
Lag0022159 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCATCCCTATTCCTCGACTACGACTCGTTTTCGATACCCTCCACAGGTTACTACATCACTTCCCTTTTTCCCTTCATATAACTTTACTCTGCTGTTCTTTCCTCCTAACCAGCAACAGTCGTCTCCTTACCCAACTTTAACCCCTCCCTTGAATATTATCTGACTCTAACTATCTGTTGTGGAAGAATCAATTGCTCAATCATATAATCACATTCAATATGGAAAACTTCATCAATGGAACTCTGGCTCTACCAAAACACTTGGATGCTACTCAAACCCACTAAACCTTCAATTTCTTTTTTGGCAAAAGTACAATATAACTCTTATGAGATGAATTTATTCCTTCCAAAACGAAGATAGACTTGGTGAGATAATTGAGTATTCCTCTGCTTATGAAATTTGGGAGAATTTGCGTGTTGTCTATGAATCATCTTCTATAGCTCATATAATGGTTCTTAGATCTCAACTACAGAAAATTAGAAAGGATGTTATCTCAATTACACAATACTTGACTCATATCAAAGACGTTGACGACAAGTTCTCAGCCATCGATGAGCCTCTTTCCTATATGGACCATCATGGTTACATTCTTGAAGGACTTGATTCGGAATACAATCCTTTCGTTACCTCCATTCAAAATTGCACTGATCGCCACTCCCTTGCTGATGTTCGCAGTCTTCTTCTTGCATATGCAGCTCGTCTGGAAAAGAAAACCTCTGTTGATACGTTAAATATGGTGCAAGCCAATCTCGCCAATCTTTCGATAAGTTCTAATCAAAAGCAGTTCCAACACCCTTCCCAAAATCTCAAACCAAAATTCTTTTCTAGACCTTCTTCCCCTTTTTCATTTCCATTTCCCTAG ATGTTCATCCCTATTCCTCGACTACGACTCGTTTTCGATACCCTCCACAGACTTGGTGAGATAATTGAGTATTCCTCTGCTTATGAAATTTGGGAGAATTTGCGTGTTGTCTATGAATCATCTTCTATAGCTCATATAATGGTTCTTAGATCTCAACTACAGAAAATTAGAAAGGATGTTATCTCAATTACACAATACTTGACTCATATCAAAGACGTTGACGACAAGTTCTCAGCCATCGATGAGCCTCTTTCCTATATGGACCATCATGGTTACATTCTTGAAGGACTTGATTCGGAATACAATCCTTTCGTTACCTCCATTCAAAATTGCACTGATCGCCACTCCCTTGCTGATGTTCGCAGTCTTCTTCTTGCATATGCAGCTCGTCTGGAAAAGAAAACCTCTGTTGATACGTTAAATATGGTGCAAGCCAATCTCGCCAATCTTTCGATAAGTTCTAATCAAAAGCAGTTCCAACACCCTTCCCAAAATCTCAAACCAAAATTCTTTTCTAGACCTTCTTCCCCTTTTTCATTTCCATTTCCCTAG ATGTTCATCCCTATTCCTCGACTACGACTCGTTTTCGATACCCTCCACAGACTTGGTGAGATAATTGAGTATTCCTCTGCTTATGAAATTTGGGAGAATTTGCGTGTTGTCTATGAATCATCTTCTATAGCTCATATAATGGTTCTTAGATCTCAACTACAGAAAATTAGAAAGGATGTTATCTCAATTACACAATACTTGACTCATATCAAAGACGTTGACGACAAGTTCTCAGCCATCGATGAGCCTCTTTCCTATATGGACCATCATGGTTACATTCTTGAAGGACTTGATTCGGAATACAATCCTTTCGTTACCTCCATTCAAAATTGCACTGATCGCCACTCCCTTGCTGATGTTCGCAGTCTTCTTCTTGCATATGCAGCTCGTCTGGAAAAGAAAACCTCTGTTGATACGTTAAATATGGTGCAAGCCAATCTCGCCAATCTTTCGATAAGTTCTAATCAAAAGCAGTTCCAACACCCTTCCCAAAATCTCAAACCAAAATTCTTTTCTAGACCTTCTTCCCCTTTTTCATTTCCATTTCCCTAG MFIPIPRLRLVFDTLHRLGEIIEYSSAYEIWENLRVVYESSSIAHIMVLRSQLQKIRKDVISITQYLTHIKDVDDKFSAIDEPLSYMDHHGYILEGLDSEYNPFVTSIQNCTDRHSLADVRSLLLAYAARLEKKTSVDTLNMVQANLANLSISSNQKQFQHPSQNLKPKFFSRPSSPFSFPFP Homology
BLAST of Lag0022159 vs. NCBI nr
Match: XP_038887133.1 (uncharacterized protein LOC120077323 [Benincasa hispida]) HSP 1 Score: 172.9 bits (437), Expect = 2.5e-39 Identity = 96/166 (57.83%), Postives = 122/166 (73.49%), Query Frame = 0
BLAST of Lag0022159 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 155.6 bits (392), Expect = 4.1e-34 Identity = 85/170 (50.00%), Postives = 115/170 (67.65%), Query Frame = 0
BLAST of Lag0022159 vs. NCBI nr
Match: GFS33695.1 (hypothetical protein Acr_00g0030110 [Actinidia rufa]) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-26 Identity = 73/173 (42.20%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Lag0022159 vs. NCBI nr
Match: GFY82848.1 (hypothetical protein Acr_02g0010880 [Actinidia rufa]) HSP 1 Score: 130.2 bits (326), Expect = 1.8e-26 Identity = 73/173 (42.20%), Postives = 107/173 (61.85%), Query Frame = 0
BLAST of Lag0022159 vs. NCBI nr
Match: XP_038891713.1 (uncharacterized protein LOC120081111 [Benincasa hispida]) HSP 1 Score: 121.3 bits (303), Expect = 8.6e-24 Identity = 64/112 (57.14%), Postives = 84/112 (75.00%), Query Frame = 0
BLAST of Lag0022159 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 8.4e-06 Identity = 36/154 (23.38%), Postives = 71/154 (46.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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