Lag0022905 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022905
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr7: 40514790 .. 40516263 (+)
RNA-Seq ExpressionLag0022905
SyntenyLag0022905
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGATACACGAGAGACGATTGTGGTGCAAAAAACTGGGTCTGAGGAGGAGGAGATAGTGCAACTGTCTGTGGGGACGCCAAGTGGTGTGTCGATCCCAAAAGCTCCCAAGCAGGTTGATCCCCTATCAGTTGTTATTGAAGAAGGGGGCAGAACAAATATAAGGGGGGCTAGGGTGAATTAGGAGGAGATTGTGAAAGGGAAAAAGAAGGTGGGAGCTGATGAGGCGGAGCTCGGGGCAGTGTTCATGGGCGAGGATTTAATGGCAGTGGATTCAGTAGTGGGTGGGCAGGTTGGTGAGTCTGAGAAGATGGTGAAAGCTCACATCAGTAGGGGCTAGAAGAGGTGAGCTAGAGACATGTTATCTGACATTACGAATAAGGATCTGCATCAGGGTTCAATACACAGTAGAAGGAAGGTTGACCTCGGGGCAGTGGTCACTTAGAGTGGGAAGAAGGCGAAAGGCAGTGAGGATGGGGGCAGTCGGTGATAGAAGCTCCCCTTGGGTCGAATGATTTAGTTATTTCGGCGGTGGCTGGCTTTCAGCCTCGTCGATCACCATGAATATCTTACTGCGGAATGTGCGAGGTTTGGGGTCGACCCACACATTCCGGAGGTTGTACAAACTCATGCAACAACATCGACCTCAACTGGTGTTTCTTTCCGAAACGAAGGTACATTCGTCACGTTTTGAGCTTTTGAAATATAAGTTAGGTTTTCTGAATTGTTTTTGTGTTGACAGTGTAGGGAGAAATGGAGGGCTAACGTTGTTATGGAGCGAGGAAATTCAGTTCAGTTTAATCTCGTATTCCCCAAACCATATTGATGGCTGGGTGGGCAGTGATTTGAGGTAGTGGCGGTTTTCTGGGATTTATGGGTATCCCCAGGCAGAGATGAAGCCAATGACGTGGTCTCTACTGAAGCATTTGTGTGGGGCTCCCTTGACCCCATGGCTAGTTGGAGGAGATTTTAATGTTGTGATGTTTCATGATGAGAAGGAAGGAGGGAGGGTGAAACCTGAGTCGGAATTGATTGGTTTTCGTGAGTCTCTAAAGGCATGTGATCTGGTTGACTTGGGGTTCAGAGGGGCGACTTTTACCTGGTGCAATGGGAGACCAAGGGAGGAAACCATATGGGAGAGAATTGATAGGTGTCTTGGCAACCTAGCTTGGCAGAAGCTTTTTCTTGTCCATGAAGTGAATTGTCTGGATTTCAGTCAATCAAACCATATGCCTCTATTGCTCTCATTGTCGCAGGAGGTTAGGCTTGTCAATAATATTGGGCGTAGAATTCGAAGATTTGAAGAAACTTGGATCCATGAGCATGATTTTGAGGAGGCAGTGATAGCTAGTTGGCACCCCGCTAACCCCGTCACTTCACCTTTGATGCTGGCAACAGTGAACGAGCAGTGTTTGACATCGCTAGGCAATTGGGGTAGACCGAAATCTGGAAATTTTGCCAAACACATATGA

mRNA sequence

ATGATGGATACACGAGAGACGATTGTGGTGCAAAAAACTGGGTCTGAGGAGGAGGAGATAGTGCAACTGTCTGTGGGGACGCCAAGTGGTGTGTCGATCCCAAAAGCTCCCAAGCAGGAGGAGATTGTGAAAGGGAAAAAGAAGGTGGGAGCTGATGAGGCGGAGCTCGGGGCAGTGTTCATGGGCGAGGATTTAATGGCAGTGGATTCAGTAGTGGGTGGGCAGTTATTTCGGCGGTGGCTGGCTTTCAGCCTCGTCGATCACCATGAATATCTTACTGCGGAATGTGCGAGGTTTGGGGTCGACCCACACATTCCGGAGGTTGTACAAACTCATGCAACAACATCGACCTCAACTGGTGTTTCTTTCCGAAACGAAGAGATGAAGCCAATGACGTGGTCTCTACTGAAGCATTTGTGTGGGGCTCCCTTGACCCCATGGCTAGTTGGAGGAGATTTTAATGTTGTGATGTTTCATGATGAGAAGGAAGGAGGGAGGGTGAAACCTGAGTCGGAATTGATTGGTTTTCGTGAGTCTCTAAAGGCATGTGATCTGGTTGACTTGGGGTTCAGAGGGGCGACTTTTACCTGGTGCAATGGGAGACCAAGGGAGGAAACCATATGGGAGAGAATTGATAGGTGTCTTGGCAACCTAGCTTGGCAGAAGCTTTTTCTTGTCCATGAAGTGAATTGTCTGGATTTCAGTCAATCAAACCATATGCCTCTATTGCTCTCATTGTCGCAGGAGGTTAGGCTTGTCAATAATATTGGGCGTAGAATTCGAAGATTTGAAGAAACTTGGATCCATGAGCATGATTTTGAGGAGGCAGTGATAGCTAGTTGGCACCCCGCTAACCCCGTCACTTCACCTTTGATGCTGGCAACAGTGAACGAGCAGTGTTTGACATCGCTAGGCAATTGGGGTAGACCGAAATCTGGAAATTTTGCCAAACACATATGA

Coding sequence (CDS)

ATGATGGATACACGAGAGACGATTGTGGTGCAAAAAACTGGGTCTGAGGAGGAGGAGATAGTGCAACTGTCTGTGGGGACGCCAAGTGGTGTGTCGATCCCAAAAGCTCCCAAGCAGGAGGAGATTGTGAAAGGGAAAAAGAAGGTGGGAGCTGATGAGGCGGAGCTCGGGGCAGTGTTCATGGGCGAGGATTTAATGGCAGTGGATTCAGTAGTGGGTGGGCAGTTATTTCGGCGGTGGCTGGCTTTCAGCCTCGTCGATCACCATGAATATCTTACTGCGGAATGTGCGAGGTTTGGGGTCGACCCACACATTCCGGAGGTTGTACAAACTCATGCAACAACATCGACCTCAACTGGTGTTTCTTTCCGAAACGAAGAGATGAAGCCAATGACGTGGTCTCTACTGAAGCATTTGTGTGGGGCTCCCTTGACCCCATGGCTAGTTGGAGGAGATTTTAATGTTGTGATGTTTCATGATGAGAAGGAAGGAGGGAGGGTGAAACCTGAGTCGGAATTGATTGGTTTTCGTGAGTCTCTAAAGGCATGTGATCTGGTTGACTTGGGGTTCAGAGGGGCGACTTTTACCTGGTGCAATGGGAGACCAAGGGAGGAAACCATATGGGAGAGAATTGATAGGTGTCTTGGCAACCTAGCTTGGCAGAAGCTTTTTCTTGTCCATGAAGTGAATTGTCTGGATTTCAGTCAATCAAACCATATGCCTCTATTGCTCTCATTGTCGCAGGAGGTTAGGCTTGTCAATAATATTGGGCGTAGAATTCGAAGATTTGAAGAAACTTGGATCCATGAGCATGATTTTGAGGAGGCAGTGATAGCTAGTTGGCACCCCGCTAACCCCGTCACTTCACCTTTGATGCTGGCAACAGTGAACGAGCAGTGTTTGACATCGCTAGGCAATTGGGGTAGACCGAAATCTGGAAATTTTGCCAAACACATATGA

