Lag0022157 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022157
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	RNase H domain-containing protein
Location	chr7: 19857847 .. 19865721 (-)
RNA-Seq Expression	Lag0022157
Synteny	Lag0022157

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGTCACCCATGTGTAATATATGCAAATCACAAGAGGGGACTATTGACCATACTTTATGTGGTTGTAAGCGTGCCAAAAGAATATGTGATACACTATTCCCACGCGTGGATGAGGCCATCCAAGTAGGAAATAATTTTGCGGATCGGATTATATGGCTTGCTAGAAACCTCATGAATAGTGAATTTGAGAAAGCATGCATTACTTTTTGGGCCATATGGAACGACAGGAATAGTTTTTGTCATAATTGTCAAGTCATGGATTGGAGGGATCAGTGTGGATGGATTATTGATTATTGGGAGAGTACAAGCACAAAAGAAAGGCATCATCCAAAGACGGATGTGATCGATACACACAATTTACAAATGCCAAGATGTTCTGTTCAGTTATTTACTGATGCAGCAATTGGAAAAAGTAATATAGGTGCCGGATATGGGGCTCTTATCCTTGATTTGGATGGCAAGGTTTGTGGTGCAATGGAGTATATGGATCCCACACCTCATTCTCCATTGGCAAAAACTTGTTGCCTTGTGCAAATTGATTCTAAATATGCAAGAAAAACCCACAAATACACGTGCAAGTGCACACGATCAGCAGCAAGTGTAAGTATTTTTATATAGTTTCCACAAGGATTGATGCAACGAAAATCACTATTTCTAAGCCTATTTTCAATGAAATTCAACGTAACCGAGGGACAAATATTTTTCTTAACTAAGTGTAAGAGATTAAAATGGTAAACAAGCTTAAAGTGATAAGAACTTAAGTAAATTTCAATAAAAACAGTGAATCAACACAGAGAAGCCTAGGTTCAGATTAGGGACTGTCTACTCTCACAAGCTGTTTGCTGTAGCAGAACTCTATATTTACAACTCACCCAGTATTTTCTACGGGAATTTTCCAATTCTCCTATAGTTTAGGTGTTTAAACTCCCATTTAACCCCTTCTTTTTAGCTCAATTGATTTAGTGCCTTAGGTGGTTATTTATCCATAAATACCCACTCATTTTCATGACCTAGAAATGCTAAGGTAAAGCAAAGTAGTCGGTTATCAATTGTTTTCCCAAACACTTAATAACATTGCTAGAAAATGGTTGGCCAAACAAAATTCCAGCTTAAATCATGAAGAACGCTTTACTTTAAGTTGCAATATATAGAGTTCCACAAAAACAAACAACAAGTTCAAGCTTAAGCACCCTAATCCTCACCTAAGAGGATTTATCTCATGTTCAAGGTGAAATAATGAAAATACAGCAGCAAACAGCCATATAAACCATCCTTACAACCTTTAGTACAAACTAAATACCAAGGAAAGAGGGATAAAGAGAAGAAGAAACTAAAGGAGAAGCTTCTAGGAGAGATTCCACATTTTCCAAGCTGGAAAGTCTTCAATCAGCTGCTTCCTTCACCTCCCTTCTCACGGTTTTTCTCCAAACAGCAGCCTCCTTTTTGAAATTCCTTCTCCAGCTGATTATTCTCTCATTTTGGGCCAAAGAACTATTTATATCAGCTCATAACATTGAATTCAGGGCTGATTGGACATATGTTTCCACATGGGTCTTCCCCAATTGGTTGAGATGGGACAAATCAGCTCCCAAAAGGTGCCAACTCATTTAATGAAAGCTCCCACGGGTACAGCACGTGCAGTAATTTAATTCCAGACTTTTGGCCTTCTGCTTATGAAATAAGTTGCTGTAGCACAACCTGAGTGACCATACACCAGAAAAATCAGTTTAAAACATAAGAAATCTGCACCAAATTCAACTAAGCTTGACCTACTGATATGTAAAAATTGTTCATCAAAGAATACTCATTTTCAAGCACAAACCAAAGCTCAAACACATCAAAGAGTAGAGTTTTTAAGCCTAAAAGAAAGCCAATAGCTCTTATTTCTAAGAGCTATCAGTGGCAGAGATAAACGCCATTATTCATGGACTTAGATTGTTGCAGCGTATGGAAATATCCAACGCTACTGTTTATTCAGATTCGTTAGTAGCTGTTAATATGATTCGAGGTGAACTTCAAGTAACAACAAATGTCCATCATTGGGTGGTCCAAATTCAGAATATGAAGCTGTCCTTCCAGGAATTGTCATTCACCCATATACCTCGGGAGGCAAATAGGGGAGCTGATTTTCTTGCTAAGGACGCGTTAAATAGATCGCAATCTATTCTTTAGTTAGACAATTTTCCTCTTTGGTTGATTTCTATGGGTAACATTACTCATTGCAATTGTACTCATCATTGTGTTTGCTCAAATTAATGAAATGATCTGTTTTAGCCTGAAAAATAAAATAAAATTATAATCAAGGGTGGGCTAGCAGCCCCAAACTTAATATTAACGGTTCTAAAACACAATCATAATGAAGGGTGTCTAAATTAATTTAATTACAAAAGTTAAAAGTTTTAATTGATATAATTACTAGTTTAAGGTTTTAAGTGATAGAACTTCTAAAATTTAGGGGTAAAAATTGATTTTTGTCATTATTTTTAAGAATATAGTATTGCAATTTTTAGAGTAGAGGTTTGAATTTTCAACCTTTAAAAAATTTTACTAGTATCAATTTGAATATAGTTCAATAAATTATAGTTAGTATCATTTGAAAGATCGATGGTTTGATTCTAGTTGCACAATTTCAATTGTGTTGATTTAAACATTGACCTAGGCTCATTTTGACGTTAGCAAAATATTTTCATAAAGTGTAAACAAAAATGAAAATTAAGCCGATTAAAGTAGAGAAAATATCCTATCATCATGAAAATACAAAAGTCAAAATGAGTATAGTTCAACGATAATTCGCATGTACTCTCGACAAAAATGTTCGAGGTTCGAATCCTACACCACTACTACAAATTTGGCCTTTGTTGACGCTTGGCTTTTTACGTTTATTGACGCTTGTGTCAAAAAAGCGTCAATAAACGTAATTTTTGTACTTTAAAATAAATTATTAATAATTAAATAGATATATTGACGGTTTTATGGTATCAAGAAATGATATGGGTTATGTTGACGGCAAAAAGCGTCAATAAATGTGATTAGAAACGTACTTTACGTAGATTTTCGTCCAACTCCGCCTTTTCACATAGTTGACAGACAAAAACATCAATGAAAAGGGTTTTGTTGACGGTTTTTATTGACGCTTATTAGCCGTCAATAAAAACCGCATTCATTGATGGCTAATAAGCGTCAATAAACATTACTATATTGATGCGCAATAAACGTCAATATTAATGAGGGTTTCTTGACGGGTATTAAGCGTCAAAAAATTTAAGCTTTTTTTAGATTATAGATTTAAGTTTAAATTACTCCCAAACTTAAAAGTGATTTTAGGAGTTTAAATTAGGTTTTTAATTGAAAAATAGATAAAGTTGAAAAAAAAAAAAGAAACCCAAGACTTTCGTTTGTTTTGTTTATTTGGATGGATTAAAAGAAATAAAAGAAAAATTAAAAAATAAAAAATAAAGAAAAGAAAAAAAAAACCCTAAGAATCCTCATCCTTTCTTTTTCCCTCTCTTTCTTGTTCAAGCAGCCTCCAAAAAAAACTGTGAGTCTTCGTGAAGTCGCCCGTGAGTCTCCCTTTTCCTCTCTCCCTCATTTTCTCTCCGGCCGCCGTCTTCTCCCCGCTGCTTGCAACCACGAAGTAGCCGCCGCCCGCTGCTTGCAACCACAGAGTCGTTGCCACCTGCTAAGAAGAAGACGTGTGCCGCCCTGTGAGTCAACCGGGTTCGAAATGTCCCCCACTGTTTAACATCTCATAGGTCGTCTCGTACTTGCACCAGTAAACTGTCGACGACGCTGCCACATCACCGAGTAACTCTATAAGGTAATTTTGACACTGTTCCATCAATTTTTGTCATTCTCATACGATTTATCATTTAACTTGAACACATGTTTATAATATTGTTGTGGATTCTATTCAATTGATGATGAAACTATGCATTTAGCTTATGGAAATAGGAGGAAGAGGAGTAGAAATGGTTTTTCACTTTGTTCCTCCATGGCCAAGTAGATAATTCACTTTGTCACTCATCTTTCCCACACCGCTCTCAATCTTTGAATATATGGATGAATTGGCCCTTTTCGCCACTTTTTTAACTCCTTAGTTTGTGAAAGAGTGGTGCCTCTTTCTTTTTGTGATCTAGGGATGTTCGTCCAGGTGAATTCTATTGTTTATTTAGGAAGGAATTGTTGTTCATTGCAATTTGGGAATCTAGAAGTTAATCTGTATGCAACCAAGTTACCCAGAACAGTTTTAGGTCTAAATCTTGTTTTAAACATTGAACTTATGCACATGTTATCTTCATTATTTCAAAATTTTTGTTTTAGTTTCTAAAATTTGTATTTATAATCTGTTTTGATAGAAATCTCCTGTGGTGCTTAGTAAATTTGTGTTTTAAGCTACATATTATTGGGTCAAGTATGTATGGAGTCTGGAAAAAGGTAGTCATAATGGATTATTATGAAAGTTCATGACTCAAGTAAAGCATTCCACTATACGAGACTAAAATAAAAACGTGTGGAAGTTTATAGAATCAAATCTCAAATCTGGTTTGAACCACAATTTTATTACCTGTGTTGTAGGATTTAGGAAGCTAAAAGTATCATTTGTGCTAGCTTTATCAACCTCTTCAATCCTTATCAAAATGTGTGTAGGAGAACTATTGTTGAAAGACCACCCTGAGGAAGCTATACATTTAATGAAACCAAAGTTTTATAAAAGGAACAACTTGATGCTATAAAACAAAGTTATATAAAACCACAGTTTACTGCTTTTTTCCTCCATGATCATGAAGTTTTAGCTATTTCTAATTTACTGGTGAAAAAAGCAGGGGCGTTACATTCCATTCTTTTCCCGATGCGTTGTTTCCTCAACCTTGCAATTCCTTCTTCTCTCCCAGTTGACTCTCATTCCACTGTTTCTGATAATGAGTGTTACGCCCTCCATTCTCTTACACTCTCATGGAACAAAAAAAATGGTAATGGGTGTTACCCTCCATTATTTTACACTCTCATTGCGATTTGTTGTTTCTGATTGCAATTCCATTATTTGTAGGATTTTGAAAATTTTCCCTAAACATAATTGCCAATCAGTATTTTATTGTGAAATTGACTTGTTGAGAGACGAGAAACAATGAAATGGAAAGAGCAAAGTCAGTGTTCTATGCTTTTTTTCCTTTTCTGCGATTGCTTTTGCTATGGGCTTCATTTTACGGGTGTCTGCTAATGGTGAAGGTTTGTGATTCTGCTACCTTTTTCTCATTGTGCCATTTATTTTTAGCAACAAGAACATGTAGTTACGAATTTCACGAGTTTTAGTATTCTATATTTAACATTTTTTTACTTGAAGTGCATGACTTTGTTTGGTCATTGATATCTGTTGTTGGGATTTTTTTTCTTGGTTTTGGTTCTACTATTGTTAATGAAATCCCAATTTTTTGGATTTCACATGTAATTGGTCTATTGAAAGTTTTAATCTCTCTTCAAATGTTACCATTCTCAAAATTTTCCTTCCTTTTTTATACTTAACTTTTTCTTTGTTAGTTACAACTTTGCATGTGTTACCTTTTTATTTTGTTTGCTTTAGCCTCCTTCCAATATTCAAGTTTAGTTAAGTATTGTTGTTATGTTCATAAGTTTTGATAACTTTAATTGTTTGTGCTAATTTGATGAGTTTAATATTGATGATCAAGATAAGTTCAGTTGACATGTTTATAAGTTTTGATAAGCTTAATTTAATTTAGTTGTTATGTATATGAATTTTGATAGATTAATTAGCTAAGTTTTGTGTTAGTTAAATTTTTAATAACTCTAATGGATTGTGTTAGTTTGATGAGTTTAATATTTGTGTTTATGATAAGTTTGATTATGTTGTTAAGTTTTGCTTAATTTATTTGTTATGTTTACGAATTCTTTATAAGTTAGTTAAGTTTTGTATTTATGATCAATAAAATTTGATAACTTTAGTTGTTTGTGTTAATTTGAGAGTATAGTTATTGTTTGTGTTCATTCAAGTATATGTTATTCATACCACTAATCTTAATTATCTTGCTTACATTATTTGCATTTCTTCTTATGTATCAGATTTGATCCTGTTGATCATCAATGACTTCAAGTACAAATTGCACCATATTTGATCAACCTTCAAAGAGTTATGTGGGACTTTTTTCTTTTTTCATTTTTCATTTGCTTTTATTTTTGCAAGTGACAATTTTGCACTCAACAAACACCATAATGTTGTGTAATGACACAATAGCTTCTAAATTGAATGCCTCTTTATATATAACAATTTTCTAGATAAATGACTTATCCATAAGATTGCCCATGATTAGTTGATAAATGACTTATCCATAAATCTGGCCAAATCAGTTGGCTAACTCAATTTTTTTGGAGAAAGTATTTCACAGCACTAGAATGTTTGATGATGGTGTTTATTATTGAATTTGGTTGTTCATTTCTATAAGTATTGATCTCTTAATACATGAAGATTGAAATTCTCATTGACCAGTTATGTAATGAATAATCCAAAAGTCTGCCAATGGTGTTCTGCTTGTTTGTATTGTGAGGGTGGTGCAAGGTTTGCAACTGGGTCTTTTGGGAGCGTTTCAGTTGTTTGCTTGTTACTTTTGTATAAATGCAGGTTGTAGAGGAGGGGTAAAAATAATCGGGAGCTTTTTTTTTTTTTTTTTTTCAAATACGTATAGTTGACGGTTAAAAAATGTCACTAAAAATATAATTATTGATGGATATTAACCGTCAATGAACGTACAATTTGACAATTTAACATGGTAACATTGACGGTTCATAAACGTCAATAAAAAGATATATTGACAATGTAAAGATGTCAATAAAGATATATATATTGACATTTTTTATCCTATAATTGACATTTAAAAAACGTCAACATAAGTTTATATTGATGATTTATAAATATCAATAAATGTGGCAACATTGACGCTTTATGGATATCATTGACAGATAAAAAGTGTCAATAATAAGATTTGTTGATGGCTATTAAACGTCAACAAATGTGGCTATGTTGACGCTTTATGAATATCATTGACGGATAAAACGTGTCAATAATCTCTTTGTTGATGGCTTATAAACGTCAACAAAGACATCTTCATTGACGTCCTATAAGCGTCAATGAAAACAGTAATATTGACGCTTTAGTTTTATTGATACCACTTCAATTGACTCCTAAAAAGCGTCAATGAAAGTGATAGTTGATATTTTTTAGCCGTCAACAAAGGCCAAATTTGTAGTAGTGCACCCTCGAATATTGTTGAACTAAACAAATTGTGAAAAAATACAAAATTTCATCATACTAATAAAAGAAACCATCCATGAGCATAGCTCAATTCCATTACTTAGGCACCATTTGGTTTGTGATCCTTTTTCGTTTTTATGTTTTCAAAAAGAAAAATAAAGGAAAATAATAAAAATGCATTTGGTATACTTATTTTCAAAAACCATTTTAGAAAACAACTAAAAAAAGTAGCATATTTTAAAAAATAATAAAATGTTGTTTTCGTTGTTTTATTTTATTTTATTTTTAAAATAATGGAAACACGGGATACAACTTTTTTTTTTAAAAGCACGGGATACAACTTTAAAAACATGGGATATACTTCTTTTTTTGTCAATAATATTGTGTTTGTTATAGGTAATTTTGGACCACTCCGAAATATAAGGAATTGGCCAGAACAGCAAAGCACCAGCCCGAAGACACGACTAGGAAACGGACCCCGAAGGAGAGATAGGTCGAAGAGTTGGGCCAAGGTCGAGGCCAACCATCGACCCACTTGTGTGGGTCGAGTTTCCTCTCCCTCCGTTCGGTTCTGGTGTCAGGGGTCATCCCGGTTCGACTTGGTTTAG

