
Lag0021771 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCGCGTGATTCCGGTCGTCGACATTTACACCATTGAGCCATCCAATCTCTCCGGTACGTACTTGGATATACTAATTAACTTTATATATATTTTTTTAAAGAACTTTATATAATTAATTAAGTGATTATTTATTTATGGGTTTTATTTATTTTTGTTGCAGGGTGTTCCGGGGGTGGTGTAGGAGGGACAGTGAGCAGTGGTTTTACTTTGTGAAGCAGCAAGAGAGGGAGGCTGAACAGAACGACGTCGTTTGGATCTGGGTATTGGAAGGCCACCGACTCATCGGGCCATGTCTACTCCTCCAACAATAG ATGCACCGCGTGATTCCGGTCGTCGACATTTACACCATTGAGCCATCCAATCTCTCCGGTACGGTGTTCCGGGGGTGGTGTAGGAGGGACAGTGAGCAGTGGTTTTACTTTGTGAAGCAGCAAGAGAGGGAGGCTGAACAGAACGACGTCGTTTGGATCTGGGTATTGGAAGGCCACCGACTCATCGGGCCATGTCTACTCCTCCAACAATAG ATGCACCGCGTGATTCCGGTCGTCGACATTTACACCATTGAGCCATCCAATCTCTCCGGTACGGTGTTCCGGGGGTGGTGTAGGAGGGACAGTGAGCAGTGGTTTTACTTTGTGAAGCAGCAAGAGAGGGAGGCTGAACAGAACGACGTCGTTTGGATCTGGGTATTGGAAGGCCACCGACTCATCGGGCCATGTCTACTCCTCCAACAATAG MHRVIPVVDIYTIEPSNLSGTVFRGWCRRDSEQWFYFVKQQEREAEQNDVVWIWVLEGHRLIGPCLLLQQ Homology
BLAST of Lag0021771 vs. NCBI nr
Match: XP_023533663.1 (NAC domain-containing protein 90 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.0 bits (175), Expect = 2.3e-09 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Lag0021771 vs. NCBI nr
Match: XP_022958454.1 (NAC domain-containing protein 90 [Cucurbita moschata] >KAG6605975.1 NAC domain-containing protein 90, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035927.1 NAC domain-containing protein 90, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 72.0 bits (175), Expect = 2.3e-09 Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0
BLAST of Lag0021771 vs. NCBI nr
Match: XP_022995147.1 (NAC domain-containing protein 90 [Cucurbita maxima]) HSP 1 Score: 68.6 bits (166), Expect = 2.5e-08 Identity = 35/49 (71.43%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Lag0021771 vs. NCBI nr
Match: XP_008449583.1 (PREDICTED: NAC domain-containing protein 90 [Cucumis melo]) HSP 1 Score: 67.8 bits (164), Expect = 4.3e-08 Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
BLAST of Lag0021771 vs. NCBI nr
Match: TYJ96056.1 (NAC domain-containing protein 90 [Cucumis melo var. makuwa]) HSP 1 Score: 67.8 bits (164), Expect = 4.3e-08 Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0
BLAST of Lag0021771 vs. ExPASy Swiss-Prot
Match: Q9FMR3 (NAC domain-containing protein 90 OS=Arabidopsis thaliana OX=3702 GN=NAC090 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.5e-08 Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
BLAST of Lag0021771 vs. ExPASy Swiss-Prot
Match: Q9M290 (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana OX=3702 GN=NAC061 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.2e-05 Identity = 20/45 (44.44%), Postives = 32/45 (71.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|