Protein sequence

MMDTRETIVVQKTGSEEEEIVQLSVGTPSGVSIPKAPKQEEIVKGKKKVGADEAELGAVFMGEDLMAVDSVVGGQLFRRWLAFSLVDHHEYLTAECARFGVDPHIPEVVQTHATTSTSTGVSFRNEEMKPMTWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFRGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVRLVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPKSGNFAKHI
Homology
BLAST of Lag0022905 vs. NCBI nr
Match: XP_042962369.1 (uncharacterized protein LOC122296631 [Carya illinoinensis])

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-29
Identity = 68/188 (36.17%), Postives = 99/188 (52.66%), Query Frame = 0

Query: 132 TWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFR 191
           +WSLL  L   P   W++ GDFN +M + EK GGR KPE +L  FR+ ++ C + D+GFR
Sbjct: 77  SWSLLTSLKVHPDIGWIILGDFNEIMSNVEKSGGRAKPERQLQAFRDVVEECQVHDMGFR 136

Query: 192 GATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVR 251
           G+ FTWCNGR   +TI ER+DRC  NL W   + +  V     + S+H P++L LS EV+
Sbjct: 137 GSPFTWCNGREEGQTISERLDRCFSNLKWHSYYPMAVVIHGIVAYSDHKPIILKLSDEVQ 196

Query: 252 LVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPK 311
                 R++  FE  WI +   ++ +  +W           +    E C   L  W R  
Sbjct: 197 --EGPRRKLFHFEAMWIEDSGCKQVIDGAWKAVEGRKELSTVMKKIEYCSEKLSLWNRAS 256

Query: 312 SGNFAKHI 320
            GN  + +
Sbjct: 257 FGNVQRSL 262

BLAST of Lag0022905 vs. NCBI nr
Match: XP_042988712.1 (uncharacterized protein LOC122316247 [Carya illinoinensis])

HSP 1 Score: 138.7 bits (348), Expect = 9.0e-29
Identity = 72/193 (37.31%), Postives = 97/193 (50.26%), Query Frame = 0

Query: 127 EMKPMTWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLV 186
           E++  TW+ ++ L G    PWLV GDFN V+   EK GGR +PE ++  FR+ L  C  V
Sbjct: 113 ELRQETWNTIRSLRGTVSVPWLVCGDFNEVLCWQEKRGGRNRPERQMRTFRQLLDDCSFV 172

Query: 187 DLGFRGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSL 246
           DLGF G  FTWCN R  + T+ ER+DR L N  W   F    V     + S+H+P+LL  
Sbjct: 173 DLGFMGPPFTWCNKRDVQHTVSERLDRYLANQGWIDWFPGFRVVHGSSASSDHLPILLYS 232

Query: 247 SQEVRLVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGN 306
            +E     N   ++ RFE  W  E ++E  V  SW+          + T    C   L  
Sbjct: 233 RREKSSKRN---KLFRFEAMWTEEGEYENIVEDSWNGRTSGNQMNNIKTRIGACSQRLAQ 292

Query: 307 WGRPKSGNFAKHI 320
           W + K GN  K I
Sbjct: 293 WNKTKYGNVQKRI 302

BLAST of Lag0022905 vs. NCBI nr
Match: XP_030941843.1 (uncharacterized protein LOC115966834 [Quercus lobata])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-28
Identity = 74/200 (37.00%), Postives = 109/200 (54.50%), Query Frame = 0

Query: 122 SFRNEEMKPMTWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLK 181
           S+  E  K  +W LLKHL      PWL  GDFN +   +EK+G  +K +  ++ FR +L 
Sbjct: 107 SWLEESRKKESWQLLKHLHTRLSVPWLCCGDFNEISNSNEKQGRLLKQQQPMMEFRSTLL 166

Query: 182 ACDLVDLGFRGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMP 241
              LVD+GF+G  FTW NGR  EE + ER+DR    L W+ +F   +V  L  + S+H+P
Sbjct: 167 HYGLVDMGFQGNIFTWNNGRLGEEFVQERLDRACATLEWRTMFPHAKVTHLQSTYSDHIP 226

Query: 242 LLLSLSQEVRLVNNIGRRI-RRFEETWIHEHDFEEAVIASWHPANPVTSPL-MLATVNEQ 301
           +L++LS+  +      ++I R FEE W+H+  +EE + ASW       SP+  L    ++
Sbjct: 227 ILINLSRPNQQCRK--KKIPRSFEEKWVHQPGYEEVIRASWESNIGGRSPMYRLFEKIKK 286

Query: 302 CLTSLGNWGRPKSGNFAKHI 320
           C  +L  W     GNF   I
Sbjct: 287 CRQALVTWSSTTFGNFKTQI 304

BLAST of Lag0022905 vs. NCBI nr
Match: XP_030970107.1 (uncharacterized protein LOC115990412 [Quercus lobata])

HSP 1 Score: 134.8 bits (338), Expect = 1.3e-27
Identity = 71/191 (37.17%), Postives = 104/191 (54.45%), Query Frame = 0

Query: 126 EEMKPMTWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDL 185
           E+ K  +W LLKHL    L PWL  GDFN ++  +EK+G   +P   +  FRE+L  C L
Sbjct: 96  EQQKRESWQLLKHLHSRSLYPWLCCGDFNEILCMEEKQGRIPRPLRLMQDFREALLFCGL 155

Query: 186 VDLGFRGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLS 245
            +LGF+G  FTW +GR  E+ + ER+D    N  W+ +F   +V+ L  S S+H+PLL+S
Sbjct: 156 ANLGFKGNIFTWDSGRLGEDLVQERLDGAYANCEWRAIFPHAKVSHLQVSYSDHVPLLIS 215

Query: 246 LSQEVRLVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPL-MLATVNEQCLTSL 305
            ++ +  +    R  R FEE W    D E  +  +W       SP+ +L    +QC  +L
Sbjct: 216 TTELIN-IRRRKRLPRHFEEKWATHPDCERVICEAWGGQIRNGSPMFVLFEKIKQCRHAL 275

Query: 306 GNWGRPKSGNF 316
            +W R   GNF
Sbjct: 276 VDWSRNNFGNF 285

BLAST of Lag0022905 vs. NCBI nr
Match: XP_018859783.1 (uncharacterized protein LOC109021580 [Juglans regia] >KAF5468190.1 hypothetical protein F2P56_012365 [Juglans regia])

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-27
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 132 TWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGF- 191
           TW LL HLC     PWL+ GDFN ++  +EK GG  + E  +  FR +L  C+L DLGF 
Sbjct: 76  TWGLLHHLCRLTSCPWLLMGDFNEILEPNEKRGGNRRSEGLMEHFRAALIDCNLQDLGFS 135

Query: 192 RGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEV 251
           RG  FTWCNGR  E  IWER+DRCL +  W + F   +V+    S S+H+P+ L+     
Sbjct: 136 RGPYFTWCNGREGEGCIWERLDRCLASPDWVEAFPNFQVSHGSVSYSDHLPIWLNTEG-- 195

Query: 252 RLVNNIGRRIR--RFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVN--EQCLTSLGN 311
             V+   RR +  RFE  W+   + E  +   W   N      M+AT+   ++C + L N
Sbjct: 196 --VSQYDRRKKMFRFESMWVGHEECEAIIKDVWQ--NEEGRGNMVATMRRVKECNSKLDN 255

Query: 312 WGRPKSGNFAKHI 320
           W R + G   K++
Sbjct: 256 WNRTRFGLVHKNL 262

BLAST of Lag0022905 vs. ExPASy TrEMBL
Match: A0A2N9EDY7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS752 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-33
Identity = 75/188 (39.89%), Postives = 105/188 (55.85%), Query Frame = 0

Query: 132 TWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFR 191
           TW+LL+ L    L PW   GDFN ++  +E  G   +P+ ++ GFR++L  CDL+DLGFR
Sbjct: 507 TWNLLRRLNQQFLLPWCCMGDFNEIIKAEEMHGRNRRPDRQMQGFRDALDECDLMDLGFR 566

Query: 192 GATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVR 251
           G+ FTWCN R    T W R+DR + NL W + F    V  LD   S+H  LLL+   E R
Sbjct: 567 GSPFTWCNNRDPPATTWVRLDRGVANLNWMQKFSEAVVEHLDVLNSDHKCLLLTC--EPR 626

Query: 252 LVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPK 311
            VN   R+  RFEE W  +   EE + A+W  A P ++   +A   + C   LG+W R K
Sbjct: 627 NVNCFQRKPFRFEEVWTSDAGCEETIQAAWDSAVPGSAMFRVAEKLKTCRRQLGDWSRKK 686

Query: 312 SGNFAKHI 320
            G+  + +
Sbjct: 687 FGSITRQL 692

BLAST of Lag0022905 vs. ExPASy TrEMBL
Match: A0A2N9ES30 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5362 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 5.5e-32
Identity = 73/188 (38.83%), Postives = 104/188 (55.32%), Query Frame = 0

Query: 132 TWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFR 191
           TW+LL+ L    L PW   GDFN ++  +E  G   +P+ ++ GFR++L  CDL+DLGFR
Sbjct: 468 TWNLLRRLNQQFLLPWCCMGDFNEIIKAEEMHGRNRRPDRQMQGFRDALDECDLMDLGFR 527

Query: 192 GATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVR 251
           G+ FTWCN R    T W R+DR + NL W + F    V  LD   S+H  LLL+   E R
Sbjct: 528 GSPFTWCNNRDPPATTWVRLDRGVANLNWMQKFPEAVVEHLDVINSDHKCLLLTC--EPR 587

Query: 252 LVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPK 311
            VN   R+  RFE+ W  +   EE + A+W    P ++   +A   + C   LG+W R K
Sbjct: 588 NVNCFQRKPFRFEKVWTSDAGCEETIQAAWDSVVPGSAMFRVAEKLKTCRRQLGDWSRKK 647

Query: 312 SGNFAKHI 320
            G+  + +
Sbjct: 648 FGSITRQL 653

BLAST of Lag0022905 vs. ExPASy TrEMBL
Match: A0A2N9GYK3 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32597 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-32
Identity = 80/234 (34.19%), Postives = 118/234 (50.43%), Query Frame = 0

Query: 88  HHEYLTAECARFGVDPHIPEVVQTHATTS-TSTGVSFRNE-EMKPMTWSLLKHLCGAPLT 147
           H EYL     +     HI  +++  +  +   TG+    E + +  TW+LL+HL      
Sbjct: 474 HEEYLEKVTIKSYSSSHIDAIIKEGSEDAWRLTGIYGAPEAQRREETWALLRHLDSKFQL 533

Query: 148 PWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFRGATFTWCNGRPREE 207
           PW   GDFN ++  +E +G   +P+ ++ GFR +L  C LVDL +RG  FTWCN R    
Sbjct: 534 PWCCIGDFNEILKLEEMKGRFARPDRQMRGFRSALDDCGLVDLRYRGFPFTWCNNRDPPF 593

Query: 208 TIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVRLVNNIGRRIRRFEE 267
           T W R+DR + N+ W   F + +V  +D S+S+H  L LS    V  V    RR  RFEE
Sbjct: 594 TTWVRLDRAVANMEWLHRFPMAQVEHIDVSKSDHKCLWLSCLPPV--VTRSKRRPFRFEE 653

Query: 268 TWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPKSGNFAKHI 320
            W+ +   EE ++ +W  + P T    +    ++C   LG W R   GN  K I
Sbjct: 654 IWMTDGGCEETIMKAWEMSKPGTRMFKVWHKLKECKKQLGEWSRKSFGNIKKQI 705

BLAST of Lag0022905 vs. ExPASy TrEMBL
Match: A0A2N9EK22 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2801 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.1e-31
Identity = 79/234 (33.76%), Postives = 117/234 (50.00%), Query Frame = 0

