Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGAAGAAAGTTCGTCCTCCTCCACTGCTCCGGCGATTACTCCGGTGATAACCCCAAACACACCTACCACCACCCCCGTTGTTACTCCAATTCAAAACCAGAATCTTCGCCCTTCGTTTAATCAACCCACCTCTGGCACCAACTTGAGAGGTAAAACACCAATCCAGAATAATCCATCATTTCCTTCTTTTAACCCTCAACCTAGTTTCCCAAACTTCCAGTACCCTCAGAACCCCCCCTTTCAAACCCAAGGCGTTTATCCTCGACCTCTGTTTCAAGCTCCCAATCAATCATTTCCAGCTCCTCAACAATTTCCAACTCCCCAATTTCAACCTACCCAAAATTTCTTTTTCCCAAATCCCTATCCAACTCTACCCCAACCTCTTTCGGTCAAGCTCACCGACAATAATTTCCTATTCTGGAAGAATCAGTTGCTCCATGCGGTAATGGCTAATGGACTCTCTGGCTTTCTCGATGGAACGATCTCAGCTCTACCAAAATTTCTTGATGCAAATCAAACTCAGGTTAATCCGGATTATATCGGCTGGGAAAGGTACAATAGGTTTATTATGTGCTGGATTTACTCATCCTTGTCTCAGGAGAAAATGGGTGAGATTGTTAATCTAGATACTGCTTTTGATATTTGGAATTCTCTGAAGCGTGCATATGACTCTAATACTACTGCTCGGATTATGGGATTGAAAACTCAGTTGCAAAGACTTAGGAAGGATAATTTGTCTGTCAGTCAGTATTTAGCTAAAATTAAAGAGGTCACGAATAAATTCTCAGCCATTGGTGAACCAATCTCCTACCGCGATCATTTAGCTCACATATTAGATGGTCTAGGTAGTGAGTATAATGCCTTCGTCACTTCTATACAGAACTGTCCGGATAATCCATCTCTTGAAGATATTCGAAGCTTGTTGTTAGCTTATGAAGCTAGGCTAGAAAAACAGAATTCTGTGGATCAATTAAATGTTGTTCAGGCTAATATTAGTTCTCTCAACTCTCAGCATGTTAATCACCATTTTTCTAATAGGTATCCACCATCCTTTTCCCCTATTCCTCGACCACAATTTCCCTCCCCTACAATACCTTCGTACCAAGGTTGCACTGGTATTCCCTGTAAGGAAAATGCGTAA
mRNA sequence
ATGAATATTGAAGAAAGTTCGTCCTCCTCCACTGCTCCGGCGATTACTCCGGTGATAACCCCAAACACACCTACCACCACCCCCGTTGTTACTCCAATTCAAAACCAGAATCTTCGCCCTTCGTTTAATCAACCCACCTCTGGCACCAACTTGAGAGGTAAAACACCAATCCAGAATAATCCATCATTTCCTTCTTTTAACCCTCAACCTAGTTTCCCAAACTTCCAGTACCCTCAGAACCCCCCCTTTCAAACCCAAGGCGTTTATCCTCGACCTCTGTTTCAAGCTCCCAATCAATCATTTCCAGCTCCTCAACAATTTCCAACTCCCCAATTTCAACCTACCCAAAATTTCTTTTTCCCAAATCCCTATCCAACTCTACCCCAACCTCTTTCGGTCAAGCTCACCGACAATAATTTCCTATTCTGGAAGAATCAGTTGCTCCATGCGGTAATGGCTAATGGACTCTCTGGCTTTCTCGATGGAACGATCTCAGCTCTACCAAAATTTCTTGATGCAAATCAAACTCAGGTTAATCCGGATTATATCGGCTGGGAAAGGTACAATAGGTTTATTATGTGCTGGATTTACTCATCCTTGTCTCAGGAGAAAATGGGTGAGATTGTTAATCTAGATACTGCTTTTGATATTTGGAATTCTCTGAAGCGTGCATATGACTCTAATACTACTGCTCGGATTATGGGATTGAAAACTCAGTTGCAAAGACTTAGGAAGGATAATTTGTCTGTCAGTCAGTATTTAGCTAAAATTAAAGAGGTCACGAATAAATTCTCAGCCATTGGTGAACCAATCTCCTACCGCGATCATTTAGCTCACATATTAGATGGTCTAGGTAGTGAGTATAATGCCTTCGTCACTTCTATACAGAACTGTCCGGATAATCCATCTCTTGAAGATATTCGAAGCTTGTTGTTAGCTTATGAAGCTAGGCTAGAAAAACAGAATTCTGTGGATCAATTAAATGTTGTTCAGGCTAATATTAGTTCTCTCAACTCTCAGCATGTTAATCACCATTTTTCTAATAGGTATCCACCATCCTTTTCCCCTATTCCTCGACCACAATTTCCCTCCCCTACAATACCTTCGTACCAAGGTTGCACTGGTATTCCCTGTAAGGAAAATGCGTAA
Coding sequence (CDS)
