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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTCAACATGGAGCACATCAAGATGGTTGATGACGAGGACTCTTCAACAATTATCCTTGGGAAGGTGCGCGTTTGAATTGTTGTTAGGATTCATGCACAAAGCCTTAGTTAGTAAAGGCGCTACTGGTATCATGATGGGTGAGTTCATATTCCCTTATTTGCTGGGCATACGAGGTCATCCCGACCCTAAGTTCAACAAGATTTTTTTACCCGGAAGTGTCTACGTGCATACCGAGAATAATCAACTGGGTTGTAGACACGCAACCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGGTAATATCTACATATCCATCTCATCCTTTTTACTAAACAATGTTGACTGACTGTAGTGTGTAAAAACTTTGAACACATAGTTAGAGGTAAGCCCTTGCTTGCAACTAATGAAGAGATCGCTATGGACTACTTCCAACCATTTGTTGATGGAGACGACCTTAAGACGTGA mRNA sequence ATGTCAACATGGAGCACATCAAGATGGTTGATGACGAGGACTCTTCAACAATTATCCTTGGGAAGGTGCGCGTTTGAATTGTTGTTAGGATTCATGCACAAAGCCTTAGTTAGTAAAGGCGCTACTGGTATCATGATGGGTGAGTTCATATTCCCTTATTTGCTGGGCATACGAGGTCATCCCGACCCTAAGTTCAACAAGATTTTTTTACCCGGAAGTGTCTACGTGCATACCGAGAATAATCAACTGGGTTGTAGACACGCAACCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGTTAGAGGTAAGCCCTTGCTTGCAACTAATGAAGAGATCGCTATGGACTACTTCCAACCATTTGTTGATGGAGACGACCTTAAGACGTGA Coding sequence (CDS) ATGTCAACATGGAGCACATCAAGATGGTTGATGACGAGGACTCTTCAACAATTATCCTTGGGAAGGTGCGCGTTTGAATTGTTGTTAGGATTCATGCACAAAGCCTTAGTTAGTAAAGGCGCTACTGGTATCATGATGGGTGAGTTCATATTCCCTTATTTGCTGGGCATACGAGGTCATCCCGACCCTAAGTTCAACAAGATTTTTTTACCCGGAAGTGTCTACGTGCATACCGAGAATAATCAACTGGGTTGTAGACACGCAACCCAAGTGGAAGGACCTAGACCGCAAAATTTTTTAATCCCCAAAGTTAGAGGTAAGCCCTTGCTTGCAACTAATGAAGAGATCGCTATGGACTACTTCCAACCATTTGTTGATGGAGACGACCTTAAGACGTGA Protein sequence MSTWSTSRWLMTRTLQQLSLGRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTENNQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDYFQPFVDGDDLKT
Homology
BLAST of Lag0022129 vs. NCBI nr
Match: KAA0047596.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 63.5 bits (153), Expect = 1.5e-06 Identity = 39/112 (34.82%), Postives = 59/112 (52.68%), Query Frame = 0 Query: 21 GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTEN 80 GR AFELL+ FM++ + SKG TGI MG FIFP L + P + +V + Sbjct: 355 GRVAFELLVDFMNRVVCSKGQTGISMGGFIFPIL----AWAYEVIPTLSTPPNFFVTRIS 414
Query: 81 NQ----LGCRHATQVEGP--RPQNFLIPKVRGKPLLATNEEIAMDYFQPFVD 127 N+ + C TQ + + + F P + P+LAT +E+ M +F PF++ Sbjct: 415 NEVPRIINCATDTQPKWKDLKQKVFDSPTLEVSPMLATPDEVGMPFFAPFIE 462
BLAST of Lag0022129 vs. NCBI nr
Match: KAA0035989.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 58.5 bits (140), Expect = 4.9e-05 Identity = 34/106 (32.08%), Postives = 49/106 (46.23%), Query Frame = 0 Query: 21 GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTEN 80 GR AFELL+ FM++ + SKG TGI MG + LG+R PK+ + Sbjct: 124 GRVAFELLVNFMNRVVCSKGKTGISMGGGVSHSYLGLRADTQPKWKDL------------ 183
Query: 81 NQLGCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDYFQPFVD 127 + + F P + P+LAT E+ M YF PF++ Sbjct: 184 --------------KQKVFDSPTLEVSPMLATPTEVGMPYFAPFIE 203
BLAST of Lag0022129 vs. NCBI nr
Match: KAA0056158.1 (protein Ycf2-like [Cucumis melo var. makuwa]) HSP 1 Score: 55.1 bits (131), Expect = 5.4e-04 Identity = 35/111 (31.53%), Postives = 56/111 (50.45%), Query Frame = 0 Query: 21 GRCAFELLLGFMHKALVSKGATGIMMGEFIFPYLLGIRGHPDPKFNKIFLPGSVYVHTEN 80 GR AFELL+ FM+KA+ SK T I+MG FIFP L+ + + P + + + Sbjct: 139 GRVAFELLVEFMNKAICSKEQTEILMGGFIFPILV----WANEVIPTLSTPPNYFATRIS 198
Query: 81 NQL------GCRHATQVEGPRPQNFLIPKVRGKPLLATNEEIAMDYFQPFV 126 N++ ++ + + + F P + P+LAT E+ YF PF+ Sbjct: 199 NEVPRIINWAADTQSKWKDLKQKVFDSPTLEVSPMLATPNEVERPYFAPFL 245
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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