Lag0021738 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCTCGACTCATCTCTCCTCAAGACCCAGTTCCCATCATTGTATAACTTGTCTCTCAAAAAGGAGGCTACGATTGCTGAATTATGGAATCCGATTAATGGCTCTTGGAACTTACAATTGAGAAGGAACCTTACAGAAGAGGATATTCTTGAGTGGGCTTCTTTATCTCACAATCTCACCAATTTCTCCATAAATAATACTGAAGACTCTTGGTTTTGGTGCCTTGGAAATTGTGGAGAAATGCCTTGGAAATTATGGATTTTTCTCCACAGGAACTCTCACAAGACATTTGGCTTCCTCTTCACAGCACAACAGTACTAATCTCTATGGACAGTTGTGGAAGGGCCCTATGCTGAAAAAAGTTAAATTTTTTGTTTGGGAGCTTAGTCATGCTTGTATCAATACTGCGGATATGATTCAAAGAAAAAATCATGCATCTAATCTATCTCCCAGCTGCTGTATCATGTGTTACAAAGCCCAAGAGACTCAAGCTCACTTATTTAACTACTGTGATTTTGCATCAGCCTTTTGGAGCTATCTTCAACAAGCCTTTGGATGGCAATGTGCCTGGCCTGCGGATATCCACACTCTTCTATCTTTTGCCATTGTTGGTCATCCCTTTAGAAAGGACAAAAAATCATCTGGCTGA ATGTGGCTCGACTCATCTCTCCTCAAGACCCAGTTCCCATCATTGTATAACTTGTCTCTCAAAAAGGAGGCTACGATTGCTGAATTATGGAATCCGATTAATGGCTCTTGGAACTTACAATTGAGAAGGAACCTTACAGAAGAGGATATTCTTGAGTGGGCTTCTTTATCTCACAATCTCACCAATTTCTCCATAAATAATACTGAAGACTCTTGGTTTTGGTGCCTTGGAAATTGTGGAGAAATGCCTTGGAAATTATGGATTTTTCTCCACAGGAACTCTCACAAGACATTTGGCTTCCTCTTCACAGCACAACATCATGCTTGTATCAATACTGCGGATATGATTCAAAGAAAAAATCATGCATCTAATCTATCTCCCAGCTGCTGTATCATGTGTTACAAAGCCCAAGAGACTCAAGCTCACTTATTTAACTACTGTGATTTTGCATCAGCCTTTTGGAGCTATCTTCAACAAGCCTTTGGATGGCAATGTGCCTGGCCTGCGGATATCCACACTCTTCTATCTTTTGCCATTGTTGGTCATCCCTTTAGAAAGGACAAAAAATCATCTGGCTGA ATGTGGCTCGACTCATCTCTCCTCAAGACCCAGTTCCCATCATTGTATAACTTGTCTCTCAAAAAGGAGGCTACGATTGCTGAATTATGGAATCCGATTAATGGCTCTTGGAACTTACAATTGAGAAGGAACCTTACAGAAGAGGATATTCTTGAGTGGGCTTCTTTATCTCACAATCTCACCAATTTCTCCATAAATAATACTGAAGACTCTTGGTTTTGGTGCCTTGGAAATTGTGGAGAAATGCCTTGGAAATTATGGATTTTTCTCCACAGGAACTCTCACAAGACATTTGGCTTCCTCTTCACAGCACAACATCATGCTTGTATCAATACTGCGGATATGATTCAAAGAAAAAATCATGCATCTAATCTATCTCCCAGCTGCTGTATCATGTGTTACAAAGCCCAAGAGACTCAAGCTCACTTATTTAACTACTGTGATTTTGCATCAGCCTTTTGGAGCTATCTTCAACAAGCCTTTGGATGGCAATGTGCCTGGCCTGCGGATATCCACACTCTTCTATCTTTTGCCATTGTTGGTCATCCCTTTAGAAAGGACAAAAAATCATCTGGCTGA MWLDSSLLKTQFPSLYNLSLKKEATIAELWNPINGSWNLQLRRNLTEEDILEWASLSHNLTNFSINNTEDSWFWCLGNCGEMPWKLWIFLHRNSHKTFGFLFTAQHHACINTADMIQRKNHASNLSPSCCIMCYKAQETQAHLFNYCDFASAFWSYLQQAFGWQCAWPADIHTLLSFAIVGHPFRKDKKSSG Homology
BLAST of Lag0021738 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 3.2e-13 Identity = 55/195 (28.21%), Postives = 84/195 (43.08%), Query Frame = 0
BLAST of Lag0021738 vs. NCBI nr
Match: XP_026453629.1 (uncharacterized protein LOC113354505 [Papaver somniferum]) HSP 1 Score: 85.1 bits (209), Expect = 7.1e-13 Identity = 58/180 (32.22%), Postives = 80/180 (44.44%), Query Frame = 0
BLAST of Lag0021738 vs. NCBI nr
Match: KAA0056839.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYJ99342.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 82.8 bits (203), Expect = 3.5e-12 Identity = 55/181 (30.39%), Postives = 84/181 (46.41%), Query Frame = 0
BLAST of Lag0021738 vs. NCBI nr
Match: KAA0044451.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11 Identity = 54/195 (27.69%), Postives = 83/195 (42.56%), Query Frame = 0
BLAST of Lag0021738 vs. NCBI nr
Match: TYK29578.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11 Identity = 54/195 (27.69%), Postives = 83/195 (42.56%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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