ATGAATATTGAAGAAAGTTCGTCCTCCTCCACTGCTCCGGCGATTACTCCGGTGATAACCCCAAACACACCTACCACCACCCCCGTTGTTACTCCAATTCAAAACCAGAATCTTCGCCCTTCGTTTAATCAACCCACCTCTGGCACCAACTTGAGAGGTAAAACACCAATCCAGAATAATCCATCATTTCCTTCTTTTAACCCTCAACCTAGTTTCCCAAACTTCCAGTACCCTCAGAACCCCCCCTTTCAAACCCAAGGCGTTTATCCTCGACCTCTGTTTCAAGCTCCCAATCAATCATTTCCAGCTCCTCAACAATTTCCAACTCCCCAATTTCAACCTACCCAAAATTTCTTTTTCCCAAATCCCTATCCAACTCTACCCCAACCTCTTTCGGTCAAGCTCACCGACAATAATTTCCTATTCTGGAAGAATCAGTTGCTCCATGCGGTAATGGCTAATGGACTCTCTGGCTTTCTCGATGGAACGATCTCAGCTCTACCAAAATTTCTTGATGCAAATCAAACTCAGGTTAATCCGGATTATATCGGCTGGGAAAGGTACAATAGGTTTATTATGTGCTGGATTTACTCATCCTTGTCTCAGGAGAAAATGGGTGAGATTGTTAATCTAGATACTGCTTTTGATATTTGGAATTCTCTGAAGCGTGCATATGACTCTAATACTACTGCTCGGATTATGGGATTGAAAACTCAGTTGCAAAGACTTAGGAAGGATAATTTGTCTGTCAGTCAGTATTTAGCTAAAATTAAAGAGGTCACGAATAAATTCTCAGCCATTGGTGAACCAATCTCCTACCGCGATCATTTAGCTCACATATTAGATGGTCTAGGTAGTGAGTATAATGCCTTCGTCACTTCTATACAGAACTGTCCGGATAATCCATCTCTTGAAGATATTCGAAGCTTGTTGTTAGCTTATGAAGCTAGGCTAGAAAAACAGAATTCTGTGGATCAATTAAATGTTGTTCAGGCTAATATTAGTTCTCTCAACTCTCAGCATGTTAATCACCATTTTTCTAATAGGTATCCACCATCCTTTTCCCCTATTCCTCGACCACAATTTCCCTCCCCTACAATACCTTCGTACCAAGGTTGCACTGGTATTCCCTGTAAGGAAAATGCGTAA
Protein sequence
MNIEESSSSSTAPAITPVITPNTPTTTPVVTPIQNQNLRPSFNQPTSGTNLRGKTPIQNNPSFPSFNPQPSFPNFQYPQNPPFQTQGVYPRPLFQAPNQSFPAPQQFPTPQFQPTQNFFFPNPYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNHHFSNRYPPSFSPIPRPQFPSPTIPSYQGCTGIPCKENA
Homology
BLAST of Lag0022137 vs. NCBI nr
Match:
XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])
HSP 1 Score: 355.1 bits (910), Expect = 7.3e-94
Identity = 178/250 (71.20%), Postives = 206/250 (82.40%), Query Frame = 0
Query: 108 PTPQF--QPTQNFFFPNPYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTIS 167
PTP F QP N F NP+PTLPQPL+VKL DNNFL WKNQLL+AV+ANGL G+LDGTI
Sbjct: 6 PTPNFLAQP-PNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIM 65
Query: 168 ALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAY 227
P+FLD +Q Q NP Y WERYNR +MCWIYSSLS+EKMGE+V+L+T DIW+SL R Y
Sbjct: 66 PPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVY 125
Query: 228 DSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLG 287
DS TTARIMGLKT+LQ LRKD SVSQYLAKIKE+ +KF+A+GEP+SYRDHLAH+LDGLG
Sbjct: 126 DSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLG 185
Query: 288 SEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNHH 347
SEYNAFVTSI N D+PSLED+RSLLLAYEARL+KQN+VDQLN+ QAN+ +L+ Q H
Sbjct: 186 SEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQ----H 245
Query: 348 FSNRYPPSFS 356
S R PP FS
Sbjct: 246 NSKRPPPKFS 250
BLAST of Lag0022137 vs. NCBI nr
Match:
PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])
HSP 1 Score: 223.4 bits (568), Expect = 3.3e-54
Identity = 121/265 (45.66%), Postives = 169/265 (63.77%), Query Frame = 0
Query: 92 PLFQAPNQSFPAPQQFPTPQFQPTQNFFFPNP-YPTLPQPLSVKLTDNNFLFWKNQLLHA 151
P Q P + P Q Q Q P P P++ QP ++KL +N+L WKNQLL+
Sbjct: 16 PTIQMPPTNIPNVQD----QIIGAQPPLPPLPILPSMNQPFTIKLDADNYLIWKNQLLNV 75
Query: 152 VMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIVN 211
++ANGL F+DG+ P+F D + VN +YI W+R+NR IM WIY+SL+Q MG+IV
Sbjct: 76 IIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIVG 135
Query: 212 LDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEP 271
+AF+IW +L + Y S++ A+I L+ +LQ LRKD L+ +Y+ K K + N +A+GEP
Sbjct: 136 YASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGEP 195
Query: 272 ISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVDQLNVV 331
+S +DHL ++ GL EYNAFVTSI PDN LE+I SLLL+YE RLE QN+ QL+ +
Sbjct: 196 VSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQLSSL 255
Query: 332 QANISSLNSQHVNHHFSNRYPPSFS 356
QAN++ LN +N Y P+FS
Sbjct: 256 QANLAHLN---IN---KKPYRPNFS 270
BLAST of Lag0022137 vs. NCBI nr
Match:
GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])
HSP 1 Score: 213.8 bits (543), Expect = 2.6e-51
Identity = 103/236 (43.64%), Postives = 153/236 (64.83%), Query Frame = 0
Query: 102 PAPQQFPTPQFQPTQNFFFPNP------------YPTLPQPLSVKLTDNNFLFWKNQLLH 161
PAP P P P + PNP P++ QPL+VKL D+N++ WK QLL+
Sbjct: 13 PAP---PPPTSNPLPSSSIPNPNPQILNTSPLPNMPSINQPLAVKLDDHNYIIWKEQLLN 72
Query: 162 AVMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIV 221
V+ANGL FLDG+ P+FLD Q Q NP++ W+RYNR +M WIY+S+++ +G+IV
Sbjct: 73 IVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIV 132
Query: 222 NLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGE 281
+A IW +L+R Y + + A + L+T LQ ++K+ L+ Y+ K + + N ++IGE
Sbjct: 133 GYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGE 192
Query: 282 PISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVD 326
P++Y DHL + L GLG +YN FVTSIQ+ PS+E++ SLLL+Y+ARLE+Q++ D
Sbjct: 193 PVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQSATD 245
BLAST of Lag0022137 vs. NCBI nr
Match:
RVW69807.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 210.3 bits (534), Expect = 2.9e-50
Identity = 103/211 (48.82%), Postives = 147/211 (69.67%), Query Frame = 0
Query: 123 PYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDY 182
P P+L Q LS+KL + N L K+QLL+ ++ANGL F+D S+ PK+LDA QVNP++
Sbjct: 32 PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91
Query: 183 IGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQR 242
+ W+R N+ +M WIYSSL+ +G+IV TA DIW SL Y+S + A +M L +QLQR
Sbjct: 92 VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151
Query: 243 LRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNP 302
++K ++ +S+YL+++K V ++F+ IGEP+SYRD L IL+GL EY+ FVTSI N D P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211
Query: 303 SLEDIRSLLLAYEARLEKQNSVDQLNVVQAN 334
SL+++ SLL YE RL +++ LN QAN
Sbjct: 212 SLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN 242
BLAST of Lag0022137 vs. NCBI nr
Match:
RVX14312.1 (Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera])
HSP 1 Score: 193.0 bits (489), Expect = 4.8e-45
Identity = 98/244 (40.16%), Postives = 158/244 (64.75%), Query Frame = 0
Query: 119 FFPNPYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQV 178
F + P+L Q +V L +N+L W+ Q+L+ ++ANGL + G I A +FL + +
Sbjct: 17 FAHHTMPSLNQAFTVGLDQSNYLLWRTQMLNIIIANGLEEMIHGKIPAPSRFL-GDSENI 76
Query: 179 NPDYIGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKT 238
NP+Y W+R NR +MCWIYSSL++ M +I+ LDTA +IW +L++ + + + ARIM L+
Sbjct: 77 NPEYSIWQRQNRLVMCWIYSSLTEGVMAQIIGLDTASEIWTALEKIFSAASKARIMQLRF 136
Query: 239 QLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNC 298
QLQ +K LS+ +YL KIK + + AIGE I+ +D + ++L GLG+EYN+FV ++ +
Sbjct: 137 QLQTTKKRGLSMMEYLLKIKSIVDNLLAIGENITEQDRILYLLAGLGAEYNSFVITVTSG 196
Query: 299 PDNPSLEDIRSLLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNHHFSNRYPPSFSPIP 358
+ SLE+I S+LL +E +LE+Q+ ++ N++QANI+++N Q H+ N+ F
Sbjct: 197 HEPLSLEEIHSMLLTHENQLEQQHITEETNLLQANITTMNIQ--GHNKKNQKSSQFKTQG 256
Query: 359 RPQF 363
R F
Sbjct: 257 RGSF 257
BLAST of Lag0022137 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 9.5e-20
Identity = 55/222 (24.77%), Postives = 109/222 (49.10%), Query Frame = 0
Query: 134 KLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQT-QVNPDYIGWERYNRFI 193
KLT N+L W Q+ L+GFLDG+ + P + + +VNPDY W+R ++ I
Sbjct: 25 KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84
Query: 194 MCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQ 253
+ ++S + TA IW +L++ Y + + + L+TQL++ K ++
Sbjct: 85 YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144
Query: 254 YLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLL 313
Y+ + ++ + +G+P+ + + + +L+ L EY + I P+L +I LL
Sbjct: 145 YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204
Query: 314 AYEARLEKQNSVDQLNVVQANISSLNSQHVNH----HFSNRY 351
+E+++ +S + + +S N+ N+ + +NRY
Sbjct: 205 NHESKILAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRY 246
BLAST of Lag0022137 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 55.5 bits (132), Expect = 1.6e-06
Identity = 50/209 (23.92%), Postives = 82/209 (39.23%), Query Frame = 0
Query: 137 DNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWI 196
DN F W+ ++ ++ GL LD S P + A W + I
Sbjct: 14 DNGFSTWQRRMRDLLIQQGLHKVLD-VDSKKPDTMKAED---------WADLDERAASAI 73
Query: 197 YSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLR-KDNLSVSQYLA 256
LS + + I++ DTA IW L+ Y S T + LK QL L + + +L
Sbjct: 74 RLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLN 133
Query: 257 KIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYE 316
