Lag0021758 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAGGAAAAAACATCTAGGGTGCACTATTGAGTCCACGTCAACGATAGACTGCAAAGTAAGAGCCTTGAAACGACAGTATGGAGCAATCGTCGAGATGTTGGGTCAGGGGTGTAGTGGTTTTGGGTGGAATGAGGAGTATATATGTGTCGAAGCTGAGAAAGAAGTGTTCGATGCGTGGGTCAAGGTAAGGTTATTGTTCACTCATATATAAAAACTTGTATACTATGTAAGCTAATATTCTCTGATATATAAAAACTTGTATACTATGTAAGCTAATATTCTCTGATATATATGTAGTCTCACTTAGTTGCGAAAGGACTCCTAAACAAGTCATTCCCTCACTACAAGGAATTGACCTTCATGTTCGGTAAAGATCGAACTAGCGAGGTGGGTTGTTCCGTACCAGCTGATATGACCTCAAGCCACCATGTGGATGAAGAGGGCGACTTCAACATGGGAGGATCGCCAGACTATTATGTCCCAGTGTCACTTGCGTTAATAACGTCGTCAAGGTTGAGTTGGAGGAAGTTCCCGTCACCCCACTAG ATGATGAGGAAAAAACATCTAGGGTGCACTATTGAGTCCACGTCAACGATAGACTGCAAAGTAAGAGCCTTGAAACGACAGTATGGAGCAATCGTCGAGATGTTGGGTCAGGGGTGTAGTGGTTTTGGGTGGAATGAGGAGTATATATGTGTCGAAGCTGAGAAAGAAGTGTTCGATGCGTGGGTCAAGTCTCACTTAGTTGCGAAAGGACTCCTAAACAAGTCATTCCCTCACTACAAGGAATTGACCTTCATGTTCGGTAAAGATCGAACTAGCGAGGTGGGTTGTTCCGTACCAGCTGATATGACCTCAAGCCACCATGTGGATGAAGAGGGCGACTTCAACATGGGAGGATCGCCAGACTATTATGTCCCAGTGTCACTTGCGTTAATAACGTCGTCAAGGTTGAGTTGGAGGAAGTTCCCGTCACCCCACTAG ATGATGAGGAAAAAACATCTAGGGTGCACTATTGAGTCCACGTCAACGATAGACTGCAAAGTAAGAGCCTTGAAACGACAGTATGGAGCAATCGTCGAGATGTTGGGTCAGGGGTGTAGTGGTTTTGGGTGGAATGAGGAGTATATATGTGTCGAAGCTGAGAAAGAAGTGTTCGATGCGTGGGTCAAGTCTCACTTAGTTGCGAAAGGACTCCTAAACAAGTCATTCCCTCACTACAAGGAATTGACCTTCATGTTCGGTAAAGATCGAACTAGCGAGGTGGGTTGTTCCGTACCAGCTGATATGACCTCAAGCCACCATGTGGATGAAGAGGGCGACTTCAACATGGGAGGATCGCCAGACTATTATGTCCCAGTGTCACTTGCGTTAATAACGTCGTCAAGGTTGAGTTGGAGGAAGTTCCCGTCACCCCACTAG MMRKKHLGCTIESTSTIDCKVRALKRQYGAIVEMLGQGCSGFGWNEEYICVEAEKEVFDAWVKSHLVAKGLLNKSFPHYKELTFMFGKDRTSEVGCSVPADMTSSHHVDEEGDFNMGGSPDYYVPVSLALITSSRLSWRKFPSPH Homology
BLAST of Lag0021758 vs. NCBI nr
Match: KAA0064022.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.6 bits (340), Expect = 3.5e-28 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Lag0021758 vs. NCBI nr
Match: KAA0041588.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.2 bits (339), Expect = 4.5e-28 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of Lag0021758 vs. NCBI nr
Match: KAA0038314.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27 Identity = 60/127 (47.24%), Postives = 85/127 (66.93%), Query Frame = 0
BLAST of Lag0021758 vs. NCBI nr
Match: KAA0035078.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK03601.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27 Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Lag0021758 vs. NCBI nr
Match: KAA0058882.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 134.0 bits (336), Expect = 1.0e-27 Identity = 62/126 (49.21%), Postives = 83/126 (65.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|