mRNA sequence

ATGGATTTGTCACCCATGTGTAATATATGCAAATCACAAGAGGGGACTATTGACCATACTTTATGTGGTTGTAAGCGTGCCAAAAGAATATGTGATACACTATTCCCACGCGTGGATGAGGCCATCCAAGTAGGAAATAATTTTGCGGATCGGATTATATGGCTTGCTAGAAACCTCATGAATAGTGAATTTGAGAAAGCATGCATTACTTTTTGGGCCATATGGAACGACAGGAATAGTTTTTGTCATAATTGTCAAGTCATGGATTGGAGGGATCAGTGTGGATGGATTATTGATTATTGGGAGAGTACAAGCACAAAAGAAAGGCATCATCCAAAGACGGATGTGATCGATACACACAATTTACAAATGCCAAGATGTTCTGTTCAGTTATTTACTGATGCAGCAATTGGAAAAAGTAATATAGGTGCCGGATATGGGGCTCTTATCCTTGATTTGGATGGCAAGGTTTGTGGTGCAATGGAGTATATGGATCCCACACCTCATTCTCCATTGGCAAAAACTTGTTGCCTTGTGCAAATTGATTCTAAATATGCAAGAAAAACCCACAAATACACGTGCAAGTGCACACGATCAGCAGCAAGTCGTATGGAAATATCCAACGCTACTGTTTATTCAGATTCGTTAGTAGCTGTTAATATGATTCGAGGTGAACTTCAACCTCCAAAAAAAACTGTGAGTCTTCGTGAAGTCGCCCGTGAGTCTCCCTTTTCCTCTCTCCCTCATTTTCTCTCCGGCCGCCGTCTTCTCCCCGCTGCTTGCAACCACGAAGTAGCCGCCGCCCGCTGCTTGCAACCACAGAGTCGTTGCCACCTGCTAAGAAGAAGACGTGTGCCGCCCTGGGCGTTACATTCCATTCTTTTCCCGATGCGTTGTTTCCTCAACCTTGCAATTCCTTCTTCTCTCCCAGTTGACTCTCATTCCACTGTTTCTGATAATGAGTGTTACGCCCTCCATTCTCTTACACTCTCATGGAACAAAAAAAATGGTAATTTTGGACCACTCCGAAATATAAGGAATTGGCCAGAACAGCAAAGCACCAGCCCGAAGACACGACTAGGAAACGGACCCCGAAGGAGAGATAGGTCGAAGAGTTGGGCCAAGGTCGAGGCCAACCATCGACCCACTTGTGTGGGTCGAGTTTCCTCTCCCTCCGTTCGGTTCTGGTGTCAGGGGTCATCCCGGTTCGACTTGGTTTAG

Coding sequence (CDS)

ATGGATTTGTCACCCATGTGTAATATATGCAAATCACAAGAGGGGACTATTGACCATACTTTATGTGGTTGTAAGCGTGCCAAAAGAATATGTGATACACTATTCCCACGCGTGGATGAGGCCATCCAAGTAGGAAATAATTTTGCGGATCGGATTATATGGCTTGCTAGAAACCTCATGAATAGTGAATTTGAGAAAGCATGCATTACTTTTTGGGCCATATGGAACGACAGGAATAGTTTTTGTCATAATTGTCAAGTCATGGATTGGAGGGATCAGTGTGGATGGATTATTGATTATTGGGAGAGTACAAGCACAAAAGAAAGGCATCATCCAAAGACGGATGTGATCGATACACACAATTTACAAATGCCAAGATGTTCTGTTCAGTTATTTACTGATGCAGCAATTGGAAAAAGTAATATAGGTGCCGGATATGGGGCTCTTATCCTTGATTTGGATGGCAAGGTTTGTGGTGCAATGGAGTATATGGATCCCACACCTCATTCTCCATTGGCAAAAACTTGTTGCCTTGTGCAAATTGATTCTAAATATGCAAGAAAAACCCACAAATACACGTGCAAGTGCACACGATCAGCAGCAAGTCGTATGGAAATATCCAACGCTACTGTTTATTCAGATTCGTTAGTAGCTGTTAATATGATTCGAGGTGAACTTCAACCTCCAAAAAAAACTGTGAGTCTTCGTGAAGTCGCCCGTGAGTCTCCCTTTTCCTCTCTCCCTCATTTTCTCTCCGGCCGCCGTCTTCTCCCCGCTGCTTGCAACCACGAAGTAGCCGCCGCCCGCTGCTTGCAACCACAGAGTCGTTGCCACCTGCTAAGAAGAAGACGTGTGCCGCCCTGGGCGTTACATTCCATTCTTTTCCCGATGCGTTGTTTCCTCAACCTTGCAATTCCTTCTTCTCTCCCAGTTGACTCTCATTCCACTGTTTCTGATAATGAGTGTTACGCCCTCCATTCTCTTACACTCTCATGGAACAAAAAAAATGGTAATTTTGGACCACTCCGAAATATAAGGAATTGGCCAGAACAGCAAAGCACCAGCCCGAAGACACGACTAGGAAACGGACCCCGAAGGAGAGATAGGTCGAAGAGTTGGGCCAAGGTCGAGGCCAACCATCGACCCACTTGTGTGGGTCGAGTTTCCTCTCCCTCCGTTCGGTTCTGGTGTCAGGGGTCATCCCGGTTCGACTTGGTTTAG

Protein sequence

MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDYWESTSTKERHHPKTDVIDTHNLQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAMEYMDPTPHSPLAKTCCLVQIDSKYARKTHKYTCKCTRSAASRMEISNATVYSDSLVAVNMIRGELQPPKKTVSLREVARESPFSSLPHFLSGRRLLPAACNHEVAAARCLQPQSRCHLLRRRRVPPWALHSILFPMRCFLNLAIPSSLPVDSHSTVSDNECYALHSLTLSWNKKNGNFGPLRNIRNWPEQQSTSPKTRLGNGPRRRDRSKSWAKVEANHRPTCVGRVSSPSVRFWCQGSSRFDLV

Homology

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BLAST of Lag0022157 vs. NCBI nr
Match: KAF4376283.1 (hypothetical protein G4B88_008415 [Cannabis sativa] >KAF4376324.1 hypothetical protein F8388_026124 [Cannabis sativa])

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-08
Identity = 50/193 (25.91%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNL 60
           M+++P+C++C     T+ H L  C + K++   L P   +  ++G  +  D +  L   L
Sbjct: 628 MNINPVCDLCGYYAETLPHALWSCDKVKQVW-KLIPWYKQCGKLGEGSMFDMLTALRAKL 687

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDYWESTSTKERHHPKTDVIDT 120
             +EFE A    WAIW +RN   +   VM+      W+   +   S+ +    K  +   
Sbjct: 688 SRTEFEDALKIMWAIWENRNRKWNKLHVMNGIQLLDWVFTAYPPASSNQMEEEKKKMASP 747

Query: 121 HN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAK 180
            N    Q P    + +  DAA+  + IG G G +  D  G V  A M Y+  +    +A+
Sbjct: 748 SNPIHWQAPHVGKICVNCDAAMIPNQIGVGIGFIWKDWHGNVLNAGMIYIHSSCSINVAE 807

Query: 181 TCCLVQIDSKYAR 188
           T  +++   K+ R
Sbjct: 808 TWAILEALKKHPR 819

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BLAST of Lag0022157 vs. NCBI nr
Match: KAF4401718.1 (hypothetical protein G4B88_000766 [Cannabis sativa])

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-08
Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNL 60
           MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L
Sbjct: 552 MDVNLNCDLCGHQAETLTHALWGCAKVKTIW-KLVPWYHKCAHFKNGSMFDIMVTLKDHL 611

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-IDYWESTSTKERHHPKTDVID 120
             SEFE+A    WAIW +RN + +   VM+      WI   Y +S + KE+  P    ID
Sbjct: 612 HKSEFEEAIKIMWAIWENRNKYWNKLPVMNGIQLLDWISTAYPDSRNNKEQ--PMN--ID 671

Query: 121 THNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSP 180
             + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y        
Sbjct: 672 MKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMVY-------- 731

Query: 181 LAKTCCLVQIDSKYA 187
             ++CC V++   +A
Sbjct: 732 -HQSCCSVEMAEAWA 732

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BLAST of Lag0022157 vs. NCBI nr
Match: KAF4399153.1 (hypothetical protein G4B88_023747 [Cannabis sativa])

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-08
Identity = 55/195 (28.21%), Postives = 89/195 (45.64%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNL 60
           MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L
Sbjct: 135 MDVNLSCDLCGHQAETLTHALWGCAKVKTIW-KLVPWYHKCAHFKNGSMFDIMVTLKDHL 194

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID-YWESTSTKERHHPKTDVID 120
             SEFE+A    WAIW +RN + +   VM+      WI   Y +S ++KE    +T  ID
Sbjct: 195 HKSEFEEAIKIMWAIWENRNRYWNKLPVMNGIQLLDWIFTAYPDSRNSKE----QTMNID 254

Query: 121 THN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSP 180
             +      ++ P   + +  DAA+     G G G +  D +G  +   M Y        
Sbjct: 255 MKHQQPKKWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMVY-------- 314

Query: 181 LAKTCCLVQIDSKYA 187
             ++CC V++   +A
Sbjct: 315 -HQSCCSVEMAEAWA 315

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BLAST of Lag0022157 vs. NCBI nr
Match: KAF4368373.1 (hypothetical protein F8388_019090 [Cannabis sativa])

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-07
Identity = 44/161 (27.33%), Postives = 76/161 (47.20%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTL-FPRVDEAIQVGNNFADRIIWLARNL 60
           M+++P C++C +Q  T+ H L  C + K I   + + +  E +  G+ F D ++     L
Sbjct: 103 MNVNPSCDLCGNQAETLTHALWCCAKVKPIWKLVPWYKRCEHVNKGSMF-DILVTSKEQL 162

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDYWESTSTKERHHPKTDVIDT 120
             SEFE A    WAIW +RN   +   VM+      WI+  +  +++ + +  K  +   
Sbjct: 163 DKSEFEDAIKIMWAIWENRNRNWNKLPVMNGIQLLEWILSAYPGSNSIDENAMKPTLKPQ 222

Query: 121 HNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKV 158
           H  Q    P   + +  DAA+     G G G +  D +GK+
Sbjct: 223 HLKQWKRPPTGCISVNCDAAMHTGAAGVGTGFIWRDWEGKI 262

[Close]

BLAST of Lag0022157 vs. NCBI nr
Match: XP_030509188.1 (uncharacterized protein LOC115723863 [Cannabis sativa])

HSP 1 Score: 68.2 bits (165), Expect = 1.9e-07
Identity = 48/173 (27.75%), Postives = 77/173 (44.51%), Query Frame = 0


Query: 4    SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSE 63
            SP C+IC S E +I+H L  C RAK + +     +D      +  AD ++ L+  L  SE
Sbjct: 1049 SPHCSICNSAEESINHALFDCPRAKAVWELSSLHIDFHTLRQSASADILLHLSTALSTSE 1108

Query: 64   FEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDY---WESTSTKERH---------H 123
            FE   +  W  W++RN+  H   V   +    +   Y   +++   K             
Sbjct: 1109 FELFLVLCWCNWHERNAIYHGNTVRSSQAVASYAPSYLAEFQNARAKRSQPTPISIAATD 1168

Query: 124  PKTDVIDTHNLQM---PRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAM 162
            P+     TH  +    P+  ++L TDAAI K+    G GA + + DG +  A+
Sbjct: 1169 PRPSSEFTHAPKWTAPPQGRLKLNTDAAIDKARNKVGIGATLRNSDGFIVAAI 1221

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BLAST of Lag0022157 vs. ExPASy TrEMBL
Match: A0A7J6FZV2 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_026124 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-09
Identity = 50/193 (25.91%), Postives = 87/193 (45.08%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVG-NNFADRIIWLARNL 60
           M+++P+C++C     T+ H L  C + K++   L P   +  ++G  +  D +  L   L
Sbjct: 628 MNINPVCDLCGYYAETLPHALWSCDKVKQVW-KLIPWYKQCGKLGEGSMFDMLTALRAKL 687

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIIDYWESTSTKERHHPKTDVIDT 120
             +EFE A    WAIW +RN   +   VM+      W+   +   S+ +    K  +   
Sbjct: 688 SRTEFEDALKIMWAIWENRNRKWNKLHVMNGIQLLDWVFTAYPPASSNQMEEEKKKMASP 747

Query: 121 HN---LQMPRC-SVQLFTDAAIGKSNIGAGYGALILDLDGKVCGA-MEYMDPTPHSPLAK 180
            N    Q P    + +  DAA+  + IG G G +  D  G V  A M Y+  +    +A+
Sbjct: 748 SNPIHWQAPHVGKICVNCDAAMIPNQIGVGIGFIWKDWHGNVLNAGMIYIHSSCSINVAE 807

Query: 181 TCCLVQIDSKYAR 188
           T  +++   K+ R
Sbjct: 808 TWAILEALKKHPR 819

[Close]

BLAST of Lag0022157 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-09
Identity = 47/178 (26.40%), Postives = 73/178 (41.01%), Query Frame = 0


Query: 4    SPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGNNFADRIIWLARNLMNSE 63
            S +C++C+    +I H L  CKRAK++       +D  I   + F D     +      E
Sbjct: 1553 SDICSLCRGNNESIVHALFLCKRAKKVWRGSSFSIDRIIHESSTFKDLFFKASETWPQQE 1612

Query: 64   FEKACITFWAIWNDRNSFCHNCQ----VMDWRDQCGWIIDYWESTST------KERHHPK 123
             E+     W+IW +RN   H  +     M       ++ +Y  S          E H   
Sbjct: 1613 LEQFACILWSIWTERNKEYHGTKPKPHEMLLVSALSYLGEYQTSRQATPTHLRNEVHRNN 1672

Query: 124  TDVIDTHNLQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGKVCGAMEYMDPTPHSP 172
               +    L  P   ++L TDAA+   N  +G+GA++ D DG+V  AM    P    P
Sbjct: 1673 EPTVAPKWLNPPSGRLKLNTDAAVDNVNRISGFGAILRDSDGQVVAAMSKPHPGCFKP 1730

[Close]

BLAST of Lag0022157 vs. ExPASy TrEMBL
Match: A0A7J6I3Y4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000766 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-09
Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNL 60
           MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L
Sbjct: 552 MDVNLNCDLCGHQAETLTHALWGCAKVKTIW-KLVPWYHKCAHFKNGSMFDIMVTLKDHL 611

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-IDYWESTSTKERHHPKTDVID 120
             SEFE+A    WAIW +RN + +   VM+      WI   Y +S + KE+  P    ID
Sbjct: 612 HKSEFEEAIKIMWAIWENRNKYWNKLPVMNGIQLLDWISTAYPDSRNNKEQ--PMN--ID 671

Query: 121 THNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSP 180
             + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y        
Sbjct: 672 MKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMVY-------- 731

Query: 181 LAKTCCLVQIDSKYA 187
             ++CC V++   +A
Sbjct: 732 -HQSCCSVEMAEAWA 732

[Close]

BLAST of Lag0022157 vs. ExPASy TrEMBL
Match: A0A803PR93 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.4e-09
Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNL 60
           MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L
Sbjct: 179 MDVNLNCDLCGHQAETLTHALWGCAKVKTIW-KLVPWYHKCAHFKNGSMFDIMVTLKDHL 238

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWI-IDYWESTSTKERHHPKTDVID 120
             SEFE+A    WAIW +RN + +   VM+      WI   Y +S + KE+  P    ID
Sbjct: 239 HKSEFEEAIKIMWAIWENRNKYWNKLPVMNGIQLLDWISTAYPDSRNNKEQ--PMN--ID 298

Query: 121 THNLQM------PRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSP 180
             + Q+      P  ++ +  DAA+     G G G +  D +G  +   M Y        
Sbjct: 299 MKHQQLKKWIRPPTGNISVNCDAAMNNGTAGVGTGFIWRDYEGNLLLAGMVY-------- 358

Query: 181 LAKTCCLVQIDSKYA 187
             ++CC V++   +A
Sbjct: 359 -HQSCCSVEMAEAWA 359

[Close]

BLAST of Lag0022157 vs. ExPASy TrEMBL
Match: A0A7J6HVA4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-08
Identity = 55/195 (28.21%), Postives = 89/195 (45.64%), Query Frame = 0


Query: 1   MDLSPMCNICKSQEGTIDHTLCGCKRAKRICDTLFPRVDEAIQVGN-NFADRIIWLARNL 60
           MD++  C++C  Q  T+ H L GC + K I   L P   +     N +  D ++ L  +L
Sbjct: 135 MDVNLSCDLCGHQAETLTHALWGCAKVKTIW-KLVPWYHKCAHFKNGSMFDIMVTLKDHL 194

Query: 61  MNSEFEKACITFWAIWNDRNSFCHNCQVMDWRDQCGWIID-YWESTSTKERHHPKTDVID 120
             SEFE+A    WAIW +RN + +   VM+      WI   Y +S ++KE    +T  ID
Sbjct: 195 HKSEFEEAIKIMWAIWENRNRYWNKLPVMNGIQLLDWIFTAYPDSRNSKE----QTMNID 254

Query: 121 THN------LQMPRCSVQLFTDAAIGKSNIGAGYGALILDLDGK-VCGAMEYMDPTPHSP 180
             +      ++ P   + +  DAA+     G G G +  D +G  +   M Y        
Sbjct: 255 MKHQQPKKWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMVY-------- 314

Query: 181 LAKTCCLVQIDSKYA 187
             ++CC V++   +A
Sbjct: 315 -HQSCCSVEMAEAWA 315

The following BLAST results are available for this feature:

BLAST of Lag0022157 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4376283.1	1.0e-08	25.91	hypothetical protein G4B88_008415 [Cannabis sativa] >KAF4376324.1 hypothetical p...	[more]
KAF4401718.1	1.3e-08	28.72	hypothetical protein G4B88_000766 [Cannabis sativa]	[more]
KAF4399153.1	2.3e-08	28.21	hypothetical protein G4B88_023747 [Cannabis sativa]	[more]
KAF4368373.1	1.9e-07	27.33	hypothetical protein F8388_019090 [Cannabis sativa]	[more]
XP_030509188.1	1.9e-07	27.75	uncharacterized protein LOC115723863 [Cannabis sativa]	[more]

BLAST of Lag0022157 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0022157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6FZV2	4.9e-09	25.91	RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_026124 PE=...	[more]
A0A803PJK4	4.9e-09	26.40	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A7J6I3Y4	6.4e-09	28.72	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_000766 PE=4 SV=1	[more]
A0A803PR93	6.4e-09	28.72	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A7J6HVA4	1.1e-08	28.21	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1	[more]

BLAST of Lag0022157 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..374

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022157.1	Lag0022157.1	mRNA