Lag0021766 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGCTGGAGAATGGCGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTGTCACACACGACGCGACCGTTCCAGACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGCAATTCACAAATGTTTCATAACCTTGAGATCTTCACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAGTCTTTAAATTTCAATGTATGAAATATTTAGACATGTTAGGGGTTGTTTCTTTTTTTAATGTATTACGTGCTGTAGATCATGTTATGTGGACGGTACTAGTTGGAACAATTTCAGTACATCGAAATCATTTAATAAAAATGCGTCTTTAATTCATCACGCTGTTATAGACATAAATTCCACATTTACATGTTACATATACAGGGATCGAGCCATGTGTACATGCATCAACACTAATAACGCGTTTACTATAGCGATTGAATTCGGACCATCTACATTGTTTCGTTGAACAACGTGACGAACGCGTAAAACTTTGATAACCAACGCCTCTTATTGATATCACGGTGACTACCGTTCACATTTTACATACTGACGGTGCAGCACAGAATGGCCATCTGCTAGGAATATTAAAGATTAACTACCATGAGTTATTCTACTATATCGAGGATTGTTTAACACGGGACAAGACAAACATGGCATCAACACCTTCTACATGATGTACACACACAGGTTGGGATTAGTTTTCACAAACGATGTGCCCGACCAATTTGTAGTGTAAAGTCGGACATACACAGCAAGGTCCCCGTGAGTACTACATCATGTCGGGCTTCATAAGACTGGACCGTGAACGGTCCCTTGCATCATCTGGGAACTTCCGCGGTTCGACATTCCCGGTATACAATAGGTTTACAGTAGGACTGGGTTCGCTTCCACAGCTATCCGCCCGTGTCTTGGGCAGTGGGGACAGACACAGACAGGAACAGTTGGACGTTGAAGATCTACATCCGTCGCACCATCCCGGCGAATGA ATGTCAGCTGGAGAATGGCGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTGTCACACACGACGCGACCGTTCCAGACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGCAATTCACAAATGTTTCATAACCTTGAGATCTTCACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAGTCTTTAAATTTCAATGTATGAAATATTTAGACATGTTAGGGGTTGTTTCTTTTTTTAATGTATTACGTGCTGTAGATCATGTTATGTGGACGTGTAAAGTCGGACATACACAGCAAGGTCCCCGTGAGTACTACATCATGTCGGGCTTCATAAGACTGGACCGTGAACGGTCCCTTGCATCATCTGGGAACTTCCGCGGTTCGACATTCCCGGTATACAATAGGTTTACAGTAGGACTGGGTTCGCTTCCACAGCTATCCGCCCGTGTCTTGGGCAGTGGGGACAGACACAGACAGGAACAGTTGGACGTTGAAGATCTACATCCGTCGCACCATCCCGGCGAATGA ATGTCAGCTGGAGAATGGCGTTTTTATCTGGGAAACCCCAAATCCCCTGTATTTCAAGATGGTGTCACACACGACGCGACCGTTCCAGACACAACACGACATAATCGAACTGGAGATTCGATTCAATCACAACCTTCGGAGGGCTTTGGCAATTCACAAATGTTTCATAACCTTGAGATCTTCACTCGCTTACGACCTCCGACAGGGCTTTTCTTGCGAGTCTTTAAATTTCAATGTATGAAATATTTAGACATGTTAGGGGTTGTTTCTTTTTTTAATGTATTACGTGCTGTAGATCATGTTATGTGGACGTGTAAAGTCGGACATACACAGCAAGGTCCCCGTGAGTACTACATCATGTCGGGCTTCATAAGACTGGACCGTGAACGGTCCCTTGCATCATCTGGGAACTTCCGCGGTTCGACATTCCCGGTATACAATAGGTTTACAGTAGGACTGGGTTCGCTTCCACAGCTATCCGCCCGTGTCTTGGGCAGTGGGGACAGACACAGACAGGAACAGTTGGACGTTGAAGATCTACATCCGTCGCACCATCCCGGCGAATGA MSAGEWRFYLGNPKSPVFQDGVTHDATVPDTTRHNRTGDSIQSQPSEGFGNSQMFHNLEIFTRLRPPTGLFLRVFKFQCMKYLDMLGVVSFFNVLRAVDHVMWTCKVGHTQQGPREYYIMSGFIRLDRERSLASSGNFRGSTFPVYNRFTVGLGSLPQLSARVLGSGDRHRQEQLDVEDLHPSHHPGE Homology
BLAST of Lag0021766 vs. NCBI nr
Match: CAP78911.1 (AC3 protein [Ageratum yellow vein virus - [G129]]) HSP 1 Score: 102.8 bits (255), Expect = 3.2e-18 Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 0
BLAST of Lag0021766 vs. NCBI nr
Match: AFJ39285.1 (replication enhancer protein [Tomato leaf curl Bangladesh virus-[India:Udaipur:Gaillardia:2009]]) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-16 Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 0
BLAST of Lag0021766 vs. NCBI nr
Match: AXE43633.1 (REn protein [Croton yellow vein mosaic virus]) HSP 1 Score: 95.9 bits (237), Expect = 4.0e-16 Identity = 46/94 (48.94%), Postives = 63/94 (67.02%), Query Frame = 0
BLAST of Lag0021766 vs. NCBI nr
Match: YP_010087327.1 (transcription activator protein [Bitter gourd yellow mosaic virus] >AYQ58881.1 transcription activator protein [Bitter gourd yellow mosaic virus]) HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13 Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0
BLAST of Lag0021766 vs. NCBI nr
Match: QUQ60663.1 (transcription activator protein [Bitter gourd yellow mosaic virus]) HSP 1 Score: 86.7 bits (213), Expect = 2.4e-13 Identity = 49/118 (41.53%), Postives = 63/118 (53.39%), Query Frame = 0
BLAST of Lag0021766 vs. ExPASy Swiss-Prot
Match: P14977 (Replication enhancer protein OS=African cassava mosaic virus (isolate West Kenyan 844) OX=10818 GN=AC3 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.5e-10 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0
BLAST of Lag0021766 vs. ExPASy Swiss-Prot
Match: P36281 (Replication enhancer protein OS=Tomato leaf curl virus (strain Australia) OX=223353 GN=C3 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.2e-09 Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0
BLAST of Lag0021766 vs. ExPASy Swiss-Prot
Match: P27265 (Replication enhancer protein OS=Tomato yellow leaf curl virus (strain Israel) OX=66366 GN=C3 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of Lag0021766 vs. ExPASy Swiss-Prot
Match: P14968 (Transcriptional activator protein OS=African cassava mosaic virus (isolate Nigerian) OX=222073 GN=AC2 PE=3 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.7e-09 Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 0
BLAST of Lag0021766 vs. ExPASy Swiss-Prot
Match: P14976 (Transcriptional activator protein OS=African cassava mosaic virus (isolate West Kenyan 844) OX=10818 GN=AC2 PE=1 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 4.9e-09 Identity = 32/72 (44.44%), Postives = 40/72 (55.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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