Lag0022148 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022148
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L7a
Location	chr7: 19728400 .. 19730750 (-)
RNA-Seq Expression	Lag0022148
Synteny	Lag0022148

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTCCTCCCTAGTCTGAACTACATTGGTGGAAGGCAAGCTGTTATTCGAGGGATAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGATGTATTCAATGTTGAGGAGTTTTACTATGTTAAGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTATTAACTGATTCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAACTGAACCTCTTGCAATGGAAAGACCAATTTTTTTGGAGTGGCGACCTAGTGCTCAACGAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAATGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGGTCTTCTCTGTCTAGAGAGTCCATTGCTTCGCTGAATATCAATGTCAATGTGGCTGAAGAGGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAATCAGGTTGAGTTTTAGGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGACATCAATTTTTGTAGCACCTATTTCATTTTTTGATGCCAAACCTTCGAGCCAGATCCTTAACAGGGTTAGTACCTTCTTAATGTGTTTGTTATTAAACTTTTGCAGTGTCAATAATTTTAACCCCCCTTTTCATCTTCTCTATGATGCAGTCGTCTACCGACCAAAGCACTTTGGATACAGACATCCCTTATAGATTAGGAGGATTGGCCTTTGCACTAATTCAACTATTGAGTATCATCATCCTGATGTCCAAGGTTGCATGGAAAGTTTTCCCCCTCTTCCTTGTCGTCCTTGCTATCTCTATATGGTATCAGGCAAGAACATAAATCCCACTTTTAGTTTATAATATGCTTTTCATTGTTGCACTAAAAGTATAAAGCTATTATTCCTTGAATTTGCTTATTCGGCAGTATCACATCAATGTGATGTGCATTGAATTTTATGCTGAATACTTTGTTCCAGATTCTTACATACGATCTCCAGCAAGTGGTTCTAGGATTGAGCAAGCCCATTTTCAATTAGAAACTTGATCCGAGGAAACCATATAAATAAGTAATAAGGCAAAATTAGTTTTAACAATAGAAAACAAAAGGTTGAATGATAAGAGTTTGATCCTGATTTGTTTGGTTGTGTATTTAGTTTTGTAATTTAGGGCCATTGTCAGGTAAGGATTGGATTTTCTCCTTGAGGAAAGATAAGATACTTTAAAGACCATTCACCTATACAACATTGTTAGGAAGAGTGGTTTTGAGAACATGTAAGGCCCATGTAATCTACAAAATAATAATTTAGAGTGAAGATAAACCTTAAGACTTGACATGAGGCAGATAAGATAAACCAGGAGCTTCCTCTCTGACTTCTTTAGCTTCTACAGTAATATTGCAGAACTAGACCTTGACTTTGTTGAGTACCATAGAAAGGGATGCTTGCTTGAATTTGTCAAGGTTGCCACAAATCTTTATAAAACCAACTCTTGTCCATTCACATTCTATAATCTTCTATGAAACATTGGGTGTGTATGTATTGACCTACACAAACCAACACTATTCTTTTTTAGGTTTTGAATCTCTTGCCTTTTATTAATTGAAGCAAACAAGTGTAGATAGAAATAAAAGGAAGTTAGTTTTGGGGTCCATTGGAACGGTAAATTGGAGATGGATTTTGTTTGTTTTGTTTCATAAGATGGGAAAACGTTGTGTGATTTGCAAGGGGGTGGGTTGGTTAATTTTATTTTATGGAGCACCTACCTTTGAGAGTTAAAGTGCAAGTATTTCTTTTATTAGCACATCAAAAGATGAGGAGCCTCATGTGTAAGTTATATGCAACTTGAGTAGCTTGAAAACCGTAAAGAAGGAAGATAAGTTGGAGTCCACCAGGATCCTAGAAGCTATCAAAGGTGACCAACACAATTAAAATAAATGTAACACTTGACTAGTACCCTTGTGTAGAGCTTAATTTTAATACCTTTGTTGTCGTGTTCTATTTGTTAAAGTAAACTTAAATGACAAGTATGACGAGTATAGGAAGAAGTGGGGTGACGGAATCATGGGTTCCAAGTTACACGCCAAAACCAAGGCAAAGGAGAAGCTCCTTACCAGTGAAGCTGCTCAAAGGATGTCTTAG