Query: 88  HHEYLTAECARFGVDPHIPEVVQTHATTS-TSTGVSFRNE-EMKPMTWSLLKHLCGAPLT 147
           H EYL     +     HI  +++  +  +   TG+    E + +  TW+LL+HL      
Sbjct: 414 HEEYLEKVTIKSYSSSHIDAIIKEGSEDAWRLTGIYGALEAQRREETWALLRHLDSRFQL 473

Query: 148 PWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDLGFRGATFTWCNGRPREE 207
           PW   GDFN ++  +E +G   +P+ ++ GFR +L  C LVDL +RG  FTWCN R    
Sbjct: 474 PWCCIGDFNEILKLEEMKGRFARPDRQMRGFRSALDDCGLVDLRYRGFPFTWCNNRDPPF 533

Query: 208 TIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQEVRLVNNIGRRIRRFEE 267
           T W R+DR + N+ W   F + +V  +D S+S+H  L LS    V  +    RR  RFEE
Sbjct: 534 TTWVRLDRAVANMEWLHRFPMAQVEHIDVSKSDHKCLWLSCLPPV--ITRSKRRPFRFEE 593

Query: 268 TWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWGRPKSGNFAKHI 320
            W+ +   EE +  +W  + P T    +    ++C   LG W R   GN  K I
Sbjct: 594 IWMTDGGCEETITKAWEMSKPGTRMFKVWHKLKECKKQLGEWSRKSFGNIKKQI 645

BLAST of Lag0022905 vs. ExPASy TrEMBL
Match: A0A2N9I921 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS48455 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-30
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 0

Query: 129 KPMTWSLLKHLCGAPLTPWLVGGDFNVVMFHDEKEGGRVKPESELIGFRESLKACDLVDL 188
           + ++W+LL++L G    PW  GGDFN ++  +EK+G   KPES+++ FRE+L  C  VDL
Sbjct: 608 RELSWNLLRYLHGQFDLPWCCGGDFNEIVRLEEKQGQISKPESQMLSFREALDDCGFVDL 667

Query: 189 GFRGATFTWCNGRPREETIWERIDRCLGNLAWQKLFLVHEVNCLDFSQSNHMPLLLSLSQ 248
           G+ GA FTWCN R    T+WER+DR + + AW   F    V  LD++ S+H PL LS   
Sbjct: 668 GYIGAPFTWCNNRFSGATVWERLDRVVASTAWLSRFPQARVYHLDYTGSDHKPLWLS--- 727

Query: 249 EVRLVNNIGRRIRRFEETWIHEHDFEEAVIASWHPANPVTSPLMLATVNEQCLTSLGNWG 308
                N    +  RFEE W+ +    E +  +W   +   S   + T    C   L NW 
Sbjct: 728 PTHARNRPVAKPFRFEEMWMTDSGCAETISTAWQSPSNGNSMYQVITKLNHCRNQLKNWS 787

Query: 309 RPKSGNFAKHI 320
           +   G+  K +
Sbjct: 788 KSHFGSVRKQL 795

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042962369.13.1e-2936.17uncharacterized protein LOC122296631 [Carya illinoinensis][more]
XP_042988712.19.0e-2937.31uncharacterized protein LOC122316247 [Carya illinoinensis][more]
XP_030941843.11.5e-2837.00uncharacterized protein LOC115966834 [Quercus lobata][more]
XP_030970107.11.3e-2737.17uncharacterized protein LOC115990412 [Quercus lobata][more]
XP_018859783.12.2e-2738.34uncharacterized protein LOC109021580 [Juglans regia] >KAF5468190.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9EDY75.0e-3339.89Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9ES305.5e-3238.83Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9GYK37.2e-3234.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS32597 PE=4 SV=1[more]
A0A2N9EK222.1e-3133.76Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2801 PE=4 SV=1[more]
A0A2N9I9211.0e-3036.65Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..319
NoneNo IPR availablePANTHERPTHR33710:SF35SUBFAMILY NOT NAMEDcoord: 127..282
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 127..282
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 76..246
e-value: 2.9E-14
score: 55.4
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 89..246

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022905.1Lag0022905.1mRNA