Lag0022944 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022944
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr7: 41419085 .. 41421132 (-)
RNA-Seq ExpressionLag0022944
SyntenyLag0022944
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATCTGATCAAGACCATAACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGTTTAAAAGGTGAGTGTAAAAAAAAAAATTCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTATATAAACAAAAAAAATGGTGCATGACAATACAAATTGAAGAAATTCTTTAGTACTTGGGGCAATACAACAAATTGGAGTTGTACACCGTTATAAATATGAAGCCACGAGTTGGATGAATAAAATAAGATTTCATTCCTCCAAATTAAATGTCTCACTAGCCTCAAGTTCGGTGTTTCACTCACCCTAAGTTCGTTGTTCCCGCTTTCTCCAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTTGAAGGTTCTCCGCTGTGCAGTTCCTTCTTTTTTTCTCCATTTGAAGGTTCTCTCCTTCGAGTTTCCTTCCTCAAGTTTTTCGAAGGTTCTCACCGCTTCGCTGCAGTTCCTTCTTCCAAGGTTTCACGGCTTCGCTACAGTTCCTTCTCCAATTCGAAGGTTCTCAGCCGTGCAGTTCTTCTCAGTTCAAGGTTCCCGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCCGGCTTCCTGCTCAGTTCGAGTTCAGGTTCCCTTTCCTTCCCCAATTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCAGTTTTCTCAAGTTAAGTTCCTGCTTCCTTCTCAAGTTCGAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCGTTCCTTCCTCCAATTCGAAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGCAGTTCCTTCTCTTCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCACTTCAGTTCCTTCTTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCAAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCTAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTTGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCTAA

mRNA sequence

ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGATCTGATCAAGACCATAACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGTTTAAAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTTGAAGGTTCTCCGCTGTGCAGTTCCTTCTTTTTTTCTCCATTTGAAGGTTCTCTCCTTCGAGTTTCCTTCCTCAAGTTTTTCGAAGGTTCTCACCGCTTCGCTGCAGTTCCTTCTTCCAAGGTTTCACGGCTTCGCTACAGTTCCTTCTCCAATTCGAAGGTTCTCAGCCGTGCAGTTCTTCTCAGTTCAAGGTTCCCGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCCGGCTTCCTGCTCAGTTCGAGTTCAGGTTCCCTTTCCTTCCCCAATTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCAGTTTTCTCAAGTTAAGTTCCTGCTTCCTTCTCAAGTTCGAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCGTTCCTTCCTCCAATTCGAAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGCAGTTCCTTCTCTTCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCACTTCAGTTCCTTCTTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCAAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCTAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTTGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCTAA

Coding sequence (CDS)

ATGAGTATGGCCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCAACATCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGATCTGATCAAGACCATAACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGTTTAAAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTTGAAGGTTCTCCGCTGTGCAGTTCCTTCTTTTTTTCTCCATTTGAAGGTTCTCTCCTTCGAGTTTCCTTCCTCAAGTTTTTCGAAGGTTCTCACCGCTTCGCTGCAGTTCCTTCTTCCAAGGTTTCACGGCTTCGCTACAGTTCCTTCTCCAATTCGAAGGTTCTCAGCCGTGCAGTTCTTCTCAGTTCAAGGTTCCCGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCCGGCTTCCTGCTCAGTTCGAGTTCAGGTTCCCTTTCCTTCCCCAATTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCAGTTTTCTCAAGTTAAGTTCCTGCTTCCTTCTCAAGTTCGAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGTTCTCACGTGCTTCGCTGCGTTCCTTCCTCCAATTCGAAGTTCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTTGTTGCAGTTCCTTCTCTTCAAGGTCGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCACTTCAGTTCCTTCTTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCCGCTGCTGCAGTTCATTCCTCCAAGTTCAAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCTAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCTCTCCAAGGTTGAAGGTTCTCACGCGTTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTTCAATTCCTTCTCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTGCTCCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACGTCGCTTCGCTACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCTAA

Protein sequence

MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTITKIRAFKCKSSLSQEPKLHDAPSPHEFKSSKVLTRFVAVPSKFEGSPLCSSFFFSPFEGSLLRVSFLKFFEGSHRFAAVPSSKVSRLRYSSFSNSKVLSRAVLLSSRFPFLPPSSKVLMPASCSVRVQVPFPSPIRRFSLASLQFLPQVRRFSRASSVPSSKFEGSHALRCSSFSKFEGSHALRCSSFQVRSSHVLRCSFLKLSSCFLLKFEFSRASLRSFLQVRSSHVLRCVPSSNSKFSRASLRSFLQVRRFSRALLQFLLFKVEGSHALRCSSFSPSSKVHALHFSSFFQIRRFSRASLQFLPPSLKVLRCCSSFLQVQRFSRAPLQFLPPSLKVLTSLRCSSFLQVLRFSRASLQFLLSKVEGSHALRCSSFSPSSKVHALRFNSFSQIRRFSRASLQFLPPSLKVLTCSAAVPSSKFEGSHVASLQFFPPSSKVLTCFTAVPSSKFEGSHALRCSSFL
Homology
[Close]
BLAST of Lag0022944 vs. NCBI nr
Match: KAA0065966.1 (hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-21
Identity = 70/130 (53.85%), Postives = 83/130 (63.85%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R++ +L+ 
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTITKIRAFKCKSSLSQEPKLH 120
           KLF E N D K+HS +PSRMKRK SV INTE                        +PKLH
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTE------------------------KPKLH 196

Query: 121 DAPSPHEFKS 131
            APSP E KS
Sbjct: 211 GAPSPQELKS 196

[Close]
BLAST of Lag0022944 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 115.2 bits (287), Expect = 1.9e-21
Identity = 70/133 (52.63%), Postives = 83/133 (62.41%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  +EEN+C  ST TR SAF+RLS+STSKK R ST VFDRLK+TNDQ +R+M  L+ 
Sbjct: 562 LSMATKKEENKCPTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKA 621

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTITKIRAFKCKSSLSQEPKLH 120
           K F E N D K+H+ +PSRMKRK SV IN E                        EPKLH
Sbjct: 622 KPFHEENDDNKIHNRVPSRMKRKLSVDINIE------------------------EPKLH 670

Query: 121 DAPSPHEFKSSKV 134
            APSP E KSS +
Sbjct: 682 GAPSPQELKSSTI 670

[Close]
BLAST of Lag0022944 vs. NCBI nr
Match: KAA0036008.1 (Retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 4.2e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC MST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M + + 
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0022944 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 7.2e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

[Close]
BLAST of Lag0022944 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 113.2 bits (282), Expect = 7.2e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match: A0A5A7VHY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold62G00430 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.0e-22
Identity = 70/130 (53.85%), Postives = 83/130 (63.85%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST TR SAF+RLS+STSKK R STS FDR K+TN+Q +R++ +L+ 
Sbjct: 91  LSMATKEEENQCPTSTYTRTSAFKRLSISTSKKDRPSTSAFDRPKMTNNQQQREIKSLKA 150

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTITKIRAFKCKSSLSQEPKLH 120
           KLF E N D K+HS +PSRMKRK SV INTE                        +PKLH
Sbjct: 151 KLFHEENGDDKIHSRVPSRMKRKLSVDINTE------------------------KPKLH 196

Query: 121 DAPSPHEFKS 131
            APSP E KS
Sbjct: 211 GAPSPQELKS 196

[Close]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.1e-22
Identity = 70/133 (52.63%), Postives = 83/133 (62.41%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  +EEN+C  ST TR SAF+RLS+STSKK R ST VFDRLK+TNDQ +R+M  L+ 
Sbjct: 562 LSMATKKEENKCPTSTYTRTSAFKRLSISTSKKHRPSTFVFDRLKMTNDQQQREMKTLKA 621

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTITKIRAFKCKSSLSQEPKLH 120
           K F E N D K+H+ +PSRMKRK SV IN E                        EPKLH
Sbjct: 622 KPFHEENDDNKIHNRVPSRMKRKLSVDINIE------------------------EPKLH 670

Query: 121 DAPSPHEFKSSKV 134
            APSP E KSS +
Sbjct: 682 GAPSPQELKSSTI 670

[Close]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match: A0A5A7SZJ7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18735G00010 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.0e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC MST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M + + 
Sbjct: 92  LSMATKEEENQCPMSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSFKA 151

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSL 185

[Close]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.5e-21
Identity = 63/94 (67.02%), Postives = 73/94 (77.66%), Query Frame = 0 

Query: 1   MSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSRSSTSVFDRLKVTNDQPKRKMNNLEL 60
           +SMA  EEENQC  ST  R SAF+RLS+STSKK R STS FDRLK+TNDQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSL 95
           K F E N D K+HS +PSRMKRK SV INTEGSL
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSL 244

The following BLAST results are available for this feature:
BLAST of Lag0022944 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065966.11.4e-2153.85hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa][more]
KAA0056218.11.9e-2152.63ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0036008.14.2e-2167.02Retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0044978.17.2e-2167.02retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0050734.17.2e-2167.02gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol... [more]
BLAST of Lag0022944 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VHY37.0e-2253.85Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7UM999.1e-2252.63Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7SZJ72.0e-2167.02Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BBF93.5e-2167.02Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7TQ063.5e-2167.02Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
BLAST of Lag0022944 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022944.1Lag0022944.1mRNA