mRNA sequence

ATGGTATTCCTCCCTAGTCTGAACTACATTGGTGGAAGGCAAGCTGTTATTCGAGGGATAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGATGTATTCAATGTTGAGGAGTTTTACTATGTTAAGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTATTAACTGATTCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAACTGAACCTCTTGCAATGGAAAGACCAATTTTTTTGGAGTGGCGACCTAGTGCTCAACGAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAATGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGGTCTTCTCTGTCTAGAGAGTCCATTGCTTCGCTGAATATCAATGTCAATGTGGCTGAAGAGGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAATCAGTCGTCTACCGACCAAAGCACTTTGGATACAGACATCCCTTATAGATTAGGAGGATTGGCCTTTGCACTAATTCAACTATTGAGTATCATCATCCTGATGTCCAAGGTTGCATGGAAAGTTTTCCCCCTCTTCCTTGTCGTCCTTGCTATCTCTATATGCTTGAAAACCGTAAAGAAGGAAGATAAGTTGGAGTCCACCAGGATCCTAGAAGCTATCAAAGTAAACTTAAATGACAAGTATGACGAGTATAGGAAGAAGTGGGGTGACGGAATCATGGGTTCCAAGTTACACGCCAAAACCAAGGCAAAGGAGAAGCTCCTTACCAGTGAAGCTGCTCAAAGGATGTCTTAG

Coding sequence (CDS)

ATGGTATTCCTCCCTAGTCTGAACTACATTGGTGGAAGGCAAGCTGTTATTCGAGGGATAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGATGTATTCAATGTTGAGGAGTTTTACTATGTTAAGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTATTAACTGATTCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAACTGAACCTCTTGCAATGGAAAGACCAATTTTTTTGGAGTGGCGACCTAGTGCTCAACGAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAATGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGGTCTTCTCTGTCTAGAGAGTCCATTGCTTCGCTGAATATCAATGTCAATGTGGCTGAAGAGGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAATCAGTCGTCTACCGACCAAAGCACTTTGGATACAGACATCCCTTATAGATTAGGAGGATTGGCCTTTGCACTAATTCAACTATTGAGTATCATCATCCTGATGTCCAAGGTTGCATGGAAAGTTTTCCCCCTCTTCCTTGTCGTCCTTGCTATCTCTATATGCTTGAAAACCGTAAAGAAGGAAGATAAGTTGGAGTCCACCAGGATCCTAGAAGCTATCAAAGTAAACTTAAATGACAAGTATGACGAGTATAGGAAGAAGTGGGGTGACGGAATCATGGGTTCCAAGTTACACGCCAAAACCAAGGCAAAGGAGAAGCTCCTTACCAGTGAAGCTGCTCAAAGGATGTCTTAG

Protein sequence

MVFLPSLNYIGGRQAVIRGIDCDRVSLIELRMMLTDLDVFNVEEFYYVKPGYTLSTGFKVLLTDSDVVQMVSIVPESRLIHIYVEHNPNIEVLDLTEPLAMERPIFLEWRPSAQRNPVQNQVELDDFVEVEMSGESSLSDSDSARSSLSRESIASLNINVNVAEEDVDSDIGSYSNLHTPIGSDEEEDVRGPEFRAETDMNQSSTDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWKVFPLFLVVLAISICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEAAQRMS

Homology

[Close]

BLAST of Lag0022148 vs. NCBI nr
Match: XP_022157908.1 (60S ribosomal protein L7a-2 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. NCBI nr
Match: XP_022156496.1 (60S ribosomal protein L7a-1 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 195 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 254

Query: 314 AQRMS 319
           AQRMS
Sbjct: 255 AQRMS 259

[Close]

BLAST of Lag0022148 vs. NCBI nr
Match: XP_038876465.1 (60S ribosomal protein L7a-2 isoform X1 [Benincasa hispida])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 232 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 291

Query: 314 AQRMS 319
           AQRMS
Sbjct: 292 AQRMS 296

[Close]

BLAST of Lag0022148 vs. NCBI nr
Match: XP_038876466.1 (60S ribosomal protein L7a-2 isoform X2 [Benincasa hispida])

HSP 1 Score: 104.0 bits (258), Expect = 2.5e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. NCBI nr
Match: XP_038875632.1 (60S ribosomal protein L7a-2-like [Benincasa hispida])

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-18
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDK+E +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot
Match: Q9LZH9 (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-19
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 251 AISICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLT 310
           A ++CL TVK EDKLE ++ILEAIK N NDKY+EYRKKWG GIMGSK  AKTKAKE+++ 
Sbjct: 189 AAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIA 248

Query: 311 SEAAQRMS 319
            EAAQRM+
Sbjct: 249 KEAAQRMN 256

[Close]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot
Match: P49692 (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-19
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 251 AISICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLT 310
           A  +CL TVK EDKLE ++ILEAIK N NDKY+EYRKKWG GIMGSK  AKTKAKE+++ 
Sbjct: 190 ASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIA 249

Query: 311 SEAAQRMS 319
            EAAQRM+
Sbjct: 250 KEAAQRMN 257

[Close]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot
Match: P35685 (60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 47/65 (72.31%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE ++ILEAIK N NDK+DE RKKWG G+MGSK  AKTKA+EKLL  EA
Sbjct: 194 LCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEA 253

Query: 314 AQRMS 319
           AQRM+
Sbjct: 254 AQRMT 258

[Close]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot
Match: P0DKK7 (60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 47/65 (72.31%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE ++ILEAIK N NDK+DE RKKWG G+MGSK  AKTKA+EKLL  EA
Sbjct: 194 LCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEA 253

Query: 314 AQRMS 319
           AQRM+
Sbjct: 254 AQRMT 258

[Close]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot
Match: Q9LK64 (ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 200  MNQSSTDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWKVFPLFLVVLAISICLKTV 259
            M+++STDQS +D ++PY+ G +A  +IQL+ II +MS+V+W VF +F+ V+A SI  +  
Sbjct: 1048 MSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRY 1107

Query: 260  KKEDKLESTRILEAIKVNLNDKYDE 285
                  E +R++   K  L   + E
Sbjct: 1108 YIAAARELSRLVGVCKAPLIQHFSE 1132

[Close]

BLAST of Lag0022148 vs. ExPASy TrEMBL
Match: A0A6J1DUM7 (60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111024515 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. ExPASy TrEMBL
Match: A0A6J1DV46 (60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111023378 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-18
Identity = 53/65 (81.54%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDKLE +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 195 LCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 254

Query: 314 AQRMS 319
           AQRMS
Sbjct: 255 AQRMS 259

[Close]

BLAST of Lag0022148 vs. ExPASy TrEMBL
Match: A0A5D3DB00 (60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001180 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDK+E +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. ExPASy TrEMBL
Match: A0A0A0KPQ6 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDK+E +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. ExPASy TrEMBL
Match: A0A0A0LBU9 (60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-18
Identity = 52/65 (80.00%), Postives = 55/65 (84.62%), Query Frame = 0


Query: 254 ICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLTSEA 313
           +CL TVK EDK+E +RILEAIK N NDKYDEYRKKWG GIMGSK  AKTKAKEKLL  EA
Sbjct: 193 LCLTTVKNEDKMEFSRILEAIKANFNDKYDEYRKKWGGGIMGSKSQAKTKAKEKLLAKEA 252

Query: 314 AQRMS 319
           AQRMS
Sbjct: 253 AQRMS 257

[Close]

BLAST of Lag0022148 vs. TAIR 10
Match: AT3G62870.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 98.6 bits (244), Expect = 9.6e-21
Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 251 AISICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLT 310
           A ++CL TVK EDKLE ++ILEAIK N NDKY+EYRKKWG GIMGSK  AKTKAKE+++ 
Sbjct: 189 AAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIA 248

Query: 311 SEAAQRMS 319
            EAAQRM+
Sbjct: 249 KEAAQRMN 256

[Close]

BLAST of Lag0022148 vs. TAIR 10
Match: AT2G47610.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.1e-20
Identity = 48/68 (70.59%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 251 AISICLKTVKKEDKLESTRILEAIKVNLNDKYDEYRKKWGDGIMGSKLHAKTKAKEKLLT 310
           A  +CL TVK EDKLE ++ILEAIK N NDKY+EYRKKWG GIMGSK  AKTKAKE+++ 
Sbjct: 190 ASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQAKTKAKERVIA 249

Query: 311 SEAAQRMS 319
            EAAQRM+
Sbjct: 250 KEAAQRMN 257

[Close]

BLAST of Lag0022148 vs. TAIR 10
Match: AT3G13080.2 (multidrug resistance-associated protein 3 )

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-07
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 200  MNQSSTDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWKVFPLFLVVLAISICLKTV 259
            M+++STDQS +D ++PY+ G +A  +IQL+ II +MS+V+W VF +F+ V+A SI  +  
Sbjct: 1048 MSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRY 1107

Query: 260  KKEDKLESTRILEAIKVNLNDKYDE 285
                  E +R++   K  L   + E
Sbjct: 1108 YIAAARELSRLVGVCKAPLIQHFSE 1132

[Close]

BLAST of Lag0022148 vs. TAIR 10
Match: AT3G13080.1 (multidrug resistance-associated protein 3 )

HSP 1 Score: 53.9 bits (128), Expect = 2.7e-07
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 200  MNQSSTDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWKVFPLFLVVLAISICLKTV 259
            M+++STDQS +D ++PY+ G +A  +IQL+ II +MS+V+W VF +F+ V+A SI  +  
Sbjct: 1048 MSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASIWYQRY 1107

Query: 260  KKEDKLESTRILEAIKVNLNDKYDE 285
                  E +R++   K  L   + E
Sbjct: 1108 YIAAARELSRLVGVCKAPLIQHFSE 1132

[Close]

BLAST of Lag0022148 vs. TAIR 10
Match: AT3G13080.3 (multidrug resistance-associated protein 3 )

HSP 1 Score: 53.1 bits (126), Expect = 4.6e-07
Identity = 27/55 (49.09%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 200  MNQSSTDQSTLDTDIPYRLGGLAFALIQLLSIIILMSKVAWKVFPLFLVVLAISI 255
            M+++STDQS +D ++PY+ G +A  +IQL+ II +MS+V+W VF +F+ V+A SI
Sbjct: 1048 MSRASTDQSAVDLELPYQFGSVAITVIQLIGIIGVMSQVSWLVFLVFIPVVAASI 1102

The following BLAST results are available for this feature:

BLAST of Lag0022148 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157908.1	2.5e-18	81.54	60S ribosomal protein L7a-2 [Momordica charantia]	[more]
XP_022156496.1	2.5e-18	81.54	60S ribosomal protein L7a-1 [Momordica charantia]	[more]
XP_038876465.1	2.5e-18	81.54	60S ribosomal protein L7a-2 isoform X1 [Benincasa hispida]	[more]
XP_038876466.1	2.5e-18	81.54	60S ribosomal protein L7a-2 isoform X2 [Benincasa hispida]	[more]
XP_038875632.1	4.2e-18	80.00	60S ribosomal protein L7a-2-like [Benincasa hispida]	[more]

BLAST of Lag0022148 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZH9	1.4e-19	70.59	60S ribosomal protein L7a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7AB PE=1 SV=1	[more]
P49692	3.0e-19	70.59	60S ribosomal protein L7a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL7AA PE=2 SV=2	[more]
P35685	1.1e-18	72.31	60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-1 ...	[more]
P0DKK7	1.1e-18	72.31	60S ribosomal protein L7a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL7A-2 ...	[more]
Q9LK64	3.8e-06	37.65	ABC transporter C family member 3 OS=Arabidopsis thaliana OX=3702 GN=ABCC3 PE=1 ...	[more]

BLAST of Lag0022148 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUM7	1.2e-18	81.54	60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111024515 PE=3 SV...	[more]
A0A6J1DV46	1.2e-18	81.54	60S ribosomal protein L7a OS=Momordica charantia OX=3673 GN=LOC111023378 PE=3 SV...	[more]
A0A5D3DB00	2.0e-18	80.00	60S ribosomal protein L7a OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KPQ6	2.0e-18	80.00	60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_5G171740 PE=3 SV=1	[more]
A0A0A0LBU9	2.0e-18	80.00	60S ribosomal protein L7a OS=Cucumis sativus OX=3659 GN=Csa_3G563300 PE=3 SV=1	[more]

BLAST of Lag0022148 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62870.1	9.6e-21	70.59	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT2G47610.1	2.1e-20	70.59	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G13080.2	2.7e-07	37.65	multidrug resistance-associated protein 3	[more]
AT3G13080.1	2.7e-07	37.65	multidrug resistance-associated protein 3	[more]
AT3G13080.3	4.6e-07	49.09	multidrug resistance-associated protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001921	Ribosomal protein L7A/L8	PRINTS	PR00882	RIBOSOMALL7A	coord: 277..297 score: 60.61 coord: 245..269 score: 24.73
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 245..311 e-value: 1.4E-10 score: 43.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..191
None	No IPR available	PANTHER	PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	coord: 200..256
None	No IPR available	PANTHER	PTHR24223:SF222	OS01G0902100 PROTEIN	coord: 200..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022148.1	Lag0022148.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding