Lag0021715 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAACAGTACGTACAACCCCTCTCTTTCTTCTCCCGCTCATCGTCGTGCATTTGAATTTTTATTTCGCGGTATGATTCTGGGCTTGTTTTCGTTGTTGATGAATGCGTTTGTGGTGGTGCAGCGATGGCTAGGTCTTTTCTGCAGGTAGCTGCTACGGAAGAGGTGGCTTCCCCCTCCGAGTGGTTCAGATTGAAGGATTGGTAATTTTCTCCTCTTCTTTTTCTTATTTTGCGTTTCATTCGATTCGGAAGCGTGGAGACTAATTAGTTCTTCCAACGCATAAACAAAACGGAAGCTTTTATTTTATCCGTTCTGTAATTTTTCGATAACCCAGTTATTTGAGATGCCCTTTTGTTATTCGTTCAAAAGATGTTTGTTTTCTTAGTGGTTGGGACGGAGTATTTAGCGTTATGCAACCCTGTTTTCCATTTGAAGCGTGATATTTAGTGAGCCTTCCAATTTGGATGGAGAATTGTTGTACTATGGGTTCTGCTTCTTACCTGTTGTGACTATTTTTTGCGAAGGGAAAAAATAATTATATTTGTCTTTGGTACGTTATATAGGGCAAGCAATTAGTGAAGACAAATATTAACTTTTGTCAACTTCTTGAATTACTTGATCTTCTATCCCTATATTAAGGATAAAACCCTTTGTATCGTCCCTACAGGTTATATTGAAGATAATCAAGCACTGCAAGGAGTTTTCACCAGCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGGTATGATTAGGCAGTTACTTTCATGTTGTTTAATGGTTCGGGGTTATTTTTTTCTACCCTTGAAAATTTATTTTTAATTTATTAACATGAATCTTTTAGACTCGGGAGGAGGATGAGGAGATTGAAGCAGATGGTGCTAATTACCAACTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAATACCGTTGGATGGTAAGCTTAGTTTTATAATAGTGCATTTATATGGAGGACTTGGCATTATTAGGAGGCAAATAATGTGTATACATATGTATGTTTGTGTTCATATGCATTCACTTGTTTTCTGATTGTTTTTTGTTACTCTAGATGTGCGGTTATTATTATTTTTTTTAAATTAAATTATTTATTTTTATCATTTAATTGGTTCTATTTTTCTTGTATCTAATTATTAGAGATTATGAGCCTTGCCTGGATACGGACATCCTATTGTGAATTTAGGATATATAAATGTAAGGTTGATGCTTCATTTGAGTGTTCTTTTGCTTTGGCTACTTGAACGCCAAAAGAAGTGTTCTGTCCCTTGGGCTTAATGATATATATTAATTATTAACTCACCATGTTACGTTGGTGGAGCTCTTTGGCTGAGTTGGTTGACATTTTTGATAGATAGATCATAGATGGTAACTAATTGCTTCCCATTGTTCCTGTGGAGTGGTTGACATTTTACTTAATCGTATTCAGGTATCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATCGAGACCTTTATGAATTATCAGGTATTAGTTTAGTCATTCATTCTCTATTTATATGTTTTTCTTCGTAGCATTCTTGTAATGTCTTTTCTATTATTTGATAATAATTTCCACACTATATTTCTTCCTTAACTCAGAAATTGAAACTTTTTAGAGCCTTGTATGTGTTTGGGTCTTCATAATTGGAAGCTTTTCTGATTAACTATCAGAGTTTTTGAGTTTGTCTCTAACTATTGTGACCACTTGTGGAAAATCTTGTCAAAAAACCATGTTAATATGATATCTACTATTTATATCAATGCTTCCATCTTGATTCAGAGAGGAAGGAAGCACTTCTCCCAGTCCCTTGCTTCCTTCTTGAATAAGGAGGAAGGAAAGGAAGATCTTTATTCCTTCTGTACTGCCTTTGAAAGGCCAACAGTATTTTGTTTCAAATTAAAAGATAAGGAAGAAATCTTTATGTGGATAATTGAATTGGAGAATGGAAGTAAATATAGTTGAAGTGTAGCAAATGATAAGTGGAGAAAGAGAGATGGAAAGTCAATTTGTATGTATCTCTTTTGAGAGAGTGGTGGTGTGATTTTGAAAATTTTGTTAGTAATAAGAGATTTTTTTGTAAAAGAAAGGGAATTTGATGTAAAATTTCTATCTAGGGCATATTGGGAAACTTCATCTTTGAAGCGAGCTTTGACCCAACCCCATTACCCAATTTTAAATGTAAAATTCATGATCTAAAAATAACTTTTATTTTTAATTTGAACACTATTGAAACATGACCATGTCTTTTAATGATGTTTTTCAAATTATAATTGTATTTGTTTCTTGCTGTCTTTTAGGTTTCGATGGCTCCTGGTTGTTGCTACTAAGAGATTTTTGTGATTTTTCTTTATTTTTTATTACCAAAAATTTATGCGTCCTGTAATTCTTTTGAGGCACTTTTTGTTGGGTTTGGCCTGTGTTTTTTCTGGCCTTCTCTTTTATACTTTCATCATTCTTAATGAAAGGTGATAGTTGCTTTCTTATGAAAAAATTATTTATTTAACACAAATATATGTTAATAAACATGTATTTGTTGTGTCTGGCTGAATATTCTAGAAAATATTGTGTGAATGTGCTTCTCTGTTCAGCTTGTTGCCATGTTCTTTTTGCTCAGTGTAGCCTCCTCCCGGCCTAATTTGTCTCAAGAAAATTATGATTTGAAATGACTTAAACAAGATATATCTGACTCATCAATAATTTACAAGTTTTAGGGTGTCACTTGTATAGAGCTTCCTGATTGACCTAGTTCAACTCCATTGATTGGGTTTCTTTTTTTACGTTGTGGCACGTTTTTTCTTCTTCTTGTGTTCACTCTGTAGGTCATGCTATTAAAACATAATTTTGCAGGAAAATATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGATCTAATCAAGGTGTCTTGGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGCAACAACTTTACAGGAGAAAAGTACGTAATTTCATTACTATTATTCTTTTAAGTCATGTTGCTAATTGGAAATATCTGTCTTTCTGCAATAGGTTGAGGGAAAAGAACTTGTCGTGGGTGGATATTTTTGAAGAAATACCTGTAAGTCACTTGGTCCTGCATCTGATCATTTTCATAAGGAAAGATCTGTCTGTAGCCATTTTTCTTGTATGGCATTGGAGATTATTGTAAAAGTTGATAGAAAGATTATGTTCTGTTCCTTGTTTGTTGCTTTTCCTGTGGTTAAAATGTGGTTTAAATCTTATTTTGGCATTTGGACTTTCATACACTTCCATGCCTTTTTTGGTTTTGGTTCCTAAACTTTCTAATGCCCTATTTTAGTCTCAACTTTTCCACTGTTTTATTCTGGTAACCATACTTCGTATAGAAAGATATTTTAGTCTATGCTGTTAATTTTTCATGGTTCAATTAACAAACAAAAAATCAACCCTTTGCTTTCAACATTTGGCTTCGTGAATATATACATATGTTTGCTACCCAAATGATCAAAATGAATTTTTATGCACAATTCAAGGACTCAAGTAAAATATTTAATTTTATCAAACAAAAAAGGTGAAATATTTTCTAGGGGTCAAATTCTGATAAGCACGAAAGTTTATTAAAATAAGATTGAAATCCCGTTTGTGTTATTTTTTCCTTGATCAGTTTTTGGATCCTATTTCCTTGTCTGGATCTTACTTACTGATGATTGGTCAAAAGTTATTTTAGGTTTACAGACTTTTTAAGTGTACAATATAACACAATTATCGTCTTATTTCTTGTATTTTTTCAGATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGGTAAAACATGACTTGTGGGTCTCTCATTGTAGGTGATCTAAATTTTTCATCTCTCTTCTTTTTATTGATTAGATCATTACTATTTCAGTGTGATTATGACCGCCTGCAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCTGTGGAGCAGCAGAAGGTTTGTGTTCTCTGTTGAAGTTCCTGTTTTTTATGATGGTTATGTGCACAGTATAATTCAATCTTTCTCTAGTTTCTGTTTTATGATTGCTCATGGGACAATATAATTCAATTTTCTTTTTCTAGTTCCAATTCTATTATCGGAGCCTGACCCGTCAGCAAGCTCAGCAGCAGGCATGGCTTCAGAAGAGAAGGTGAATATCGTTTGCACATTGAAGACTGTATATTTTTCCTTATTAAATAATCGTCGATTCTATGTTATTTGTGTGCATTTCTGTTACATTAATGACCCTAGTTGCAAATTCTTTCTTATGTTTCGGTTACATTTGTTGGCATCGTAATTATTTATGATCACAAGGGGGAAACTGTTGTACGATGCATTTGCACGTTCATAAATTTCTGGGATTCTATTTCGTAGGGCCGAGAACATGACGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAAGATCCTGCAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTACTGCAACCAAATTAACGGGTATGTTGCTGCCTACTACCAATCAATCTTATTGTCCAAAAATGAATATCATTCTCTTTTCTGATACCTTGGAGAAGCTAATAGGTTTTTGTTCAATGTCCCGAGAGTTGAATAATATTTTGTGTATTGAAATGTTTCAGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAA ATGGCAAACACGATGGCTAGGTCTTTTCTGCAGGTAGCTGCTACGGAAGAGGTGGCTTCCCCCTCCGAGTGGTTCAGATTGAAGGATTGGATAAAACCCTTTGTATCGTCCCTACAGGTTATATTGAAGATAATCAAGCACTGCAAGGAGTTTTCACCAGCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCAGATGGTGCTAATTACCAACTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAATACCGTTGGATGGTATCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATCGAGACCTTTATGAATTATCAGGAAAATATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGATCTAATCAAGGTGTCTTGGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGCAACAACTTTACAGGAGAAAAGTTGAGGGAAAAGAACTTGTCGTGGGTGGATATTTTTGAAGAAATACCTATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCTGTGGAGCAGCAGAAGTTCCAATTCTATTATCGGAGCCTGACCCGTCAGCAAGCTCAGCAGCAGGCATGGCTTCAGAAGAGAAGGGCCGAGAACATGACGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAAGATCCTGCAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTACTGCAACCAAATTAACGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAA ATGGCAAACACGATGGCTAGGTCTTTTCTGCAGGTAGCTGCTACGGAAGAGGTGGCTTCCCCCTCCGAGTGGTTCAGATTGAAGGATTGGATAAAACCCTTTGTATCGTCCCTACAGGTTATATTGAAGATAATCAAGCACTGCAAGGAGTTTTCACCAGCCCTTGTGACTGGGCAACTTCTTGGGTTAGATGTTGGTAGCGTTCTTGAAGTCACTAATTGCTTTCCCTTCCCGACTCGGGAGGAGGATGAGGAGATTGAAGCAGATGGTGCTAATTACCAACTTGAAATGATGAGATGTCTGAGAGAAGTCAATGTTGACAATAATACCGTTGGATGGTATCAGTCAACCTTCTTAGGTTCATATCAGACTGTAGAGCTGATCGAGACCTTTATGAATTATCAGGAAAATATTAGGCGGTGTGTCTGCATAATTTATGACCCATCAAGATCTAATCAAGGTGTCTTGGCTCTCAAAGCATTGAAGCTTTCAGATTCTTTTATGGAGCTTTACCGCAGCAACAACTTTACAGGAGAAAAGTTGAGGGAAAAGAACTTGTCGTGGGTGGATATTTTTGAAGAAATACCTATCAAAGTTTCAAACTCAGCCCTCATTAGTGCTTTTATGACGGAGCTTGAAGCTGACTCTCCAGTCACCCAGTGTGATTATGACCGCCTGCAACTTTCAACTAATCCATTTATGGAGAGGAATGTGGAATTTCTGATTGAATGTATGGATGATTTGTCTGTGGAGCAGCAGAAGTTCCAATTCTATTATCGGAGCCTGACCCGTCAGCAAGCTCAGCAGCAGGCATGGCTTCAGAAGAGAAGGGCCGAGAACATGACGAGGAAGGCAGCAGGAGAAGAACCTCTCCCTGAGGAAGATCCTGCAAACCCCATCTTTAAACCACTCCCTGAGCCATCACGTTTGGATAGCTATCTCATAACGAATCAAATAGCAAACTACTGCAACCAAATTAACGGGGTTGCTGGACAGAGTTTCAACAGACTTCATTTGATGAAGGCTTTGCATGACAATTAA MANTMARSFLQVAATEEVASPSEWFRLKDWIKPFVSSLQVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEADSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQAWLQKRRAENMTRKAAGEEPLPEEDPANPIFKPLPEPSRLDSYLITNQIANYCNQINGVAGQSFNRLHLMKALHDN Homology
BLAST of Lag0021715 vs. NCBI nr
Match: XP_022145220.1 (eukaryotic translation initiation factor 3 subunit H [Momordica charantia]) HSP 1 Score: 642.9 bits (1657), Expect = 1.6e-180 Identity = 325/346 (93.93%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Lag0021715 vs. NCBI nr
Match: XP_038880772.1 (eukaryotic translation initiation factor 3 subunit H [Benincasa hispida]) HSP 1 Score: 641.3 bits (1653), Expect = 4.6e-180 Identity = 325/346 (93.93%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Lag0021715 vs. NCBI nr
Match: XP_022932637.1 (eukaryotic translation initiation factor 3 subunit H [Cucurbita moschata] >XP_022972109.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita maxima] >XP_023539151.1 eukaryotic translation initiation factor 3 subunit H [Cucurbita pepo subsp. pepo] >KAG6597643.1 Eukaryotic translation initiation factor 3 subunit H, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 638.6 bits (1646), Expect = 3.0e-179 Identity = 323/346 (93.35%), Postives = 327/346 (94.51%), Query Frame = 0
BLAST of Lag0021715 vs. NCBI nr
Match: XP_008453973.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit H [Cucumis melo] >TYK16981.1 eukaryotic translation initiation factor 3 subunit H [Cucumis melo var. makuwa]) HSP 1 Score: 637.9 bits (1644), Expect = 5.1e-179 Identity = 322/346 (93.06%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Lag0021715 vs. NCBI nr
Match: XP_004152102.1 (eukaryotic translation initiation factor 3 subunit H [Cucumis sativus] >KGN53080.1 hypothetical protein Csa_015119 [Cucumis sativus]) HSP 1 Score: 637.9 bits (1644), Expect = 5.1e-179 Identity = 322/346 (93.06%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy Swiss-Prot
Match: Q9C5Z2 (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana OX=3702 GN=TIF3H1 PE=1 SV=2) HSP 1 Score: 549.3 bits (1414), Expect = 3.2e-155 Identity = 269/343 (78.43%), Postives = 303/343 (88.34%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy Swiss-Prot
Match: A7SA47 (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis OX=45351 GN=v1g168210 PE=3 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 7.4e-72 Identity = 138/307 (44.95%), Postives = 209/307 (68.08%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy Swiss-Prot
Match: Q54UD0 (Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum OX=44689 GN=eif3H PE=3 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.2e-69 Identity = 140/305 (45.90%), Postives = 202/305 (66.23%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy Swiss-Prot
Match: Q5PPY6 (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis OX=8355 GN=eif3h PE=2 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 5.7e-64 Identity = 129/308 (41.88%), Postives = 202/308 (65.58%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy Swiss-Prot
Match: Q6P381 (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis OX=8364 GN=eif3h PE=2 SV=1) HSP 1 Score: 244.2 bits (622), Expect = 2.2e-63 Identity = 129/308 (41.88%), Postives = 201/308 (65.26%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy TrEMBL
Match: A0A6J1CTU8 (Eukaryotic translation initiation factor 3 subunit H OS=Momordica charantia OX=3673 GN=LOC111014724 PE=3 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 7.7e-181 Identity = 325/346 (93.93%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy TrEMBL
Match: A0A6J1IAJ1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita maxima OX=3661 GN=LOC111470742 PE=3 SV=1) HSP 1 Score: 638.6 bits (1646), Expect = 1.5e-179 Identity = 323/346 (93.35%), Postives = 327/346 (94.51%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy TrEMBL
Match: A0A6J1EXB6 (Eukaryotic translation initiation factor 3 subunit H OS=Cucurbita moschata OX=3662 GN=LOC111439131 PE=3 SV=1) HSP 1 Score: 638.6 bits (1646), Expect = 1.5e-179 Identity = 323/346 (93.35%), Postives = 327/346 (94.51%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy TrEMBL
Match: A0A5D3CYC1 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001220 PE=3 SV=1) HSP 1 Score: 637.9 bits (1644), Expect = 2.5e-179 Identity = 322/346 (93.06%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Lag0021715 vs. ExPASy TrEMBL
Match: A0A0A0KTY9 (Eukaryotic translation initiation factor 3 subunit H OS=Cucumis sativus OX=3659 GN=Csa_4G015700 PE=3 SV=1) HSP 1 Score: 637.9 bits (1644), Expect = 2.5e-179 Identity = 322/346 (93.06%), Postives = 330/346 (95.38%), Query Frame = 0
BLAST of Lag0021715 vs. TAIR 10
Match: AT1G10840.1 (translation initiation factor 3 subunit H1 ) HSP 1 Score: 549.3 bits (1414), Expect = 2.2e-156 Identity = 269/343 (78.43%), Postives = 303/343 (88.34%), Query Frame = 0
BLAST of Lag0021715 vs. TAIR 10
Match: AT1G10840.2 (translation initiation factor 3 subunit H1 ) HSP 1 Score: 433.3 bits (1113), Expect = 1.8e-121 Identity = 208/250 (83.20%), Postives = 234/250 (93.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|