Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGGTAAGAGATTCAGAGAGTGTAACTAGTCGGATGCCCATCCAGGACCGACCGAAAGGAAGCTAGACCTAGCCACAAAAAGGTCCTCAGGAATTTGCTGTCGAAATCGGCACCAAGTATACACCACTAACCGTTCCACTTGAACAGGTCTAGCTGCAATACAAAAACATCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACAGGAACACATATCGCATGTTCACGAAGACCACGACCATACTACTGGAGTGTATACAGTTAAGGATGAAATAGAAACCCTAATCCAGGAAGGCTACCTTAAGGAATTTGTGGGAATGACAGAGGTAAAAGACCATTACAACAGATTAAGGTAAATGGCAACAACCGCCGCTCGAGATACGAACAATTTTAGGAGGACCATCGGACGGAGAATCAAGTAGAAAATGAAAGTCGCAGTTCGAGAGCACAACTAGAACCAGGAGAGCAAGGTATGTACTCGCTTCTACTTGATGAAAACTAACTCAATTTAGAGTTTACAGAGAAAGAATATGTTGGGTACACCATCCGCACAATGACGCGTAGGTAGTAGCCTAACGGCTGCCAACGTAAAAGTTCACCGAATCCTTATCGACGGAGGAAGTTCTGCTGATGTTCTCTCAATTGCTGTGTATGATGCAATGAAGCTAGGAAGGGATCGCCTAAGGTCGTGCCTCACACCATTGGTGGGTTTCGGTGGAGAAAAGGTGAGTCCATAGGGAGCATCGAGCTACCGGTGACCTTTGGTGGACAACAGTCGATCATAAGGTTAGTCAACTTTCTGGTAGTGGACTGCGTGCCAGCGTACAATGCTATTTTAGGACGACCAAACTTGCACGGCTCAAAGTGGTGCCTCTACTTATCACCAAGTTTTGAAGTTTCCAACTAAAGAAGGTGTAGGAGTGGTGCATGGCGAGCAGAAGATGTCAAGAGAGTGCTACTTCATGGCACTCAAACATATGGATAGGAAGGCTCAAACAGTGCCCACCTCGGGAAATAGCCGAGGCCGAGAATTTGAAGGATCAGATCATCCTCTTCCAATGGAATACTTGTTGGGTTTTATGCCCTAA
mRNA sequence
ATGAGGAGGTCTAGCTGCAATACAAAAACATCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACAGGAACACATATCGCATGTTCACGAAGACCACGACCATACTACTGGAGTGTATACAGTTAAGGATGAAATAGAAACCCTAATCCAGGAAGGCTACCTTAAGGAATTTGTGGGAATGACAGAGGAGGACCATCGGACGGAGAATCAAGTAGAAAATGAAAGTCGCAGTTCGAGAGCACAACTAGAACCAGGAGAGCAAGGTAGTAGCCTAACGGCTGCCAACGTAAAAGTTCACCGAATCCTTATCGACGGAGGAAGTTCTGCTGATGTTCTCTCAATTGCTGTGTATGATGCAATGAAGCTAGGAAGGGATCGCCTAAGGTCGTGCCTCACACCATTGGTGGGTTTCGGTGGAGAAAAGGACGACCAAACTTGCACGGCTCAAAGTGGTGCCTCTACTTATCACCAAGTTTTGAAGTTTCCAACTAAAGAAGGTGTAGGAGTGGTGCATGGCGAGCAGAAGATGTCAAGAGAGTGCTACTTCATGGCACTCAAACATATGGATAGGAAGGCTCAAACAGTGCCCACCTCGGGAAATAGCCGAGGCCGAGAATTTGAAGGATCAGATCATCCTCTTCCAATGGAATACTTGTTGGGTTTTATGCCCTAA
Coding sequence (CDS)
ATGAGGAGGTCTAGCTGCAATACAAAAACATCCAGAAAAGTTAAAATCAGACCCAGACAGGAGAAACAGGAACACATATCGCATGTTCACGAAGACCACGACCATACTACTGGAGTGTATACAGTTAAGGATGAAATAGAAACCCTAATCCAGGAAGGCTACCTTAAGGAATTTGTGGGAATGACAGAGGAGGACCATCGGACGGAGAATCAAGTAGAAAATGAAAGTCGCAGTTCGAGAGCACAACTAGAACCAGGAGAGCAAGGTAGTAGCCTAACGGCTGCCAACGTAAAAGTTCACCGAATCCTTATCGACGGAGGAAGTTCTGCTGATGTTCTCTCAATTGCTGTGTATGATGCAATGAAGCTAGGAAGGGATCGCCTAAGGTCGTGCCTCACACCATTGGTGGGTTTCGGTGGAGAAAAGGACGACCAAACTTGCACGGCTCAAAGTGGTGCCTCTACTTATCACCAAGTTTTGAAGTTTCCAACTAAAGAAGGTGTAGGAGTGGTGCATGGCGAGCAGAAGATGTCAAGAGAGTGCTACTTCATGGCACTCAAACATATGGATAGGAAGGCTCAAACAGTGCCCACCTCGGGAAATAGCCGAGGCCGAGAATTTGAAGGATCAGATCATCCTCTTCCAATGGAATACTTGTTGGGTTTTATGCCCTAA
