Lag0022994 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022994
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr7: 42345270 .. 42346675 (-)
RNA-Seq Expression	Lag0022994
Synteny	Lag0022994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATCAAGAAGCTATGCAGAAGGTTGTGGAAGATGTTGTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAAAGGAGCAAAATCCAAGCAACGGAGCCAAGAGTTGCGATACAGAGGAAGTTCAAGATAGGAATACCGAGGAAATTGAAGAAATACAGAATGAGGATGTGCGAGAGAACATGCAGAGGTTGCGCCTGGAAAAGGTAATGAGCCAGTTCAGGAGGCTGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAGCAAAAGTGGGTCGCGTCAGGGTAGTCCGAACTGATACCCCCTCACCTCCAACTACTGATTCTGAAAGGGAAAATGCAGAGAAAGAAGAGCATGGGAAGAAGGAGGCCGAGGAAAAAGTAAGAGAAGAAACAGAGAAAAAGGTTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAACTGTTGTTGAAGCATCGGAAGAAACTGATTAGATAGATGAGCCACAATTACCGTAGGATCGCTTCATCAACAATTTTGCAAGAGCAAAATATGCTGAGCTGCTGAAAAAGACTTCCTGTTCGAGAGAGGATTTAGCGGCGATCTTCCATATTTTCTGAGGATCGGCATTACAGACCACGGCTGGGAATTGTTTTTGCAATGTCTGAGTCTGTAAACGCATAGGTGGTGCACAAATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCGTATAATGAGATCGTTGTAGCGCCATCTAATGAGCAGCTGAGCGATGTTGTGCGAGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTTTATCATACAGAGGATGCTTCCAACGACTCATGACTCGATTGTCTCGAGGGAACAGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCACATTGATGTAGGGAAGATTATTGTTAATGAGATTTCTGGTTGTTGGAAGAAGAAGATGGGGAAGCTGTTTTTTCCAATATTATTACCATGCTTTGTAAGAGAGCAGAGGTTCCAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGATCATCGACAAGTCTAACTTGGCACGGCTTCAACGTATGCAGGAGGTACGTCAGGGTGGCTTGCTACGACATCAACACGATTTTAGAACAACTGGCACTTCCGGCCAGTAGGCAAGAGTTTGTCAAGAGACAAGCTTTGACCTTCTGGAACTATGTTCAAAATTGTGATGCCAATCTGAAGAAGGCGCTACAATAG

mRNA sequence

ATGAGATCAAGAAGCTATGCAGAAGGTTGTGGAAGATGTTGTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAAAGGAGCAAAATCCAAGCAACGGAGCCAAGAGTTGCGATACAGAGGAAGTTCAAGATAGGAATACCGAGGAAATTGAAGAAATACAGAATGAGGATGTGCGAGAGAACATGCAGAGGTTGCGCCTGGAAAAGGTAATGAGCCAGTTCAGGAGGCTGAGTGGAGGTGATCATGCCGGAGAGAAAGAAGAGCATGGGAAGAAGGAGGCCGAGGAAAAAGTAAGAGAAGAAACAGAGAAAAAGGTTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAACTGTGGTGCACAAATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCGTATAATGAGATCGTTGTAGCGCCATCTAATGAGCAGCTGAGCGATGTTGTGCGAGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTTTATCATACAGAGGATGCTTCCAACGACTCATGACTCGATTGTCTCGAGGGAACAGAGAGCAGAGGTTCCAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGATCATCGACAAGTCTAACTTGGCACGGCTTCAACGTATGCAGGAGGTACGTCAGGGTGGCTTGCTACGACATCAACACGATTTTAGAACAACTGGCACTTCCGGCCAGTAGGCAAGAGTTTGTCAAGAGACAAGCTTTGACCTTCTGGAACTATGTTCAAAATTGTGATGCCAATCTGAAGAAGGCGCTACAATAG

Coding sequence (CDS)

ATGAGATCAAGAAGCTATGCAGAAGGTTGTGGAAGATGTTGTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAAAGGAGCAAAATCCAAGCAACGGAGCCAAGAGTTGCGATACAGAGGAAGTTCAAGATAGGAATACCGAGGAAATTGAAGAAATACAGAATGAGGATGTGCGAGAGAACATGCAGAGGTTGCGCCTGGAAAAGGTAATGAGCCAGTTCAGGAGGCTGAGTGGAGGTGATCATGCCGGAGAGAAAGAAGAGCATGGGAAGAAGGAGGCCGAGGAAAAAGTAAGAGAAGAAACAGAGAAAAAGGTTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAAACTGTGGTGCACAAATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCGTATAATGAGATCGTTGTAGCGCCATCTAATGAGCAGCTGAGCGATGTTGTGCGAGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTTTATCATACAGAGGATGCTTCCAACGACTCATGACTCGATTGTCTCGAGGGAACAGAGAGCAGAGGTTCCAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGATCATCGACAAGTCTAACTTGGCACGGCTTCAACGTATGCAGGAGGTACGTCAGGGTGGCTTGCTACGACATCAACACGATTTTAGAACAACTGGCACTTCCGGCCAGTAGGCAAGAGTTTGTCAAGAGACAAGCTTTGACCTTCTGGAACTATGTTCAAAATTGTGATGCCAATCTGAAGAAGGCGCTACAATAG

Protein sequence

MRSRSYAEGCGRCCATVVEEDPKEPKEQNPSNGAKSCDTEEVQDRNTEEIEEIQNEDVRENMQRLRLEKVMSQFRRLSGGDHAGEKEEHGKKEAEEKVREETEKKVEEERLLKRRAEKGKTVVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDVVREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQRAEVPENEGDVILFDKGSSTSLTWHGFNVCRRYVRVACYDINTILEQLALPASRQEFVKRQALTFWNYVQNCDANLKKALQ

Homology

[Close]

BLAST of Lag0022994 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-09
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   + VRGV+V WS  AINA++ L + P   ++E +   +  +L  V
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEPELITV 75

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V   GA W +S     T   + L   A  W  F+  R+LPTTH  IVS+++
Sbjct: 76  LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDR 128

[Close]

BLAST of Lag0022994 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-09
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEIVVAPSNEQLS 181
           +V +FY N+   D   V VRGV+V  S  AIN +Y L +    H+ + E +  P   +L+
Sbjct: 3   LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEP---ELA 62

Query: 182 DVVREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
            V+  V I GA W +S     T   + L   A  W  F+  R+LPTTH  IVS+E+
Sbjct: 63  MVLETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKER 115

[Close]

BLAST of Lag0022994 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-09
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   V VRGV+V WS  AINA++ L + P   ++E +   + + L  V
Sbjct: 86  LVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITV 145

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V   GA W +S     T   + L   A  W  F+  R+LPTTH   VS+++
Sbjct: 146 LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDR 198

[Close]

BLAST of Lag0022994 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-08
Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+       V VRGV+V WS  AINA++ L + P   ++E +   +   L  V
Sbjct: 77  LVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITV 136

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V + GA W +S     T   + L   A  W  F+   +LPTTH   VS+++
Sbjct: 137 LETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDR 189

[Close]

BLAST of Lag0022994 vs. NCBI nr
Match: EXB53755.1 (hypothetical protein L484_022412 [Morus notabilis])

HSP 1 Score: 70.5 bits (171), Expect = 3.0e-08
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   V V+ V+V ++  AIN+++ L+      Y +     ++EQL  V
Sbjct: 30  LVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVD-EYVDFASEVTDEQLEVV 89

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           + EV IEGA WQ+S     T     LKR A  W  F+  R +P+TH   V++++
Sbjct: 90  LAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDR 142

[Close]

BLAST of Lag0022994 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.7e-10
Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   + VRGV+V WS  AINA++ L + P   ++E +   +  +L  V
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEPELITV 75

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V   GA W +S     T   + L   A  W  F+  R+LPTTH  IVS+++
Sbjct: 76  LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDR 128

[Close]

BLAST of Lag0022994 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-09
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEIVVAPSNEQLS 181
           +V +FY N+   D   V VRGV+V  S  AIN +Y L +    H+ + E +  P   +L+
Sbjct: 3   LVREFYTNLTNPDDDTVYVRGVQVPLSAEAINTIYGLGDLVDEHSEFVEDITEP---ELA 62

Query: 182 DVVREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
            V+  V I GA W +S     T   + L   A  W  F+  R+LPTTH  IVS+E+
Sbjct: 63  MVLETVAIAGAEWNVSSQGVYTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKER 115

[Close]

BLAST of Lag0022994 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   V VRGV+V WS  AINA++ L + P   ++E +   + + L  V
Sbjct: 86  LVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLITV 145

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V   GA W +S     T   + L   A  W  F+  R+LPTTH   VS+++
Sbjct: 146 LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDR 198

[Close]

BLAST of Lag0022994 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-08
Identity = 39/114 (34.21%), Postives = 59/114 (51.75%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+       V VRGV+V WS  AINA++ L + P   ++E +   +   L  V
Sbjct: 77  LVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEHDLITV 136

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           +  V + GA W +S     T   + L   A  W  F+   +LPTTH   VS+++
Sbjct: 137 LETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDR 189

[Close]

BLAST of Lag0022994 vs. ExPASy TrEMBL
Match: W9QTD9 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-08
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 122 VVHKFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEIVVAPSNEQLSDV 181
           +V +FYAN+   +   V V+ V+V ++  AIN+++ L+      Y +     ++EQL  V
Sbjct: 30  LVREFYANLLDFNQETVFVQNVKVPFTARAINSIFGLEEVVD-EYVDFASEVTDEQLEVV 89

Query: 182 VREVGIEGARWQLSKTEKRTFQSAYLKREANTWMGFIIQRMLPTTHDSIVSREQ 236
           + EV IEGA WQ+S     T     LKR A  W  F+  R +P+TH   V++++
Sbjct: 90  LAEVAIEGATWQISPQGAYTCIRKELKRHAQIWYHFLTARFMPSTHGKTVAKDR 142

The following BLAST results are available for this feature:

BLAST of Lag0022994 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	1.6e-09	35.09	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON50458.1	2.7e-09	37.07	hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]	[more]
PON46472.1	3.5e-09	35.09	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	2.3e-08	34.21	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
EXB53755.1	3.0e-08	34.21	hypothetical protein L484_022412 [Morus notabilis]	[more]

BLAST of Lag0022994 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0022994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	7.7e-10	35.09	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5BNT0	1.3e-09	37.07	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5BCG4	1.7e-09	35.09	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	1.1e-08	34.21	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
W9QTD9	1.4e-08	34.21	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022412 PE=4 SV=1	[more]

BLAST of Lag0022994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..68
None	No IPR available	COILS	Coil	Coil	coord: 91..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022994.1	Lag0022994.1	mRNA