Lag0022535 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0022535
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUlp1-like peptidase
Locationchr7: 32060432 .. 32060740 (-)
RNA-Seq ExpressionLag0022535
SyntenyLag0022535
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACATGAATCGAGGTGCAATTTACGTCTATGATTTCATGTCGAGGTACATCAAACGACCCCAAGTAGACAAATTCTTGGAGCCACTTCGTCATACGTTGTCGTATTTACTGCATGTATGCGGCGTGTATACGCAGAAGCTGGATCTGAGTAGAGAACCATGGCGCGTTGTCCATGCGAACACTGGGAAGTTACAAACGAACTCCCTCGACTGTGGCATTTTCTGTTTGCAGTTTCTAGAACATCTAGTGACTGGTTGCAATAAGGAAAATATCGTACAATCAAAGATGAATATCTTTAGGACCTAG

mRNA sequence

ATGGACATGAATCGAGGTGCAATTTACGTCTATGATTTCATGTCGAGGTACATCAAACGACCCCAAGTAGACAAATTCTTGGAGCCACTTCGTCATACGTTGTCGTATTTACTGCATGTATGCGGCGTGTATACGCAGAAGCTGGATCTGAGTAGAGAACCATGGCGCGTTGTCCATGCGAACACTGGGAAGTTACAAACGAACTCCCTCGACTGTGGCATTTTCTGTTTGCAGTTTCTAGAACATCTAGTGACTGGTTGCAATAAGGAAAATATCGTACAATCAAAGATGAATATCTTTAGGACCTAG

Coding sequence (CDS)

ATGGACATGAATCGAGGTGCAATTTACGTCTATGATTTCATGTCGAGGTACATCAAACGACCCCAAGTAGACAAATTCTTGGAGCCACTTCGTCATACGTTGTCGTATTTACTGCATGTATGCGGCGTGTATACGCAGAAGCTGGATCTGAGTAGAGAACCATGGCGCGTTGTCCATGCGAACACTGGGAAGTTACAAACGAACTCCCTCGACTGTGGCATTTTCTGTTTGCAGTTTCTAGAACATCTAGTGACTGGTTGCAATAAGGAAAATATCGTACAATCAAAGATGAATATCTTTAGGACCTAG

Protein sequence

MDMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVYTQKLDLSREPWRVVHANTGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFRT
Homology
BLAST of Lag0022535 vs. NCBI nr
Match: XP_022155371.1 (uncharacterized protein LOC111022515 [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-12
Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 1   MDMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVY-TQKLDLSREPWRVVH 60
           +DM +  I+VYD +  +I   ++   + PL HT+  LL+ CG+  T    L +  WRV H
Sbjct: 36  IDMTQSEIFVYDPLPGHISTSKLMTDIRPLSHTIPSLLYACGLMDTTDCKLKKTSWRVYH 95

Query: 61  ANTGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFR 102
             T   Q  S+DCGIF  +FLE+LV+G + E +VQ++++  R
Sbjct: 96  PTTDTRQKGSIDCGIFACKFLEYLVSGNSLETLVQAEVSHIR 137

BLAST of Lag0022535 vs. NCBI nr
Match: XP_038875042.1 (uncharacterized protein LOC120067568 [Benincasa hispida])

HSP 1 Score: 80.5 bits (197), Expect = 9.3e-12
Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query: 2   DMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVYTQKLDLSREPWRVVHAN 61
           ++NR  ++V+D +     + +++ FLEPL +TL  LLH C +   K D+    W++    
Sbjct: 40  NLNRDQLFVFDSLPSMTSKKKLESFLEPLTYTLPSLLHYCDLKRWKPDIKTSRWKISQPT 99

Query: 62  TGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFR 102
           +   Q   LDCGIF ++ LEHLVTG     I Q K+  +R
Sbjct: 100 STNTQYGLLDCGIFVVKLLEHLVTGNALSEITQDKITDYR 139

BLAST of Lag0022535 vs. NCBI nr
Match: XP_038874902.1 (uncharacterized protein LOC120067405 [Benincasa hispida])

HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11
Identity = 40/101 (39.60%), Postives = 57/101 (56.44%), Query Frame = 0

Query: 1   MDMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVYTQKLDLSREPWRVVHA 60
           MD+ RG I+V+D +S Y    ++  +LE L  T+  LLH C V   K DL    W++   
Sbjct: 90  MDIYRGHIFVFDSLSSYTPMTKLVNWLELLTVTVLSLLHYCDVDRSKSDLYTVRWKISRP 149

Query: 61  NTGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFR 102
               +Q  SLDCGIF ++ L+HLVT  +   I Q K+N +R
Sbjct: 150 MNVNIQHGSLDCGIFVIKLLKHLVTSTDPSVITQEKINEYR 190

BLAST of Lag0022535 vs. NCBI nr
Match: XP_022154364.1 (uncharacterized protein LOC111021646 [Momordica charantia])

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-09
Identity = 32/101 (31.68%), Postives = 56/101 (55.45%), Query Frame = 0

Query: 1   MDMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVYTQKLDLSREPWRVVHA 60
           +D + G + V+D        PQ+++ L+P+   +  L+   GV+  K ++   PWR+   
Sbjct: 99  IDFDEGELIVWDSFMNMTPLPQLEQELKPMITIIPTLICRVGVHLYKPNIPLTPWRIRRV 158

Query: 61  NTGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFR 102
           ++   Q    DCGIFC+ F E+ VT C+ + + QS+M+ FR
Sbjct: 159 SSAPQQGMDGDCGIFCINFFEYDVTSCSFDTLTQSRMSFFR 199

BLAST of Lag0022535 vs. NCBI nr
Match: KAA0067770.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 36/100 (36.00%), Postives = 53/100 (53.00%), Query Frame = 0

Query: 2   DMNRGAIYVYDFMSRYIKRPQVDKFLEPLRHTLSYLLHVCGVYTQKLDLSREPWRVVHAN 61
           DM +  IYV+D M  Y+++  VD+ L+ L   ++ L    GV       +  PW V  + 
Sbjct: 107 DMRKCKIYVFDSMPNYVEQKLVDQALQMLARCIASLEIAIGVNLHSERFTYSPWPVRRSK 166

Query: 62  TGKLQTNSLDCGIFCLQFLEHLVTGCNKENIVQSKMNIFR 102
           T   +  SLDCGIFC +F+E LVT  +   +  S M +FR
Sbjct: 167 TTLQKGRSLDCGIFCSKFIECLVTEADLGCLTVSNMKLFR 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155371.14.2e-1238.24uncharacterized protein LOC111022515 [Momordica charantia][more]
XP_038875042.19.3e-1236.00uncharacterized protein LOC120067568 [Benincasa hispida][more]
XP_038874902.12.1e-1139.60uncharacterized protein LOC120067405 [Benincasa hispida][more]
XP_022154364.12.5e-0931.68uncharacterized protein LOC111021646 [Momordica charantia][more]
KAA0067770.12.1e-0836.00Ulp1-like peptidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003653Ulp1 protease family, C-terminal catalytic domainPFAMPF02902Peptidase_C48coord: 3..101
e-value: 2.6E-8
score: 34.0
NoneNo IPR availableGENE3D3.40.395.10Adenoviral Proteinase; Chain Acoord: 1..102
e-value: 1.7E-11
score: 46.0
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0022535.1Lag0022535.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity