Lag0021765 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACAGAGGAGTCCGCACTGGAGAAACAATCCAAGGTTGATGAGTCTCTCAATATTCCTCATCTTGCTATGGCTGCAAATCTTGAAACTCAAGGAGGCCGTGGAAACTGGCACAATAACAATCGAGGAGGTCGCAGTGGCGGATTTGATAATAATCGTGGTGGTCGGGGCGTTTGCAGTGGCTTCTTTCCTCAAAACAGACCTTCACCGTCTGGTAATACTCCTCCTTCACTTCCTCAAGGTCAGTATTCCAATAAGGTAACTTGCCAGATTTGTCATCGGTATGGACACAATGCCCTAGACTGCTACAATCGTATGAATTACTCATACCCTCAAGGTCAGTATTAA ATGAAGACAGAGGAGTCCGCACTGGAGAAACAATCCAAGGTTGATGAGTCTCTCAATATTCCTCATCTTGCTATGGCTGCAAATCTTGAAACTCAAGGAGGCCGTGGAAACTGGCACAATAACAATCGAGGAGGTCGCAGTGGCGGATTTGATAATAATCGTGGTGGTCGGGGCGTTTGCAGTGGCTTCTTTCCTCAAAACAGACCTTCACCGTCTGGTAATACTCCTCCTTCACTTCCTCAAGGTCAGTATTCCAATAAGGTAACTTGCCAGATTTGTCATCGGTATGGACACAATGCCCTAGACTGCTACAATCGTATGAATTACTCATACCCTCAAGGTCAGTATTAA ATGAAGACAGAGGAGTCCGCACTGGAGAAACAATCCAAGGTTGATGAGTCTCTCAATATTCCTCATCTTGCTATGGCTGCAAATCTTGAAACTCAAGGAGGCCGTGGAAACTGGCACAATAACAATCGAGGAGGTCGCAGTGGCGGATTTGATAATAATCGTGGTGGTCGGGGCGTTTGCAGTGGCTTCTTTCCTCAAAACAGACCTTCACCGTCTGGTAATACTCCTCCTTCACTTCCTCAAGGTCAGTATTCCAATAAGGTAACTTGCCAGATTTGTCATCGGTATGGACACAATGCCCTAGACTGCTACAATCGTATGAATTACTCATACCCTCAAGGTCAGTATTAA MKTEESALEKQSKVDESLNIPHLAMAANLETQGGRGNWHNNNRGGRSGGFDNNRGGRGVCSGFFPQNRPSPSGNTPPSLPQGQYSNKVTCQICHRYGHNALDCYNRMNYSYPQGQY Homology
BLAST of Lag0021765 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia]) HSP 1 Score: 68.9 bits (167), Expect = 3.2e-08 Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of Lag0021765 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 46/125 (36.80%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Lag0021765 vs. NCBI nr
Match: XP_011658579.1 (uncharacterized protein LOC105436058 [Cucumis sativus]) HSP 1 Score: 60.1 bits (144), Expect = 1.5e-05 Identity = 46/125 (36.80%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Lag0021765 vs. NCBI nr
Match: KAA8537769.1 (hypothetical protein F0562_027652 [Nyssa sinensis]) HSP 1 Score: 59.3 bits (142), Expect = 2.5e-05 Identity = 46/120 (38.33%), Postives = 60/120 (50.00%), Query Frame = 0
BLAST of Lag0021765 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 57.4 bits (137), Expect = 9.6e-05 Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|