Lag0021739 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGAGTCTGAATTGAATTATACTGTTGAAGCCATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCCTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTAATGCTTTGAGGATACCCGACGGTCCAACCGATTCCAACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAGCAAGCTTCCTCAGTAA ATGAGAGAGTCTGAATTGAATTATACTGTTGAAGCCATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCCTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTAATGCTTTGAGGATACCCGACGGTCCAACCGATTCCAACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAGCAAGCTTCCTCAGTAA ATGAGAGAGTCTGAATTGAATTATACTGTTGAAGCCATTCTTGCTCATCCTGAAAATGAGAGTTCGTGGAGATATCTGCGCGGACTTTATGCAGGTGACACACACTCATGGATTACTGCTCCTCAAGTTTCTTCTGTCTGCATGAAAGTTTTGAGCGGTAAAAGTCACTATGTATTTGCTTTGAGCACTCTGTTGGATCTTCTCTGCCATGGTTTCCAATCAAGCCAAGAGTTAAGAGATGCTGTTAATGCTTTGAGGATACCCGACGGTCCAACCGATTCCAACCTAGCAAAAACTGTGTGCTTAATTTTGGAACGTGTCGATCCTATGCGAGTTAACTATTGGCTCTGGCAGAAGAGCAAGCTTCCTCAGTAA MRESELNYTVEAILAHPENESSWRYLRGLYAGDTHSWITAPQVSSVCMKVLSGKSHYVFALSTLLDLLCHGFQSSQELRDAVNALRIPDGPTDSNLAKTVCLILERVDPMRVNYWLWQKSKLPQ Homology
BLAST of Lag0021739 vs. NCBI nr
Match: XP_022145198.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Momordica charantia]) HSP 1 Score: 234.6 bits (597), Expect = 4.7e-58 Identity = 110/124 (88.71%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Lag0021739 vs. NCBI nr
Match: XP_023527416.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita pepo subsp. pepo]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0021739 vs. NCBI nr
Match: XP_022955792.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Cucurbita moschata]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0021739 vs. NCBI nr
Match: XP_038900826.1 (protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [Benincasa hispida]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 108/125 (86.40%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Lag0021739 vs. NCBI nr
Match: KAG6582046.1 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 224.2 bits (570), Expect = 6.3e-55 Identity = 106/125 (84.80%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0021739 vs. ExPASy Swiss-Prot
Match: O24304 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pisum sativum OX=3888 GN=FTA PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 1.2e-35 Identity = 71/125 (56.80%), Postives = 99/125 (79.20%), Query Frame = 0
BLAST of Lag0021739 vs. ExPASy Swiss-Prot
Match: Q9LX33 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Arabidopsis thaliana OX=3702 GN=FTA PE=1 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 7.1e-33 Identity = 70/123 (56.91%), Postives = 89/123 (72.36%), Query Frame = 0
BLAST of Lag0021739 vs. ExPASy Swiss-Prot
Match: P93227 (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Solanum lycopersicum OX=4081 GN=FTA PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 8.7e-31 Identity = 67/120 (55.83%), Postives = 80/120 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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