Protein sequence
MRRSSCNTKTSRKVKIRPRQEKQEHISHVHEDHDHTTGVYTVKDEIETLIQEGYLKEFVGMTEEDHRTENQVENESRSSRAQLEPGEQGSSLTAANVKVHRILIDGGSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGEKDDQTCTAQSGASTYHQVLKFPTKEGVGVVHGEQKMSRECYFMALKHMDRKAQTVPTSGNSRGREFEGSDHPLPMEYLLGFMP
Homology
BLAST of Lag0022675 vs. NCBI nr
Match:
XP_022144467.1 (uncharacterized protein LOC111014147 [Momordica charantia])
HSP 1 Score: 107.5 bits (267), Expect = 1.6e-19
Identity = 83/243 (34.16%), Postives = 111/243 (45.68%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K + + H H H T + +K+E+E LI+ GYLKE+V EE
Sbjct: 10 KWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEYV---EEPKA 69
Query: 69 TEN-----------------QVENES-RSSRAQLEPGEQGSSLT-AANVKVHRILIDGGS 128
T+N +E ES R +A + G ANVKVHR+L+DGGS
Sbjct: 70 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQNEIANVKVHRVLVDGGS 129
Query: 129 SADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGE------KDDQTCTAQSG---------- 188
AD+LS Y AM LG L+S PLVGFGGE + + T SG
Sbjct: 130 LADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDX 189
Query: 189 ------------------------ASTYHQVLKFPTKEGVGVVHGEQKMSRECYFMALKH 192
STYHQ +KFPT GVG + GEQ++SRECY+ +++
Sbjct: 190 LVVNYTSSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRD 249
BLAST of Lag0022675 vs. NCBI nr
Match:
XP_022155873.1 (uncharacterized protein LOC111022886 [Momordica charantia])
HSP 1 Score: 105.9 bits (263), Expect = 4.6e-19
Identity = 83/258 (32.17%), Postives = 114/258 (44.19%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K P + + H DH H T + +K+E+E LI+ GYLKE+V ED +
Sbjct: 26 KWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEEVEGLIRSGYLKEYV----EDPK 85
Query: 69 TENQVENESRS-----------SRAQLEPGEQGS-------------SLTAANVKVHRIL 128
EN+S S A+LE E + +L AN KVHRIL
Sbjct: 86 ATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHNDALVITLKIANAKVHRIL 145
Query: 129 IDGGSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGEK--------------------- 188
+DGGSS ++S+ Y AM LG L+S PLVGFGGE+
Sbjct: 146 VDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSGPKSII 205
Query: 189 -------------------DDQTCTAQSGASTYHQVLKFPTKEGVGVVHGEQKMSRECYF 202
+ + STYHQ +KFPT G+G + GEQ++ RECY
Sbjct: 206 KMVDFLVVYYASSYNVILGRPKMHMLKEIPSTYHQSMKFPTSSGIGEIKGEQRVLRECYN 265
BLAST of Lag0022675 vs. NCBI nr
Match:
XP_030963320.1 (uncharacterized protein LOC115984434 [Quercus lobata])
HSP 1 Score: 104.8 bits (260), Expect = 1.0e-18
Identity = 75/229 (32.75%), Postives = 108/229 (47.16%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTTG-VYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K K+K P + + H DH H T + +K +IE LI++G L+ F+G +D +
Sbjct: 374 KWLEKMKGDPNKCNRNKYCRFHRDHGHDTDECFDLKQQIENLIRQGKLRSFLGRDHKDEK 433
Query: 69 TENQVENESRSSRAQLEPGEQGSSLTAANVKVHRILIDGGSSADVLSIAVYDAMKLGRDR 128
+ + E SR ++ GSS ++ R+L+D GSSAD+L + MKLGRDR
Sbjct: 434 LKGKAEESSRPPLGEIRVIVGGSSTVQSS---RRVLVDNGSSADILYFPAFQQMKLGRDR 493
Query: 129 LRSCLTPLVGFGGEKDDQT--------------------------CTAQSGA-------- 188
LR +PLVGFGG K C++ A
Sbjct: 494 LRPVNSPLVGFGGMKVQPVGTVTLPVVVGAYPQQVTKDVSFLVVDCSSSYNAIIGRPTLN 553
Query: 189 ------STYHQVLKFPTKEGVGVVHGEQKMSRECYFMALKHMDRKAQTV 197
STYH +KFPT+ GVG V G+Q +RECY +A+ D + QT+
Sbjct: 554 SWKVVTSTYHLSVKFPTEYGVGQVQGDQLAARECY-LAMLATDEQVQTM 598
BLAST of Lag0022675 vs. NCBI nr
Match:
XP_022156748.1 (uncharacterized protein LOC111023587 [Momordica charantia])
HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 78/225 (34.67%), Postives = 105/225 (46.67%), Query Frame = 0
Query: 30 HEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEED--------HRTENQVENE----- 89
H DHDH T + +K+E+E LI+ GYLKE ++ +R +N+V +
Sbjct: 44 HRDHDHATQDCFDLKEEVEGLIRRGYLKEERIWEKKKADVREARANREQNEVYHAYITDR 103
Query: 90 ------SRSSRAQLEPGEQGS---SLTAANVKVHRILIDGGSSADVLSIAVYDAMKLGRD 149
S QL + +L ANVKVHRIL+DGGSSAD++S Y AM L
Sbjct: 104 PVTIEFSEDEATQLFHSHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEK 163
Query: 150 RLRSCLTPLVGFGGE------KDDQTCTAQSG---------------------------- 192
L+S PLVGFGGE + + T SG
Sbjct: 164 VLKSSPAPLVGFGGERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGRLTM 223
BLAST of Lag0022675 vs. NCBI nr
Match:
XP_022150858.1 (uncharacterized protein LOC111018902 [Momordica charantia])
HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 77/245 (31.43%), Postives = 110/245 (44.90%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K P + + H DH H T + +K+E+E LIQ GYLKE+V ++
Sbjct: 18 KWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLIQRGYLKEYV---KDPKA 77
Query: 69 TENQVEN----------ESRSSRAQLEPGEQGS-----------SLTAANVKVHRILIDG 128
T+N+ E E + ++ + E +L AN KVH IL+DG
Sbjct: 78 TQNKRERQAYKIYHAFVEEQPTKIEFLEDEVTHIFHPHNDALVINLKIANAKVHWILVDG 137
Query: 129 GSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGE------------------------- 188
GSS D++S+ Y M LG L+S PLVGFGGE
Sbjct: 138 GSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSGPKSITKMV 197
Query: 189 -----KDDQTCTAQSGAST----------YHQVLKFPTKEGVGVVHGEQKMSRECYFMAL 192
+C A G T YHQ +KFPT G+G + GEQ++SRECY+ ++
Sbjct: 198 DFLVVDYASSCNAILGRPTMHMLKAIPSRYHQSIKFPTPGGIGEIKGEQRVSRECYYASM 257
