTGGATAAGGACTGCAGGAGTATCAGAGAAATTCTTAAGGTGTATGAGTGGGCGTCGGGCCAAACAATTAACCTGGAGAAATCAGTGTTCATGGCTAGCAAGAAGTTGAGGCCGGGAAGATTCGAGAGTTTAGTGAGATTCCTTATAGCTATGTTAATGGCCCTCTCCGGTAAGAATAAGGAAGGCTTTGTCGATGGAACCATCAAGAAGCCGACCAACACAAAAATGGTGAAAATGTGGAAGTGCAACAATGACATCATAGCTTCTTGGATCATGAATTCTGTTTCCAAGGAGATTGCTGCCAGCATTGTATATACTGGATGTGTAAAAGAAGTATGGGATGAGCTTTTCGATCGTTTCAAGGAAAATTCACTGAATTCAGTGAATATGCGTTTGGTAGACGTGTTTCTGAAAACTGTTTTCGGATTCTGTGATCCAAATAGTGAAAATTCTGAAAACAACTTTTTATGTTTTCGTTCGATTAGAACTCAAATCTTATTGATGAATCCTATCCCTTCCATTAGTAAGGTATTTGCATTAGTGATTCAAGAAGAACGTCAAAGAAATGCTAGCAATGTTATTTCACAGTCTAATCCAGTTGCGTTACTTGCTACCAATGCATCTAAGAAAGGATCATCACAAACTAATCAATCTCGTGTTACAAAACCCACTGTTATCCTCTTGGGTACCGAACCAGAAATCAAAATTCAAATATGGCAAGCAATTCCAAACCAATGGGGACCAACACTGTTACTCAAGCTCCACAACCTGCTGCCACCAATTTTTTTTTCTAGCCTGAATGCTAGTCAATGTTCTCAGTTGATGGAACTTCTAAATTCACAGTTGCAAGCAGCAGAAACTGAGCCTATCACAACAGCCACATTTGTTGTTCATACATCAGGTATCTGCTCTATTACTTCTTCACCAATTGATTCAAACGTATGGATAGTTGATTCTAGTGCGTCTCAACATATATCTCATTGCCATCATATGTTTCATAATTGGCGTCGTGTATGTGGTATGTCTGTTATTCTGCCAACTTCACAACAAGTACATGTTGATTATATTGGTGACATAAGGCTTTCTCAAGACTTGACTCTTCATGACGTGCTATATGTTCCACGGTTCTGA MNPSKAPGMDGLQALFYQNYWHVVGNETTNLCLQILNGEERINRLNRTIIALVPKVHSPKKMEDFRPISLCNVSYKIIAKVLANRLKDNVVIGFECIHAINSRKKGQKGLVAMKLDMSKAYDRVEWSFMRKFMNKLGFQENWINMVMSCVETVQYSILINGFSYGSSVLNRGIRQGDPLSSALDKDCRSIREILKVYEWASGQTINLEKSVFMASKKLRPGRFESLVRFLIAMLMALSGKNKEGFVDGTIKKPTNTKMVKMWKCNNDIIASWIMNSVSKEIAASIVYTGCVKEVWDELFDRFKENSLNSVNMRLVDVFLKTVFGFCDPNSENSENNFLCFRSIRTQILLMNPIPSISKVFALVIQEERQRNASNVISQSNPVALLATNASKKGSSQTNQSRVTKPTVILLGTEPEIKIQIWQAIPNQWGPTLLLKLHNLLPPIFFSSLNASQCSQLMELLNSQLQAAETEPITTATFVVHTSGICSITSSPIDSNVWIVDSSASQHISHCHHMFHNWRRVCGMSVILPTSQQVHVDYIGDIRLSQDLTLHDVLYVPRF Homology
BLAST of Lag0023016 vs. NCBI nr
Match: KAA0065480.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK08721.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 238.0 bits (606), Expect = 1.9e-58 Identity = 154/386 (39.90%), Postives = 217/386 (56.22%), Query Frame = 0
BLAST of Lag0023016 vs. NCBI nr
Match: XP_010673168.1 (PREDICTED: uncharacterized protein LOC104889608 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 233.4 bits (594), Expect = 4.7e-57 Identity = 134/335 (40.00%), Postives = 192/335 (57.31%), Query Frame = 0
BLAST of Lag0023016 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber]) HSP 1 Score: 226.9 bits (577), Expect = 4.4e-55 Identity = 121/297 (40.74%), Postives = 170/297 (57.24%), Query Frame = 0
BLAST of Lag0023016 vs. NCBI nr
Match: XP_030939512.1 (uncharacterized protein LOC115964316 [Quercus lobata]) HSP 1 Score: 226.1 bits (575), Expect = 7.5e-55 Identity = 127/280 (45.36%), Postives = 161/280 (57.50%), Query Frame = 0
BLAST of Lag0023016 vs. NCBI nr
Match: XP_023908235.1 (uncharacterized protein LOC112019924 [Quercus suber]) HSP 1 Score: 225.3 bits (573), Expect = 1.3e-54 Identity = 125/280 (44.64%), Postives = 159/280 (56.79%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 4.9e-17 Identity = 65/201 (32.34%), Postives = 96/201 (47.76%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 2.5e-16 Identity = 65/205 (31.71%), Postives = 96/205 (46.83%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 6.0e-15 Identity = 54/204 (26.47%), Postives = 96/204 (47.06%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.8e-14 Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy Swiss-Prot
Match: P16423 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 6.1e-07 Identity = 54/196 (27.55%), Postives = 88/196 (44.90%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A5A7VE66 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76G00250 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 9.3e-59 Identity = 154/386 (39.90%), Postives = 217/386 (56.22%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9J6K4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59981 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 1.6e-55 Identity = 118/265 (44.53%), Postives = 162/265 (61.13%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9EK17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7109 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.6e-55 Identity = 121/285 (42.46%), Postives = 163/285 (57.19%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9J109 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58001 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.8e-54 Identity = 114/253 (45.06%), Postives = 157/253 (62.06%), Query Frame = 0
BLAST of Lag0023016 vs. ExPASy TrEMBL
Match: A0A2N9HDH5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37541 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.5e-53 Identity = 109/231 (47.19%), Postives = 147/231 (63.64%), Query Frame = 0
BLAST of Lag0023016 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08 Identity = 30/78 (38.46%), Postives = 39/78 (50.00%), Query Frame = 0
BLAST of Lag0023016 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases ) HSP 1 Score: 55.5 bits (132), Expect = 1.6e-07 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of Lag0023016 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 45.4 bits (106), Expect = 1.7e-04 Identity = 21/76 (27.63%), Postives = 43/76 (56.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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