Lag0021744 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACACACGGGTTAGAGTGGTTCGGCAACAGAGGCCTACATCCACTATGGAGGGAGTGTCGATCTTATTAAGGTAAAGCAGAACAAAAGGTACAAGAAAGAGATTTTCATTTCATCGGCAAGGTGAGTTTAGCTTGCAAGGAAGCTCATTCTATGGAGGAAATTTGAAGGTAATATTCTTCTTGTGTGTGTTGAACAGGCGACGGAGAGCTCTTGTGATCATGGAAGCTCTGTGGCTTTCTGTGAATCTGTTTTCTGTTTGGGGAAGATGACTTTTGCATTGGGTCAATTGGTCGAATGTTTGGATGATCGATGAAAAAATAAATGATGTAAACTAATGCAATAAATAATTGATGATAGAAAGGAGACTAGAATAGAAAAATAGGTGTAGATCAGGATTTTTGAAGTTAAAAGAAAATTTGTTGTAAAAAAAAAAAGTTAAAAGAAAAATTAAACTTAATATTAAAAAATAATAAATATAAATCCTTTTCTTTCTTTTTGAGTTCAATACCATATAGAGGTGGGGGAGTTCTATAAACAAGAAATAATAATAAATTTTAAACGTATGTTGCTTTGTTACAAATACATGACACATATATTAATTTGAACACAGTTCAATTTGTTAAAACATTAGACAAATTTGAAAGGGAAGTATAACCAAGCTCGGAGGGGTTCATGTTATTTCTAGAAATAGGTACTAACTTTTTTTTAATTCCCGATTTTTGATCTTTTAAAAGTATTCTAAAATGTGTATAAACCATTGGAAATTAGTAGTTACCAAACAAGAAATAATTAATAAGAAATGAAAATGTTATCAACATTACACAAACAACAAAATGGACTGAAATAATTGCGTAAATTCTAAAACTATTCGTAAATATGACAAAATTGAAATTTATCAATAATAAAAGTCTGTTTGCAATAGCTTTTTATGTGGGAAGAATTTCAAAAATTCCAGCCATCTCTTTTGGGAATGCAAAATCCCTAAAGAGGCTTGGAAAATTTTTATCCCTACCTCACTTAGCTTGTTTGCTACTTGCAGGAGGGACTCGTCGCCTATGGATTATTGGAACTGGCTCGTGGATCATGTGGGGGAAGGGAGACATAGAGACAACCATTTGCATTTTGTGGTCAATCTGGATTTTAAGGAACATGGACCTAATGCAAAATGTTTCGGTGGCTTTAAACAATCTTCAATCCTCAATTCAATCGATGCTCAAAGACAATGAGGAAGTGGCTGAAGGAAAGCTTACCTGCGTCAAGCTGAGGAGCCTAGCGAGTCACGATCCGTGGAAGAACCCCCCCCCCCCTCGAACGCGTGGAAATTGAACTCGGATGCTTCTTGGCTCGAAAATTCTGGGCAAGGAGGCTTGGGATGGGTGGTTCGTGACTCTTTAGGATCCTTGATCTGCGGTGGCATGAAACAAACGAAGAAAAATTGGGACATCAGTACTCTCGAAGCCATGGCAATACTGGAAGGGATCAATTGTGTAAAGCAAACCTGCATTGATTTGCAATGCGATTTAGATGTGGAATCAGACTCCAAAGTCGTTATCGAGGCAATTAATGACATCTCTGAAGACCTTTCAGAGGTCAGCAACATCATCGACCTGATCAATTCTACTACTTCAGGTCTCCGATCGGTGATTTTTTGGCACTGCAAGAGGGAATCCAACGCACTAGCCCATTGCGTTGCCCGACGTGCTTCTTCTTCTTCTGCTAGTGTGGATAATTTTTTTGATTCTGATCAGGACGCTACCCCTTCGAGGGAGTTGGGCAGTATATTTTGGGCGCCTGTTTTACCGCGTTGGATTTTGCCCCTCATTGATGAGGGTAGTTATGGTTCTGGTGTTAATTTGCTTTCCGTTTAG ATGAACACACGGGTTAGAGTGGTTCGGCAACAGAGGCCTACATCCACTATGGAGGGAGTGTCGATCTTATTAAGGCGACGGAGAGCTCTTGTGATCATGGAAGCTCTGTGGCTTTCTGTGAATCTGAAAGCTTACCTGCGTCAAGCTGAGGAGCCTAGCGAGTCACGATCCGTGGAAGAACCCCCCCCCCCCTCGAACGCGTGGAAATTGAACTCGGATGCTTCTTGGCTCGAAAATTCTGGGCAAGGAGGCTTGGGATGGGTGGTTCGTGACTCTTTAGGATCCTTGATCTGCGGTGGCATGAAACAAACGAAGAAAAATTGGGACATCAGTACTCTCGAAGCCATGGCAATACTGGAAGGGATCAATTGTGTAAAGCAAACCTGCATTGATTTGCAATGCGATTTAGATGTGGAATCAGACTCCAAAGTCGTTATCGAGGCAATTAATGACATCTCTGAAGACCTTTCAGAGGTCAGCAACATCATCGACCTGATCAATTCTACTACTTCAGGTCTCCGATCGGTGATTTTTTGGCACTGCAAGAGGGAATCCAACGCACTAGCCCATTGCGTTGCCCGACGTGCTTCTTCTTCTTCTGCTAGTGTGGATAATTTTTTTGATTCTGATCAGGACGCTACCCCTTCGAGGGAGTTGGGCAGTATATTTTGGGCGCCTGTTTTACCGCGTTGGATTTTGCCCCTCATTGATGAGGGTAGTTATGGTTCTGGTGTTAATTTGCTTTCCGTTTAG ATGAACACACGGGTTAGAGTGGTTCGGCAACAGAGGCCTACATCCACTATGGAGGGAGTGTCGATCTTATTAAGGCGACGGAGAGCTCTTGTGATCATGGAAGCTCTGTGGCTTTCTGTGAATCTGAAAGCTTACCTGCGTCAAGCTGAGGAGCCTAGCGAGTCACGATCCGTGGAAGAACCCCCCCCCCCCTCGAACGCGTGGAAATTGAACTCGGATGCTTCTTGGCTCGAAAATTCTGGGCAAGGAGGCTTGGGATGGGTGGTTCGTGACTCTTTAGGATCCTTGATCTGCGGTGGCATGAAACAAACGAAGAAAAATTGGGACATCAGTACTCTCGAAGCCATGGCAATACTGGAAGGGATCAATTGTGTAAAGCAAACCTGCATTGATTTGCAATGCGATTTAGATGTGGAATCAGACTCCAAAGTCGTTATCGAGGCAATTAATGACATCTCTGAAGACCTTTCAGAGGTCAGCAACATCATCGACCTGATCAATTCTACTACTTCAGGTCTCCGATCGGTGATTTTTTGGCACTGCAAGAGGGAATCCAACGCACTAGCCCATTGCGTTGCCCGACGTGCTTCTTCTTCTTCTGCTAGTGTGGATAATTTTTTTGATTCTGATCAGGACGCTACCCCTTCGAGGGAGTTGGGCAGTATATTTTGGGCGCCTGTTTTACCGCGTTGGATTTTGCCCCTCATTGATGAGGGTAGTTATGGTTCTGGTGTTAATTTGCTTTCCGTTTAG MNTRVRVVRQQRPTSTMEGVSILLRRRRALVIMEALWLSVNLKAYLRQAEEPSESRSVEEPPPPSNAWKLNSDASWLENSGQGGLGWVVRDSLGSLICGGMKQTKKNWDISTLEAMAILEGINCVKQTCIDLQCDLDVESDSKVVIEAINDISEDLSEVSNIIDLINSTTSGLRSVIFWHCKRESNALAHCVARRASSSSASVDNFFDSDQDATPSRELGSIFWAPVLPRWILPLIDEGSYGSGVNLLSV Homology
BLAST of Lag0021744 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 86.7 bits (213), Expect = 3.2e-13 Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 0
BLAST of Lag0021744 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 84.0 bits (206), Expect = 2.1e-12 Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of Lag0021744 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 80.9 bits (198), Expect = 1.7e-11 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Lag0021744 vs. NCBI nr
Match: XP_019175595.1 (PREDICTED: uncharacterized protein LOC109170919 [Ipomoea nil]) HSP 1 Score: 75.1 bits (183), Expect = 9.6e-10 Identity = 59/185 (31.89%), Postives = 98/185 (52.97%), Query Frame = 0
BLAST of Lag0021744 vs. NCBI nr
Match: XP_030969974.1 (uncharacterized protein LOC115990267 [Quercus lobata]) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-09 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 0
BLAST of Lag0021744 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 1.5e-13 Identity = 49/140 (35.00%), Postives = 82/140 (58.57%), Query Frame = 0
BLAST of Lag0021744 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.0e-12 Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of Lag0021744 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 80.9 bits (198), Expect = 8.5e-12 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Lag0021744 vs. ExPASy TrEMBL
Match: A0A5B7BU49 (RNase H domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_041820 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.9e-11 Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Lag0021744 vs. ExPASy TrEMBL
Match: A0A6J1D5W1 (uncharacterized protein LOC111017329 OS=Momordica charantia OX=3673 GN=LOC111017329 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 7.9e-10 Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 0
BLAST of Lag0021744 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 46.2 bits (108), Expect = 4.4e-05 Identity = 45/138 (32.61%), Postives = 66/138 (47.83%), Query Frame = 0
BLAST of Lag0021744 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04 Identity = 43/147 (29.25%), Postives = 67/147 (45.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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