Lag0022083 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0022083
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase
Location	chr7: 17756461 .. 17757471 (-)
RNA-Seq Expression	Lag0022083
Synteny	Lag0022083

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATACAACAAGATTCTCATCATCGTCAGGTATGCCCTTGTAATAAATTATGTTTTAAATAATTGTATGTTTAAGTAATTACTATTCCATGAGATGCATGATTTTCCTTTCCATTTAGTTTTGACGAGATTATTAAATAGGCTTAGTATGGGTTTAGAAACTTGAAGTATGCCTCCACGTGGTCAAGATCGTGGACAAGGTCGTGGATGTTGACGCGGACGCGGACGTGGACATGGACGTGGACGTGACCGTGGTAGAGGTGTAGAGGCCTGACACTCCCAGAGCAAGTAGATCCTCTATCGATCAATATGATGAAGATCTCCCTGATGAGCAAGCTCCTGAACCTCCAGCATCGACGCAGACTGTCACTTTGACTTTAGAGGCTTTTCAGGCGCTTATGAATAATGTCATTGCTAATCAGGCGCCCCAAGCGAACAAAATGAGGACCAGGGTCCGACGGGCTCAACTGTTGGGTTGGGTGTCTTAAGGATTTTAAGAAGTACGACACATTTAGCAAGAAAACCGTAGACCCCACGGAGGTCGAAGCTTGGACCGCTACCACCGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGAGCAACAGGTGTCGTGCATGGTTTTTATCCTAAGAAACGATGCCCTGTTGTGGTGGAGATCGGCTGAGAGATCCATCGATGTAAGTATTGGACCGGTTACTTGGTTGCAGTTCAAGGAGGTGTTCTTCCAGAAATATTACTCGACCATTATCAGGTACAGAAAGGAGAAGGAATTCCTAACCTTGATGCAAGGAGAGAAGTCAGTAGAAGAATACGAGCTAGAGTTCACCCGACTGTCCCGTTTCGCCCCTGAAATGGTGGATACGGAGGCGAAGAAGACAAAGAGGTTCATCTTGGGCCTCAGAGCTGACGTCCAGAGGGTTGTTGGAGTCCTTGGCCAACGGACTACGCAGCGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACTGTCAATGCAACTCCAGTAG

mRNA sequence

ATGGCTATACAACAAGATTCTCATCATCGTCAGAGGCCTGACACTCCCAGAGCAAGTAGATCCTCTATCGATCAATATGATGAAGATCTCCCTGATGAGCAAGCTCCTGAACCTCCAGCATCGACGCAGACTGTCACTTTGACTTTAGAGGCTTTTCAGGCGCTTATGAATAATGATTTTAAGAAGTACGACACATTTAGCAAGAAAACCGTAGACCCCACGGAGGTCGAAGCTTGGACCGCTACCACCGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGAGCAACAGGTGTCGTGCATGGTTTTTATCCTAAGAAACGATGCCCTGTTGTGGTGGAGATCGGCTGAGAGATCCATCGATGTAAGTATTGGACCGGTTACTTGGTTGCAGTTCAAGGAGGTGTTCTTCCAGAAATATTACTCGACCATTATCAGGTACAGAAAGGAGAAGGAATTCCTAACCTTGATGCAAGGAGAGAAGTCAGTAGAAGAATACGAGCTAGAGTTCACCCGACTGTCCCGTTTCGCCCCTGAAATGGTGGATACGGAGGCGAAGAAGACAAAGAGGTTCATCTTGGGCCTCAGAGCTGACGTCCAGAGGGTTGTTGGAGTCCTTGGCCAACGGACTACGCAGCGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACTGTCAATGCAACTCCAGTAG

Coding sequence (CDS)

ATGGCTATACAACAAGATTCTCATCATCGTCAGAGGCCTGACACTCCCAGAGCAAGTAGATCCTCTATCGATCAATATGATGAAGATCTCCCTGATGAGCAAGCTCCTGAACCTCCAGCATCGACGCAGACTGTCACTTTGACTTTAGAGGCTTTTCAGGCGCTTATGAATAATGATTTTAAGAAGTACGACACATTTAGCAAGAAAACCGTAGACCCCACGGAGGTCGAAGCTTGGACCGCTACCACCGAAGAGATTTTTCGCTATATGGGATGCCCCGAGGAGCAACAGGTGTCGTGCATGGTTTTTATCCTAAGAAACGATGCCCTGTTGTGGTGGAGATCGGCTGAGAGATCCATCGATGTAAGTATTGGACCGGTTACTTGGTTGCAGTTCAAGGAGGTGTTCTTCCAGAAATATTACTCGACCATTATCAGGTACAGAAAGGAGAAGGAATTCCTAACCTTGATGCAAGGAGAGAAGTCAGTAGAAGAATACGAGCTAGAGTTCACCCGACTGTCCCGTTTCGCCCCTGAAATGGTGGATACGGAGGCGAAGAAGACAAAGAGGTTCATCTTGGGCCTCAGAGCTGACGTCCAGAGGGTTGTTGGAGTCCTTGGCCAACGGACTACGCAGCGGCCCTTCGAGCGACCACCTTTATGGGCATGCCAACTGTCAATGCAACTCCAGTAG

Protein sequence

MAIQQDSHHRQRPDTPRASRSSIDQYDEDLPDEQAPEPPASTQTVTLTLEAFQALMNNDFKKYDTFSKKTVDPTEVEAWTATTEEIFRYMGCPEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKEFLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRTTQRPFERPPLWACQLSMQLQ

Homology

[Close]

BLAST of Lag0022083 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia])

HSP 1 Score: 181.0 bits (458), Expect = 1.1e-41
Identity = 92/158 (58.23%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 51  AFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGCPEEQQVSCMVFILRND 110
           + +A    DFKKYD  +F   +VDP   EAW +  E IFRYM C EEQ+V C VF+L++D
Sbjct: 27  SIEAKYLRDFKKYDPRSFDGLSVDPMLAEAWLSLMETIFRYMRCLEEQKVQCDVFMLKDD 86

Query: 111 ALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKEFLTLMQGEKSVEEYEL 170
           A LWW S ER IDVS GPVTWLQFKE FFQ+YY  I  YRK+ EFL L Q  +SVEEY+ 
Sbjct: 87  AFLWWESTERPIDVSGGPVTWLQFKEAFFQQYYPAITWYRKQVEFLNLKQDNRSVEEYDR 146

Query: 171 EFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVL 207
           EFT+LSRFAPE+VDTEA K +RFI+ L+ + +  V  L
Sbjct: 147 EFTKLSRFAPELVDTEATKCERFIIDLKDENKGFVATL 184

[Close]

BLAST of Lag0022083 vs. NCBI nr
Match: XP_038891712.1 (uncharacterized protein LOC120081110 [Benincasa hispida])

HSP 1 Score: 164.9 bits (416), Expect = 8.5e-37
Identity = 84/177 (47.46%), Postives = 113/177 (63.84%), Query Frame = 0


Query: 31  PDEQAPEPPASTQTVTLTLEAF--QALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEI 90
           P +Q P+          ++  F  +A    DFKKY+  TF+    DPT  E W +  E I
Sbjct: 20  PQDQVPQVQTQNMIQNQSMSGFSVEAKHLRDFKKYNPSTFNGSLKDPTNAELWISFIETI 79

Query: 91  FRYMGCPEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIR 150
           FRYM CPE+Q+V C VF+L + A +WW+ AER + V   PVTW QFKE F+ KY+S  +R
Sbjct: 80  FRYMKCPEDQKVQCAVFMLSDKAQIWWQLAERMLGVGGDPVTWEQFKERFYAKYFSANLR 139

Query: 151 YRKEKEFLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVV 204
           Y K++EFL L QG +SVEEY+ EF  LSRFAPE+V TEA + +RFI GL+  ++ +V
Sbjct: 140 YNKQREFLELRQGHRSVEEYDQEFDALSRFAPELVATEAMRAERFIQGLKESIRGIV 196

[Close]

BLAST of Lag0022083 vs. NCBI nr
Match: TYK01089.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-34
Identity = 79/189 (41.80%), Postives = 113/189 (59.79%), Query Frame = 0


Query: 27  DEDLPDEQAPEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTE 86
           ++  P   AP P      V     + +A    DF+KY+  TF     DPT+ + W ++ E
Sbjct: 361 EQQQPTPPAPAPAPVVPQVVSDQLSTEAKHLRDFRKYNPTTFDGSLKDPTKAQMWLSSLE 420

Query: 87  EIFRYMGCPEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTI 146
            IFRYM C E+Q+V C VF+L +    WW +AER +   +G +TW QFKE F+ K++S  
Sbjct: 421 TIFRYMKCSEDQKVQCAVFMLTDKGTAWWETAERMLGGDVGQITWEQFKESFYAKFFSAS 480

Query: 147 IRYRKEKEFLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVG 206
           +R  K +EFL L QG++ VE+Y+ EF  LSRFAPEM+ TEA +  +F+ GLR D+Q +V 
Sbjct: 481 LRDAKRQEFLNLEQGDRKVEQYDAEFDTLSRFAPEMIATEAARADKFVRGLRLDIQGLVE 540

Query: 207 VLGQRTTQR 214
           V  Q   +R
Sbjct: 541 VRPQDRKER 549

[Close]

BLAST of Lag0022083 vs. NCBI nr
Match: KAA0055932.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 154.8 bits (390), Expect = 8.8e-34
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 35  APEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGC 94
           AP  P   Q V + L A +A    DF+KY+  TF     +PT+ + W  + E IFRYM C
Sbjct: 78  APPAPEEAQPVPVQLSA-EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKC 137

Query: 95  PEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKE 154
           PE+Q+V C VF L +    WW +AER +   +  +TW QFKE F+ K++S  +++ K +E
Sbjct: 138 PEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKESFYAKFFSANVKHAKLQE 197

Query: 155 FLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRT 211
           FL L QG+ +VE+Y+ EF  LSRFAP+MV  EA +T++F+ GLR D+Q +V  L   T
Sbjct: 198 FLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPAT 254

[Close]

BLAST of Lag0022083 vs. NCBI nr
Match: KAA0046571.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-33
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 35  APEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGC 94
           AP  P   Q V + L A +A    DF+KY+  TF     +PT+ + W  + E IFRYM C
Sbjct: 78  APPAPEEAQPVPVQLSA-EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKC 137

Query: 95  PEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKE 154
           PE+Q+V C VF L +    WW +AER +   +  +TW QFKE F+ K++S  +++ K +E
Sbjct: 138 PEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQE 197

Query: 155 FLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRT 211
           FL L QG+ +VE+Y+ EF  LSRFAP+MV  EA +T++F+ GLR D+Q +V  L   T
Sbjct: 198 FLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPAT 254

[Close]

BLAST of Lag0022083 vs. ExPASy TrEMBL
Match: A0A6J1DSJ6 (uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023512 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.5e-42
Identity = 92/158 (58.23%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 51  AFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGCPEEQQVSCMVFILRND 110
           + +A    DFKKYD  +F   +VDP   EAW +  E IFRYM C EEQ+V C VF+L++D
Sbjct: 27  SIEAKYLRDFKKYDPRSFDGLSVDPMLAEAWLSLMETIFRYMRCLEEQKVQCDVFMLKDD 86

Query: 111 ALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKEFLTLMQGEKSVEEYEL 170
           A LWW S ER IDVS GPVTWLQFKE FFQ+YY  I  YRK+ EFL L Q  +SVEEY+ 
Sbjct: 87  AFLWWESTERPIDVSGGPVTWLQFKEAFFQQYYPAITWYRKQVEFLNLKQDNRSVEEYDR 146

Query: 171 EFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVL 207
           EFT+LSRFAPE+VDTEA K +RFI+ L+ + +  V  L
Sbjct: 147 EFTKLSRFAPELVDTEATKCERFIIDLKDENKGFVATL 184

[Close]

BLAST of Lag0022083 vs. ExPASy TrEMBL
Match: A0A5D3BSM2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001150 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34
Identity = 79/189 (41.80%), Postives = 113/189 (59.79%), Query Frame = 0


Query: 27  DEDLPDEQAPEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTE 86
           ++  P   AP P      V     + +A    DF+KY+  TF     DPT+ + W ++ E
Sbjct: 361 EQQQPTPPAPAPAPVVPQVVSDQLSTEAKHLRDFRKYNPTTFDGSLKDPTKAQMWLSSLE 420

Query: 87  EIFRYMGCPEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTI 146
            IFRYM C E+Q+V C VF+L +    WW +AER +   +G +TW QFKE F+ K++S  
Sbjct: 421 TIFRYMKCSEDQKVQCAVFMLTDKGTAWWETAERMLGGDVGQITWEQFKESFYAKFFSAS 480

Query: 147 IRYRKEKEFLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVG 206
           +R  K +EFL L QG++ VE+Y+ EF  LSRFAPEM+ TEA +  +F+ GLR D+Q +V 
Sbjct: 481 LRDAKRQEFLNLEQGDRKVEQYDAEFDTLSRFAPEMIATEAARADKFVRGLRLDIQGLVE 540

Query: 207 VLGQRTTQR 214
           V  Q   +R
Sbjct: 541 VRPQDRKER 549

[Close]

BLAST of Lag0022083 vs. ExPASy TrEMBL
Match: A0A5A7UJ81 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00550 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.2e-34
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 35  APEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGC 94
           AP  P   Q V + L A +A    DF+KY+  TF     +PT+ + W  + E IFRYM C
Sbjct: 78  APPAPEEAQPVPVQLSA-EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKC 137

Query: 95  PEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKE 154
           PE+Q+V C VF L +    WW +AER +   +  +TW QFKE F+ K++S  +++ K +E
Sbjct: 138 PEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKESFYAKFFSANVKHAKLQE 197

Query: 155 FLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRT 211
           FL L QG+ +VE+Y+ EF  LSRFAP+MV  EA +T++F+ GLR D+Q +V  L   T
Sbjct: 198 FLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPAT 254

[Close]

BLAST of Lag0022083 vs. ExPASy TrEMBL
Match: A0A5D3CQB5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001420 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.5e-34
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 35  APEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGC 94
           AP  P   Q V + L A +A    DF+KY+  TF     +PT+ + W  + E IFRYM C
Sbjct: 92  APPAPEEAQPVPVQLSA-EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKC 151

Query: 95  PEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKE 154
           PE+Q+V C VF L +    WW +AER +   +  +TW QFKE F+ K++S  +++ K +E
Sbjct: 152 PEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQE 211

Query: 155 FLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRT 211
           FL L QG+ +VE+Y+ EF  LSRFAP+MV  EA +T++F+ GLR D+Q +V  L   T
Sbjct: 212 FLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPAT 268

[Close]

BLAST of Lag0022083 vs. ExPASy TrEMBL
Match: A0A5A7TSL0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold191G001340 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 5.5e-34
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0


Query: 35  APEPPASTQTVTLTLEAFQALMNNDFKKYD--TFSKKTVDPTEVEAWTATTEEIFRYMGC 94
           AP  P   Q V + L A +A    DF+KY+  TF     +PT+ + W  + E IFRYM C
Sbjct: 92  APPAPEEAQPVPVQLSA-EAKHLRDFRKYNPKTFDGSMDNPTKAQMWLTSIETIFRYMKC 151

Query: 95  PEEQQVSCMVFILRNDALLWWRSAERSIDVSIGPVTWLQFKEVFFQKYYSTIIRYRKEKE 154
           PE+Q+V C VF L +    WW +AER +   +  +TW QFKE F+ K++S  +++ K +E
Sbjct: 152 PEDQKVQCAVFFLEDRGTAWWETAERMLGGDVSKITWEQFKENFYAKFFSANVKHAKLQE 211

Query: 155 FLTLMQGEKSVEEYELEFTRLSRFAPEMVDTEAKKTKRFILGLRADVQRVVGVLGQRT 211
           FL L QG+ +VE+Y+ EF  LSRFAP+MV  EA +T++F+ GLR D+Q +V  L   T
Sbjct: 212 FLNLEQGDMTVEQYDAEFDMLSRFAPDMVRDEAARTEKFVRGLRLDLQGIVRALRPAT 268

The following BLAST results are available for this feature:

BLAST of Lag0022083 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156662.1	1.1e-41	58.23	uncharacterized protein LOC111023512 [Momordica charantia]	[more]
XP_038891712.1	8.5e-37	47.46	uncharacterized protein LOC120081110 [Benincasa hispida]	[more]
TYK01089.1	5.1e-34	41.80	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0055932.1	8.8e-34	43.82	pol protein [Cucumis melo var. makuwa]	[more]
KAA0046571.1	1.1e-33	43.82	reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of Lag0022083 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0022083 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSJ6	5.5e-42	58.23	uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5D3BSM2	2.5e-34	41.80	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26...	[more]
A0A5A7UJ81	4.2e-34	43.82	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold31...	[more]
A0A5D3CQB5	5.5e-34	43.82	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7TSL0	5.5e-34	43.82	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19...	[more]

BLAST of Lag0022083 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 101..196 e-value: 7.8E-16 score: 58.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..27
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 67..201
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 67..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0022083.1	Lag0022083.1	mRNA