BLAST of Lag0022675 vs. ExPASy TrEMBL
Match:
A0A6J1CTS4 (uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014147 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 7.6e-20
Identity = 83/243 (34.16%), Postives = 111/243 (45.68%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K + + H H H T + +K+E+E LI+ GYLKE+V EE
Sbjct: 10 KWPERMKAPSAKRSKSRYCLFHRYHGHATQDCFDLKEEVEGLIRRGYLKEYV---EEPKA 69
Query: 69 TEN-----------------QVENES-RSSRAQLEPGEQGSSLT-AANVKVHRILIDGGS 128
T+N +E ES R +A + G ANVKVHR+L+DGGS
Sbjct: 70 TQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTGREQNEIANVKVHRVLVDGGS 129
Query: 129 SADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGE------KDDQTCTAQSG---------- 188
AD+LS Y AM LG L+S PLVGFGGE + + T SG
Sbjct: 130 LADILSWTAYKAMDLGEKVLKSSPAPLVGFGGERVIPEGRIEXPVTFGSGPKSVTKMVDX 189
Query: 189 ------------------------ASTYHQVLKFPTKEGVGVVHGEQKMSRECYFMALKH 192
STYHQ +KFPT GVG + GEQ++SRECY+ +++
Sbjct: 190 LVVNYTSSYNAILGRPTMHMLRAIPSTYHQSMKFPTPGGVGEIKGEQRVSRECYYTSMRD 249
BLAST of Lag0022675 vs. ExPASy TrEMBL
Match:
A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)
HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 83/258 (32.17%), Postives = 114/258 (44.19%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K P + + H DH H T + +K+E+E LI+ GYLKE+V ED +
Sbjct: 26 KWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEEVEGLIRSGYLKEYV----EDPK 85
Query: 69 TENQVENESRS-----------SRAQLEPGEQGS-------------SLTAANVKVHRIL 128
EN+S S A+LE E + +L AN KVHRIL
Sbjct: 86 ATQNGENDSNSPVREIRTIMEEQPAKLEFSEDEATHLFHPHNDALVITLKIANAKVHRIL 145
Query: 129 IDGGSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGEK--------------------- 188
+DGGSS ++S+ Y AM LG L+S PLVGFGGE+
Sbjct: 146 VDGGSSTYIISLTAYKAMDLGEKALKSSPVPLVGFGGERVIPEGRIELPVMFGSGPKSII 205
Query: 189 -------------------DDQTCTAQSGASTYHQVLKFPTKEGVGVVHGEQKMSRECYF 202
+ + STYHQ +KFPT G+G + GEQ++ RECY
Sbjct: 206 KMVDFLVVYYASSYNVILGRPKMHMLKEIPSTYHQSMKFPTSSGIGEIKGEQRVLRECYN 265
BLAST of Lag0022675 vs. ExPASy TrEMBL
Match:
A0A6J1DRG9 (uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023587 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 78/225 (34.67%), Postives = 105/225 (46.67%), Query Frame = 0
Query: 30 HEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEED--------HRTENQVENE----- 89
H DHDH T + +K+E+E LI+ GYLKE ++ +R +N+V +
Sbjct: 44 HRDHDHATQDCFDLKEEVEGLIRRGYLKEERIWEKKKADVREARANREQNEVYHAYITDR 103
Query: 90 ------SRSSRAQLEPGEQGS---SLTAANVKVHRILIDGGSSADVLSIAVYDAMKLGRD 149
S QL + +L ANVKVHRIL+DGGSSAD++S Y AM L
Sbjct: 104 PVTIEFSEDEATQLFHSHNDALVITLKIANVKVHRILVDGGSSADIISWTAYKAMDLEEK 163
Query: 150 RLRSCLTPLVGFGGE------KDDQTCTAQSG---------------------------- 192
L+S PLVGFGGE + + T SG
Sbjct: 164 VLKSSPAPLVGFGGERVISEGRIELPVTFGSGPKGVTKMVDFLVVNYTSSYNEILGRLTM 223
BLAST of Lag0022675 vs. ExPASy TrEMBL
Match:
A0A6J1DAK4 (uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018902 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 7.1e-18
Identity = 77/245 (31.43%), Postives = 110/245 (44.90%), Query Frame = 0
Query: 9 KTSRKVKIRPRQEKQEHISHVHEDHDHTT-GVYTVKDEIETLIQEGYLKEFVGMTEEDHR 68
K ++K P + + H DH H T + +K+E+E LIQ GYLKE+V ++
Sbjct: 18 KWPERMKAPPSKRGKGRYCPFHLDHSHATQDCFDLKEEVEGLIQRGYLKEYV---KDPKA 77
Query: 69 TENQVEN----------ESRSSRAQLEPGEQGS-----------SLTAANVKVHRILIDG 128
T+N+ E E + ++ + E +L AN KVH IL+DG
Sbjct: 78 TQNKRERQAYKIYHAFVEEQPTKIEFLEDEVTHIFHPHNDALVINLKIANAKVHWILVDG 137
Query: 129 GSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGE------------------------- 188
GSS D++S+ Y M LG L+S PLVGFGGE
Sbjct: 138 GSSPDIISLTAYKTMDLGERGLKSSPAPLVGFGGEWVIPEGRIELPVTFGSGPKSITKMV 197
Query: 189 -----KDDQTCTAQSGAST----------YHQVLKFPTKEGVGVVHGEQKMSRECYFMAL 192
+C A G T YHQ +KFPT G+G + GEQ++SRECY+ ++
Sbjct: 198 DFLVVDYASSCNAILGRPTMHMLKAIPSRYHQSIKFPTPGGIGEIKGEQRVSRECYYASM 257
BLAST of Lag0022675 vs. ExPASy TrEMBL
Match:
A0A6J1DKR9 (uncharacterized protein LOC111021438 OS=Momordica charantia OX=3673 GN=LOC111021438 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 9.3e-18
Identity = 57/145 (39.31%), Postives = 76/145 (52.41%), Query Frame = 0
Query: 91 SLTAANVKVHRILIDGGSSADVLSIAVYDAMKLGRDRLRSCLTPLVGFGGEK------DD 150
+L AN KVHRIL+DGGSSAD +S+ Y AM LG++ L+S LTPL+GFGGE+ +
Sbjct: 62 TLKIANAKVHRILVDGGSSADXISLTAYKAMDLGKEXLKSSLTPLIGFGGERVIPXGXIE 121
Query: 151 QTCTAQSG----------------------------------ASTYHQVLKFPTKEGVGV 196
T +SG STYHQ +KFPT GVG
Sbjct: 122 LPVTFESGPKSITKMVDFLVVDYTSSYNAILERXTMYMLKAIPSTYHQSMKFPTPGGVGE 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CTS4 | 7.6e-20 | 34.16 | uncharacterized protein LOC111014147 OS=Momordica charantia OX=3673 GN=LOC111014... | [more] |
A0A6J1DP33 | 2.2e-19 | 32.17 | uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1DRG9 | 5.4e-18 | 34.67 | uncharacterized protein LOC111023587 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DAK4 | 7.1e-18 | 31.43 | uncharacterized protein LOC111018902 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A6J1DKR9 | 9.3e-18 | 39.31 | uncharacterized protein LOC111021438 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
Match Name | E-value | Identity | Description | |