+ + + +G I D +L+ L S Y+ T+I + L+D+ S LL E
Sbjct: 134 VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNE 193
Query: 317 ARLEKQNSVDQLNVVQANISSLNSQHVNH 345
+K + Q + + S N+
Sbjct: 194 KMRKKPENQGQALITEGRGRSYQRSSNNY 212
BLAST of Lag0022137 vs. ExPASy TrEMBL
Match:
A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)
HSP 1 Score: 355.1 bits (910), Expect = 3.6e-94
Identity = 178/250 (71.20%), Postives = 206/250 (82.40%), Query Frame = 0
Query: 108 PTPQF--QPTQNFFFPNPYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTIS 167
PTP F QP N F NP+PTLPQPL+VKL DNNFL WKNQLL+AV+ANGL G+LDGTI
Sbjct: 6 PTPNFLAQP-PNPFSANPFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIM 65
Query: 168 ALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAY 227
P+FLD +Q Q NP Y WERYNR +MCWIYSSLS+EKMGE+V+L+T DIW+SL R Y
Sbjct: 66 PPPQFLDHHQLQPNPAYYAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVY 125
Query: 228 DSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLG 287
DS TTARIMGLKT+LQ LRKD SVSQYLAKIKE+ +KF+A+GEP+SYRDHLAH+LDGLG
Sbjct: 126 DSKTTARIMGLKTELQNLRKDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLG 185
Query: 288 SEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNHH 347
SEYNAFVTSI N D+PSLED+RSLLLAYEARL+KQN+VDQLN+ QAN+ +L+ Q H
Sbjct: 186 SEYNAFVTSIHNRADSPSLEDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQ----H 245
Query: 348 FSNRYPPSFS 356
S R PP FS
Sbjct: 246 NSKRPPPKFS 250
BLAST of Lag0022137 vs. ExPASy TrEMBL
Match:
A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)
HSP 1 Score: 223.4 bits (568), Expect = 1.6e-54
Identity = 121/265 (45.66%), Postives = 169/265 (63.77%), Query Frame = 0
Query: 92 PLFQAPNQSFPAPQQFPTPQFQPTQNFFFPNP-YPTLPQPLSVKLTDNNFLFWKNQLLHA 151
P Q P + P Q Q Q P P P++ QP ++KL +N+L WKNQLL+
Sbjct: 16 PTIQMPPTNIPNVQD----QIIGAQPPLPPLPILPSMNQPFTIKLDADNYLIWKNQLLNV 75
Query: 152 VMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIVN 211
++ANGL F+DG+ P+F D + VN +YI W+R+NR IM WIY+SL+Q MG+IV
Sbjct: 76 IIANGLEDFIDGSRPCPPRFTDPARQIVNAEYIAWQRFNRLIMSWIYASLTQGVMGQIVG 135
Query: 212 LDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGEP 271
+AF+IW +L + Y S++ A+I L+ +LQ LRKD L+ +Y+ K K + N +A+GEP
Sbjct: 136 YASAFEIWEALNQIYTSSSLAKITELRAKLQNLRKDGLTAIEYIQKHKNICNTLAAVGEP 195
Query: 272 ISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVDQLNVV 331
+S +DHL ++ GL EYNAFVTSI PDN LE+I SLLL+YE RLE QN+ QL+ +
Sbjct: 196 VSCKDHLLYLFGGLDREYNAFVTSITKRPDNLPLEEIYSLLLSYEFRLESQNASAQLSSL 255
Query: 332 QANISSLNSQHVNHHFSNRYPPSFS 356
QAN++ LN +N Y P+FS
Sbjct: 256 QANLAHLN---IN---KKPYRPNFS 270
BLAST of Lag0022137 vs. ExPASy TrEMBL
Match:
A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 103/236 (43.64%), Postives = 153/236 (64.83%), Query Frame = 0
Query: 102 PAPQQFPTPQFQPTQNFFFPNP------------YPTLPQPLSVKLTDNNFLFWKNQLLH 161
PAP P P P + PNP P++ QPL+VKL D+N++ WK QLL+
Sbjct: 13 PAP---PPPTSNPLPSSSIPNPNPQILNTSPLPNMPSINQPLAVKLDDHNYIIWKEQLLN 72
Query: 162 AVMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNRFIMCWIYSSLSQEKMGEIV 221
V+ANGL FLDG+ P+FLD Q Q NP++ W+RYNR +M WIY+S+++ +G+IV
Sbjct: 73 IVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYASINESMLGQIV 132
Query: 222 NLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLSVSQYLAKIKEVTNKFSAIGE 281
+A IW +L+R Y + + A + L+T LQ ++K+ L+ Y+ K + + N ++IGE
Sbjct: 133 GYTSASQIWEALERLYAAASFAHLTELRTALQTIKKEGLTALAYIQKFRHLCNSLASIGE 192
Query: 282 PISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRSLLLAYEARLEKQNSVD 326
P++Y DHL + L GLG +YN FVTSIQ+ PS+E++ SLLL+Y+ARLE+Q++ D
Sbjct: 193 PVTYTDHLIYFLGGLGRDYNPFVTSIQSQAIRPSIEEVHSLLLSYDARLERQSATD 245
BLAST of Lag0022137 vs. ExPASy TrEMBL
Match:
A0A438GC62 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_210 PE=4 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 1.4e-50
Identity = 103/211 (48.82%), Postives = 147/211 (69.67%), Query Frame = 0
Query: 123 PYPTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDY 182
P P+L Q LS+KL + N L K+QLL+ ++ANGL F+D S+ PK+LDA QVNP++
Sbjct: 32 PSPSLSQSLSIKLDETNLLLRKSQLLNVIIANGLEDFIDPDQSSPPKYLDAACRQVNPEF 91
Query: 183 IGWERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQR 242
+ W+R N+ +M WIYSSL+ +G+IV TA DIW SL Y+S + A +M L +QLQR
Sbjct: 92 VQWDRLNQLVMSWIYSSLTPGMVGQIVEYSTARDIWASLNDEYESPSIATVMSLNSQLQR 151
Query: 243 LRKDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNP 302
++K ++ +S+YL+++K V ++F+ IGEP+SYRD L IL+GL EY+ FVTSI N D P
Sbjct: 152 IKKIDIPLSEYLSRLKFVFDEFATIGEPLSYRDKLTRILEGLPEEYDNFVTSIHNRSDRP 211
Query: 303 SLEDIRSLLLAYEARLEKQNSVDQLNVVQAN 334
SL+++ SLL YE RL +++ LN QAN
Sbjct: 212 SLQEVHSLLHTYEYRLSQRSMDQNLNFPQAN 242
BLAST of Lag0022137 vs. ExPASy TrEMBL
Match:
A0A803NL56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 2.4e-50
Identity = 120/315 (38.10%), Postives = 182/315 (57.78%), Query Frame = 0
Query: 65 SFNPQPSFPNFQYPQNPPFQTQGVYPRPLFQAPNQSFPAPQQFPTPQFQPTQNFFFPNPY 124
S PQ N Q P P T P P + + P PN +
Sbjct: 8 SSTPQMEDENIQNPIQNPTITNTQNPNTTAAPPISASSSSPSLP------------PN-F 67
Query: 125 PTLPQPLSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDYIG 184
+ Q +SVKL D N+L W+ Q+ + ++ANGL G++DGT++ +F ++ +QV+P +
Sbjct: 68 SSFNQTISVKLDDTNYLVWRMQMQNIIIANGLEGYIDGTVACSAQFPNSTSSQVDPAFTT 127
Query: 185 WERYNRFIMCWIYSSLSQEKMGEIVNLDTAFDIWNSLKRAYDSNTTARIMGLKTQLQRLR 244
W RYN+ +M W+Y+SLS +G+IV TA +IW SL+R Y + + AR + LQ L+
Sbjct: 128 WHRYNQLLMSWLYASLSDSMLGQIVGFTTATEIWVSLERTYSATSFARSFDFRMALQNLK 187
Query: 245 KDNLSVSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSL 304
KD L+ S YL K+K + N +++G+PIS ++HL ++L+GLG EYNAFVT I P P++
Sbjct: 188 KDRLNASAYLQKLKTLCNTLASVGDPISSQEHLTYLLNGLGLEYNAFVTPILARPVKPTI 247
Query: 305 EDIRSLLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNHHFSNRYPPSFS--PIPRPQF 364
E++ +LLL+YEARLE+QN+ + +QAN ++L+ F + P S S P +P+F
Sbjct: 248 EEVHALLLSYEARLERQNAAASPSSLQANFANLS-------FPKQRPKSSSQQPSSQPRF 302
Query: 365 PS-------PTIPSY 371
PS PTIPS+
Sbjct: 308 PSHPQQNCPPTIPSF 302
BLAST of Lag0022137 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 86.7 bits (213), Expect = 4.5e-17
Identity = 55/215 (25.58%), Postives = 104/215 (48.37%), Query Frame = 0
Query: 131 LSVKLTDNNFLFWKNQLLHAVMANGLSGFLDGTISALPKFLDANQTQVNPDYIGWERYNR 190
+++ L N+ W+ ++ G+ G +DG+ + P T+ W+ +
Sbjct: 24 VTLDLNKLNYDVWRELFETLCLSFGVLGHIDGSSTPTP------MTEKR-----WKERDG 83
Query: 191 FIMCWIYSSLSQEKMGEIVNLD-TAFDIWNSLKRAYDSNTTARIMGLKTQLQRLRKDNLS 250
+ WIY +++ + I+ + TA D+W SL+ + N AR + + +L+ D+LS
Sbjct: 84 LVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLS 143
Query: 251 VSQYLAKIKEVTNKFSAIGEPISYRDHLAHILDGLGSEYNAFVTSIQNCPDNPSLEDIRS 310
V +Y K+K +++ + + PIS R + H+L+GL +Y+ + I++ PS + RS
Sbjct: 144 VHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARS 203
Query: 311 LLLAYEARLEKQNSVDQLNVVQANISSLNSQHVNH 345
+LL E+RL +N S + H NH
Sbjct: 204 MLLMEESRL-------------SNKSKSSLSHTNH 214
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155181.1 | 7.3e-94 | 71.20 | uncharacterized protein LOC111022315 [Momordica charantia] | [more] |
PON47862.1 | 3.3e-54 | 45.66 | hypothetical protein TorRG33x02_321990 [Trema orientale] | [more] |
GFY85402.1 | 2.6e-51 | 43.64 | hypothetical protein Acr_04g0001400 [Actinidia rufa] | [more] |
RVW69807.1 | 2.9e-50 | 48.82 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
RVX14312.1 | 4.8e-45 | 40.16 | Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 9.5e-20 | 24.77 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P10978 | 1.6e-06 | 23.92 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DQX7 | 3.6e-94 | 71.20 | uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A2P5BGF8 | 1.6e-54 | 45.66 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV... | [more] |
A0A7J0EGI5 | 1.3e-51 | 43.64 | Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1 | [more] |
A0A438GC62 | 1.4e-50 | 48.82 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
A0A803NL56 | 2.4e-50 | 38.10 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 4.5e-17 | 25.58 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |