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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGATCAAAGGTAAGGGAATCTCCGTACAACTTCTGGTGAAGATACCGATGAAACGACCGACCGAATCGCCGCTTTCTTCCTTTCTCACCTTTCAACCTTCACACGTGGAATTTCTCACCCCAATCACACTCTTCTACCGAAAATACCCTTGCCTTTTCCTTTTAATTACGGCAGTGGCACCACCTCAATGGAGTCAACAATGGCTCAACCCATCTGGGTAAATTCGAAAATAGCGAGAACTTGAAGGGGTACTGTGGACACTTTGGCGTATTTGGAGTGCAGGTCTGAATCGAAGCTTCTCTCTCTGTTCAGCTCTGAAAGTTTCTTTCTTGACGTTGTATTCTCTTTTGACTTTGATTGGAAACCGATTTCATTTTCTGTGAAATTGCAGAGTTTCTTCATGCCTATTCACATCTCTGACTATAACACGTTTCTGGGTCCTCGATCGCCTCATAATTTCCCTCGATTTTTCCTTCGCCATTGCAATTAGCTCCGTGGGTGAGTAGCTTTCTTTCCTTTAGTGGGGGGTTTTTGTTTCTGTATCTGATTCGCTGGATTGTGTTCTTAACGTATTTCGAGATTTGGGTTTGATTGTTTTTTTGTTCTTCTGATATTGGAGAGCTGTAATTTTGTTTTCTGGGTCCCGGTTTCTTGGAATTTTGGTTGAGTAATCGTGCTGTTTAGATCAATTTTCTTGGCTCTTAATTGTTGCCATGTTTGATTGTTCTTCAACAGCTGAGCTTTCAGGGTGGATATTCGTGATACTGAGATTGAATTTCTTGTTTGATTAG mRNA sequence ATGATCAAAGGTAAGGGAATCTCCGTACAACTTCTGGTGAAGATACCGATGAAACGACCGACCGAATCGCCGCTTTCTTCCTTTCTCACCTTTCAACCTTCACACGTGGAATTTCTCACCCCAATCACACTCTTCTACCGAAAATACCCTTGCCTTTTCCTTTTAATTACGGCAGTGGCACCACCTCAATGGAGTCAACAATGGCTCAACCCATCTGGAGTTTCTTCATGCCTATTCACATCTCTGACTATAACACGTTTCTGGGTCCTCGATCGCCTCATAATTTCCCTCGATTTTTCCTTCGCCATTGCAATTAGCTCCGTGGCTGAGCTTTCAGGGTGGATATTCGTGATACTGAGATTGAATTTCTTGTTTGATTAG Coding sequence (CDS) ATGATCAAAGGTAAGGGAATCTCCGTACAACTTCTGGTGAAGATACCGATGAAACGACCGACCGAATCGCCGCTTTCTTCCTTTCTCACCTTTCAACCTTCACACGTGGAATTTCTCACCCCAATCACACTCTTCTACCGAAAATACCCTTGCCTTTTCCTTTTAATTACGGCAGTGGCACCACCTCAATGGAGTCAACAATGGCTCAACCCATCTGGAGTTTCTTCATGCCTATTCACATCTCTGACTATAACACGTTTCTGGGTCCTCGATCGCCTCATAATTTCCCTCGATTTTTCCTTCGCCATTGCAATTAGCTCCGTGGCTGAGCTTTCAGGGTGGATATTCGTGATACTGAGATTGAATTTCTTGTTTGATTAG Protein sequence MIKGKGISVQLLVKIPMKRPTESPLSSFLTFQPSHVEFLTPITLFYRKYPCLFLLITAVAPPQWSQQWLNPSGVSSCLFTSLTITRFWVLDRLIISLDFSFAIAISSVAELSGWIFVILRLNFLFD
Homology
BLAST of Lag0021743 vs. NCBI nr
Match: KAG7029090.1 (hypothetical protein SDJN02_10274, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 59.3 bits (142), Expect = 2.7e-05 Identity = 32/41 (78.05%), Postives = 33/41 (80.49%), Query Frame = 0 Query: 74 VSSCLFTSLTITRFWVLDRLIISLDFSFAIAISSVAELSGW 115 VSSC FTSLTITRFWVLDRLII LDF FAIAI +L GW Sbjct: 30 VSSCQFTSLTITRFWVLDRLIIPLDFPFAIAI----KLRGW 66
BLAST of Lag0021743 vs. NCBI nr
Match: KAG6597651.1 (hypothetical protein SDJN03_10831, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 56.2 bits (134), Expect = 2.3e-04 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 0 Query: 74 VSSCLFTSLTITRFWVLDRLIISLDFSFAIAI 106 VSSC FTSLTITRFWVLDRLII LDF FAIAI Sbjct: 787 VSSCQFTSLTITRFWVLDRLIIPLDFPFAIAI 818
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7029090.1 | 2.7e-05 | 78.05 | hypothetical protein SDJN02_10274, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6597651.1 | 2.3e-04 | 90.63 | hypothetical protein SDJN03_10831, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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