Lag0022893 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGCATCGAGACCACATCCGAATGAGAGGGATCCTGAGGACATGAAAGTATGGTCAAGATAAGCTTAAAAGAATTGATAGATACTAGCTATACTAACAAGGTGCACCTTCCTTTTCGGTGGCTCAATCATAGAAACTTTGAAGTTAAGCGTGCTTGGCTTGGAGAAGTTCTATGTTGGGTGACCTCCTAGGAATTTTCCTAGGAAGCATTTGAGTGAGGACAAAACATGCTAAAAAGACCCCGTGTTGGTTTGTGGGGATAGTCTTCACTCTTGGAAGTAGTTTAAGACGAGTATGGCAACGTGGTCAGGTCGCAGGGGAATGTCGAGGCCTTAGGTGCCGAATCCGGATTCCAAATCCTGAGCCTGGGGCATTACATTAACACCTTGCATAGCTCTCCTACTTGAATGTATACTTAATTAAGTACTAACGCACAAAAGTTTATAACATTGTAACTTATTTAACTTACCACATCATAAATCTAGCTTAATTTCTAACCATTAGTAACTACAACCAAGTTCTAAATGTGGATTTAGAATTATTTTGGATATACTTTGCTTGAATTACTCGTAAAAGTGTTTGGTGGGTTGGGTTCTTTTTCTTTATTAGTCTTATGTTTCTTTTTTGGATAATATTGTTCGTGTACGTGTTTTTGAAGATTGGGTTTGCTTTCATGTAGCAGTCAGTTTTTGTTTTTTAAAAAAAAAGGGGGGCAGGGAAGTTGGCTTTTCAGCCGGTCAAAGAGGAGGGAAAGGGGGGGGGGCGTTTCCTCCCAAATTCGGTCAATTGACCATTTAAAAAAAAAAATCGGAACTCTCTCTCCCACAGCCCTCTCTCTCTCCCCAATACCCTCTCTCTCTCCTTCTCGGTTCTCTCTCTATCTCAGCCCCTCTCTCGCTCCCTCTCGGCCTTGTCTCCCTCCGCCGCACGCCGACCGTCAACGTCGCCGCAGCTCGATGCCGTCGCGCCTCCACCGTCGCCGCTCGCCGACTGTAAGTTCTCTCTCTCTCTTCCGTTTTTTCTTGTCTCTCCCTCCCGTTTCCGTCTCCCTCTCTCTAACCCTGTTCGCTCTCTCTCTCCCGCGCCGCTGTCATGCCATCGTCGCCTCTGTCCCTATGGCACTTATGCTTTCCAGTGTATGCCATTTGGACTGTGTAATGCTCCAGCTACCTTTCAACGTTGTATGATGGCCATATTTTCAGACCTTGTAGAAGAGATTATGGAAGTTTTTATGGATGATTTTTCTGTTTTCGGTTCATCATTCGATAACTGTTTGCATAATCTCTCTCGTGTTTTGCAAAGATGCGAAGAAACTAACATGGTTTTAAATTGGGAAAAATGTCATTTTATGGTAAAAGAAGGGATAGTTTTAGATACATTGTATGGTAGCTGCATATGGTAAGAAATTTGCTGCATTGGAATGAAATGTTTATGTTTTGAAATGACTGCTTACTCCTGACATGAGAATGTGTATATGTTGTTCGGATTGAGGCTGAGGTGATGTGTTGCGTTAATTTCGAGAATATGGCTACTGCATATATGTGTTGTGTGATAGAAGCGAATGCGTGTCTGATGTATATTTTGTGGCTGGTTGGCATTGTTGTGGACGACGGGGAGTTTGTGTTTTTCTCTATTTAGGAGGGTTGCAGTAAAAAAAATAGCAAGAGTTAAGGGGTCCTAAAGGGAAAAGGATTAAGAAAGAGAAAGGAATAGGCTAGTGCCTTAGAAGAGGGTCATGTCAATTAAATACCTAGGACTGAGATGTATTAGACTGAAATAAGGGGCTAATTAATGGGCGGGACTTGGCTTCGCAAACTAGGTGCCATTTACTATTTGGGTCACAAGTTTCAAAGCTTTTCAATGTCTGCCTCAAATCCTCTCTCAGGAAAAATTCGTCAATGCTGCCGCCAAGAAAAAGTGTGAAGACATGCTCCAAAGAGATCCTCTTCCTGAGAGAGGATTTGAGGCAAACATTGAAAAGCTCCCCTCGTTTGTTTCAGGAGTGATCATCAAGCTTGGTTGGGAAATACTTTGTCAAAAGCCAGAGCCGGTTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAACGTTCAAGACAATGAGCTGTTCCAAACCAAGGTAAGGGGAAAATGGATAGATTGGTCACCATCAGCTATCAATGAGTTTTACAACCTTCATAATTTCCCCCATGCGGTTTTCAACTCTATGGAGATTGCTCCATCTAAAGAGCAGTTCCAATCAGCTCTAGTAACATGCACAGTTGAAGGAACAAGCTGGAAAATGACAAGGAACTCCATTCGAACACTGTTGGCAGCGTACCTAAAGCCCGAAGCAAATGTAGTGCATACCTTTGCGAGGAGTAGGTTGCTCCCCACCACTCATGACACCACTGTGTCTAATGAAAGAGTTCTCTTAGTTTTTTCCATCTTGATGATTCTGAGCATTGACGTGGGGAGGCTCTTGGCAAAGGAGATTTTGGCTTGTTCAAAAAGGAAGGTAGGAAGGTTGTTTTTCCCAAATCTTATTACAGCTTTATGTTTGAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAAATTTTAATGGACAAGGGGATAATAGACTTAGCATCTATAGCAAGATTGTATGGGGAGAGTAAAGGGAGGTCAAGAACAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAGAATGATGAGGCGAATGGAACACAGTGAGAATCAGCAAAAGGCCTACTGGCAATACGCTCATCACAGAGACTCTGCCATGGAAAAAACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCATCAGGTTTATTTGACCCGTGGTGCCCTTCCCCATCTCCAAGTGGGAATGAAAATGATGTTGATGATGATGCTGATCAAGAAGATTGA ATGAATGCATCGAGACCACATCCGAATGAGAGGGATCCTGAGGACATGAAACCCCTCTCTCGCTCCCTCTCGGCCTTGTCTCCCTCCGCCGCACGCCGACCGTCAACGTCGCCGCAGCTCGATGCCGTCGCGCCTCCACCGTCGCCGCTCGCCGACTGTAAGTTCTCTCTCTCTCTTCCGTTTTTTCTTGTCTCTCCCTCCCGTTTCCGTCTCCCTCTCTCTAACCCTGTTCGCTCTCTCTCTCCCGCGCCGCTGTCATGCCATCGTCGCCTCTGTCCCTATGGCACTTATGCTTTCCAGTGTATGCCATTTGGACTGTGTAATGCTCCAGCTACCTTTCAACGTTGTATGATGGCCATATTTTCAGACCTTGTAGAAGAGATTATGGAAGTTTTTATGGATGATTTTTCTGTTTTCGGTTCATCATTCGATAACTGTTTGCATAATCTCTCTCGTGTTTTGCAAAGATGCGAAGAAACTAACATGGTTTTAAATTGGGAAAAATGTCATTTTATGGAAAAATTCGTCAATGCTGCCGCCAAGAAAAAGTGTGAAGACATGCTCCAAAGAGATCCTCTTCCTGAGAGAGGATTTGAGGCAAACATTGAAAAGCTCCCCTCGTTTGTTTCAGGAGTGATCATCAAGCTTGGTTGGGAAATACTTTGTCAAAAGCCAGAGCCGGTTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAACGTTCAAGACAATGAGCTGTTCCAAACCAAGGTAAGGGGAAAATGGATAGATTGGTCACCATCAGCTATCAATGAGTTTTACAACCTTCATAATTTCCCCCATGCGGTTTTCAACTCTATGGAGATTGCTCCATCTAAAGAGCAGTTCCAATCAGCTCTAGTAACATGCACAGTTGAAGGAACAAGCTGGAAAATGACAAGGAACTCCATTCGAACACTGTTGGCAGCGTACCTAAAGCCCGAAGCAAATGTAGTGCATACCTTTGCGAGGAGTAGGTTGCTCCCCACCACTCATGACACCACTGTGTCTAATGAAAGAGTTCTCTTAGTTTTTTCCATCTTGATGATTCTGAGCATTGACGTGGGGAGGCTCTTGGCAAAGGAGATTTTGGCTTGTTCAAAAAGGAAGGTAGGAAGGTTGTTTTTCCCAAATCTTATTACAGCTTTATGTTTGAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAAATTTTAATGGACAAGGGGATAATAGACTTAGCATCTATAGCAAGATTGTATGGGGAGAGTAAAGGGAGGTCAAGAACAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAGAATGATGAGGCGAATGGAACACAGTGAGAATCAGCAAAAGGCCTACTGGCAATACGCTCATCACAGAGACTCTGCCATGGAAAAAACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCATCAGGTTTATTTGACCCGTGGTGCCCTTCCCCATCTCCAAGTGGGAATGAAAATGATGTTGATGATGATGCTGATCAAGAAGATTGA ATGAATGCATCGAGACCACATCCGAATGAGAGGGATCCTGAGGACATGAAACCCCTCTCTCGCTCCCTCTCGGCCTTGTCTCCCTCCGCCGCACGCCGACCGTCAACGTCGCCGCAGCTCGATGCCGTCGCGCCTCCACCGTCGCCGCTCGCCGACTGTAAGTTCTCTCTCTCTCTTCCGTTTTTTCTTGTCTCTCCCTCCCGTTTCCGTCTCCCTCTCTCTAACCCTGTTCGCTCTCTCTCTCCCGCGCCGCTGTCATGCCATCGTCGCCTCTGTCCCTATGGCACTTATGCTTTCCAGTGTATGCCATTTGGACTGTGTAATGCTCCAGCTACCTTTCAACGTTGTATGATGGCCATATTTTCAGACCTTGTAGAAGAGATTATGGAAGTTTTTATGGATGATTTTTCTGTTTTCGGTTCATCATTCGATAACTGTTTGCATAATCTCTCTCGTGTTTTGCAAAGATGCGAAGAAACTAACATGGTTTTAAATTGGGAAAAATGTCATTTTATGGAAAAATTCGTCAATGCTGCCGCCAAGAAAAAGTGTGAAGACATGCTCCAAAGAGATCCTCTTCCTGAGAGAGGATTTGAGGCAAACATTGAAAAGCTCCCCTCGTTTGTTTCAGGAGTGATCATCAAGCTTGGTTGGGAAATACTTTGTCAAAAGCCAGAGCCGGTTGTTGTTCCCTTGGTAAGGGAATTTTATGCTAACGTTCAAGACAATGAGCTGTTCCAAACCAAGGTAAGGGGAAAATGGATAGATTGGTCACCATCAGCTATCAATGAGTTTTACAACCTTCATAATTTCCCCCATGCGGTTTTCAACTCTATGGAGATTGCTCCATCTAAAGAGCAGTTCCAATCAGCTCTAGTAACATGCACAGTTGAAGGAACAAGCTGGAAAATGACAAGGAACTCCATTCGAACACTGTTGGCAGCGTACCTAAAGCCCGAAGCAAATGTAGTGCATACCTTTGCGAGGAGTAGGTTGCTCCCCACCACTCATGACACCACTGTGTCTAATGAAAGAGTTCTCTTAGTTTTTTCCATCTTGATGATTCTGAGCATTGACGTGGGGAGGCTCTTGGCAAAGGAGATTTTGGCTTGTTCAAAAAGGAAGGTAGGAAGGTTGTTTTTCCCAAATCTTATTACAGCTTTATGTTTGAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAAATTTTAATGGACAAGGGGATAATAGACTTAGCATCTATAGCAAGATTGTATGGGGAGAGTAAAGGGAGGTCAAGAACAAATATGGTTTGTGGGGTTGAGGAGATTTTGAGGCAGCAGAGAAGAATGATGAGGCGAATGGAACACAGTGAGAATCAGCAAAAGGCCTACTGGCAATACGCTCATCACAGAGACTCTGCCATGGAAAAAACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCATCAGGTTTATTTGACCCGTGGTGCCCTTCCCCATCTCCAAGTGGGAATGAAAATGATGTTGATGATGATGCTGATCAAGAAGATTGA MNASRPHPNERDPEDMKPLSRSLSALSPSAARRPSTSPQLDAVAPPPSPLADCKFSLSLPFFLVSPSRFRLPLSNPVRSLSPAPLSCHRRLCPYGTYAFQCMPFGLCNAPATFQRCMMAIFSDLVEEIMEVFMDDFSVFGSSFDNCLHNLSRVLQRCEETNMVLNWEKCHFMEKFVNAAAKKKCEDMLQRDPLPERGFEANIEKLPSFVSGVIIKLGWEILCQKPEPVVVPLVREFYANVQDNELFQTKVRGKWIDWSPSAINEFYNLHNFPHAVFNSMEIAPSKEQFQSALVTCTVEGTSWKMTRNSIRTLLAAYLKPEANVVHTFARSRLLPTTHDTTVSNERVLLVFSILMILSIDVGRLLAKEILACSKRKVGRLFFPNLITALCLKAQVQVDEDEEILMDKGIIDLASIARLYGESKGRSRTNMVCGVEEILRQQRRMMRRMEHSENQQKAYWQYAHHRDSAMEKTFEYGFEELPQPFPQFPSGLFDPWCPSPSPSGNENDVDDDADQED Homology
BLAST of Lag0022893 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 182.6 bits (462), Expect = 8.8e-42 Identity = 125/349 (35.82%), Postives = 180/349 (51.58%), Query Frame = 0
BLAST of Lag0022893 vs. NCBI nr
Match: XP_038981146.1 (uncharacterized protein LOC120110396 [Phoenix dactylifera]) HSP 1 Score: 168.7 bits (426), Expect = 1.3e-37 Identity = 90/158 (56.96%), Postives = 105/158 (66.46%), Query Frame = 0
BLAST of Lag0022893 vs. NCBI nr
Match: XP_038972405.1 (uncharacterized protein LOC120104748 [Phoenix dactylifera]) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-36 Identity = 90/147 (61.22%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Lag0022893 vs. NCBI nr
Match: XP_038973683.1 (uncharacterized protein LOC120105384 [Phoenix dactylifera]) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-36 Identity = 90/147 (61.22%), Postives = 102/147 (69.39%), Query Frame = 0
BLAST of Lag0022893 vs. NCBI nr
Match: XP_038976300.1 (uncharacterized protein LOC120107204 [Phoenix dactylifera]) HSP 1 Score: 164.9 bits (416), Expect = 1.9e-36 Identity = 89/158 (56.33%), Postives = 103/158 (65.19%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 4.9e-11 Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 8.3e-11 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.1e-10 Identity = 44/155 (28.39%), Postives = 71/155 (45.81%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 4.6e-09 Identity = 40/110 (36.36%), Postives = 54/110 (49.09%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 62.0 bits (149), Expect = 2.3e-08 Identity = 31/79 (39.24%), Postives = 45/79 (56.96%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 4.3e-42 Identity = 125/349 (35.82%), Postives = 180/349 (51.58%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy TrEMBL
Match: A0A6P6X9H2 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113741122 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.8e-36 Identity = 82/134 (61.19%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy TrEMBL
Match: A0A6P6TF62 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113700883 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 7.8e-36 Identity = 82/134 (61.19%), Postives = 97/134 (72.39%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy TrEMBL
Match: A0A6P6XBM5 (uncharacterized protein LOC113740969 OS=Coffea arabica OX=13443 GN=LOC113740969 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-35 Identity = 82/134 (61.19%), Postives = 96/134 (71.64%), Query Frame = 0
BLAST of Lag0022893 vs. ExPASy TrEMBL
Match: A0A6P6SU28 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113694771 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-35 Identity = 82/134 (61.19%), Postives = 96/134 (71.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|